RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 MAST3O60307 1309 aa12.62□□□□□ -0.39
HDLBP-206ENST00000417540 PDS5AQ29RF7 1337 aaKnown RBP12.62□□□□□ -0.39
HDLBP-206ENST00000417540 LDHBP07195 334 aaKnown RBP12.61□□□□□ -0.39
HDLBP-206ENST00000417540 KIF23Q02241 960 aaPredicted RBP12.61□□□□□ -0.39
HDLBP-206ENST00000417540 CDC42EP5Q6NZY7 148 aa12.61□□□□□ -0.39
HDLBP-206ENST00000417540 ADGRA1Q86SQ6 560 aa12.61□□□□□ -0.39
HDLBP-206ENST00000417540 DZIP1Q86YF9 867 aaKnown RBP12.61□□□□□ -0.39
HDLBP-206ENST00000417540 AIDAQ96BJ3 306 aa12.61□□□□□ -0.39
HDLBP-206ENST00000417540 DDX4Q9NQI0 724 aaKnown RBP12.61□□□□□ -0.39
HDLBP-206ENST00000417540 PIH1D3Q9NQM4 214 aaKnown RBP12.61□□□□□ -0.39
HDLBP-206ENST00000417540 FAM198AQ9UFP1 575 aa12.61□□□□□ -0.39
HDLBP-206ENST00000417540 DDX19BQ9UMR2 479 aa12.61□□□□□ -0.39
HDLBP-206ENST00000417540 HDAC5Q9UQL6 1122 aa12.61□□□□□ -0.39
HDLBP-206ENST00000417540 MKI67P46013 3256 aaKnown RBP12.61□□□□□ -0.39
HDLBP-206ENST00000417540 MROH7-TTC4A0A0A0MT08 1334 aa12.61□□□□□ -0.39
HDLBP-206ENST00000417540 MYO1BO43795 1136 aa12.6□□□□□ -0.39
HDLBP-206ENST00000417540 BTDP43251 543 aa12.6□□□□□ -0.39
HDLBP-206ENST00000417540 MECOMQ03112 1051 aa12.6□□□□□ -0.39
HDLBP-206ENST00000417540 TCP10Q12799 353 aa12.6□□□□□ -0.39
HDLBP-206ENST00000417540 ZFPM1Q8IX07 1006 aa12.6□□□□□ -0.39
HDLBP-206ENST00000417540 SPATA5Q8NB90 893 aa12.6□□□□□ -0.39
HDLBP-206ENST00000417540 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.6□□□□□ -0.39
HDLBP-206ENST00000417540 AKAP2Q9Y2D5 859 aa12.6□□□□□ -0.39
HDLBP-206ENST00000417540 LOC285556D6RIA3 1793 aa12.6□□□□□ -0.39
HDLBP-206ENST00000417540 BAZ2AQ9UIF9 1905 aaKnown RBP12.6□□□□□ -0.39
HDLBP-206ENST00000417540 SEMA3EO15041 775 aa12.59□□□□□ -0.39
HDLBP-206ENST00000417540 SMARCA5O60264 1052 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-206ENST00000417540 ZAP70P43403 619 aa12.59□□□□□ -0.39
HDLBP-206ENST00000417540 NOGQ13253 232 aa12.59□□□□□ -0.39
HDLBP-206ENST00000417540 TTC39AQ5SRH9 613 aa12.59□□□□□ -0.39
HDLBP-206ENST00000417540 AACSQ86V21 672 aa12.59□□□□□ -0.39
HDLBP-206ENST00000417540 CRBNQ96SW2 442 aa12.59□□□□□ -0.39
HDLBP-206ENST00000417540 GNL3LQ9NVN8 582 aaKnown RBP12.59□□□□□ -0.39
HDLBP-206ENST00000417540 PPP2R3BQ9Y5P8 575 aa12.59□□□□□ -0.39
HDLBP-206ENST00000417540 CYP2E1P05181 493 aaPredicted RBP12.58□□□□□ -0.4
HDLBP-206ENST00000417540 FKBP1BP68106 108 aa12.58□□□□□ -0.4
HDLBP-206ENST00000417540 HDLBPQ00341 1268 aaKnown RBP12.58□□□□□ -0.4
HDLBP-206ENST00000417540 VGLL4Q14135 290 aa12.58□□□□□ -0.4
HDLBP-206ENST00000417540 LDLRAD1Q5T700 205 aa12.58□□□□□ -0.4
HDLBP-206ENST00000417540 HHIPL2Q6UWX4 724 aa12.58□□□□□ -0.4
HDLBP-206ENST00000417540 SH3BP5LQ7L8J4 393 aa12.58□□□□□ -0.4
HDLBP-206ENST00000417540 RHPN1Q8TCX5 695 aa12.58□□□□□ -0.4
HDLBP-206ENST00000417540 NSUN4Q96CB9 384 aaKnown RBP12.58□□□□□ -0.4
HDLBP-206ENST00000417540 EDC3Q96F86 508 aaKnown RBP12.58□□□□□ -0.4
HDLBP-206ENST00000417540 WNK4Q96J92 1243 aa12.58□□□□□ -0.4
HDLBP-206ENST00000417540 ANTXR1Q9H6X2 564 aa12.58□□□□□ -0.4
HDLBP-206ENST00000417540 ELP3Q9H9T3 547 aa12.58□□□□□ -0.4
HDLBP-206ENST00000417540 SUGT1Q9Y2Z0 365 aa12.58□□□□□ -0.4
HDLBP-206ENST00000417540 MYH8P13535 1937 aa12.58□□□□□ -0.4
HDLBP-206ENST00000417540 FAM196BA6NMK8 535 aa12.57□□□□□ -0.4
HDLBP-206ENST00000417540 USP2O75604 605 aaPredicted RBP12.57□□□□□ -0.4
HDLBP-206ENST00000417540 WDHD1O75717 1129 aaPredicted RBP12.57□□□□□ -0.4
HDLBP-206ENST00000417540 CHGBP05060 677 aa12.57□□□□□ -0.4
HDLBP-206ENST00000417540 NF2P35240 595 aa12.57□□□□□ -0.4
HDLBP-206ENST00000417540 RGS3P49796 1198 aa12.57□□□□□ -0.4
HDLBP-206ENST00000417540 MMP14P50281 582 aa12.57□□□□□ -0.4
HDLBP-206ENST00000417540 RHBDL3P58872 404 aa12.57□□□□□ -0.4
HDLBP-206ENST00000417540 PICALMQ13492 652 aa12.57□□□□□ -0.4
HDLBP-206ENST00000417540 MAP3K11Q16584 847 aa12.57□□□□□ -0.4
HDLBP-206ENST00000417540 GORABQ5T7V8 394 aa12.57□□□□□ -0.4
HDLBP-206ENST00000417540 TSHZ3Q63HK5 1081 aa12.57□□□□□ -0.4
HDLBP-206ENST00000417540 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.57□□□□□ -0.4
HDLBP-206ENST00000417540 CSRNP1Q96S65 589 aa12.57□□□□□ -0.4
HDLBP-206ENST00000417540 GPR108Q9NPR9 543 aa12.57□□□□□ -0.4
HDLBP-206ENST00000417540 SNCAIPQ9Y6H5 919 aa12.57□□□□□ -0.4
HDLBP-206ENST00000417540 CCDC85CA6NKD9 419 aa12.56□□□□□ -0.4
HDLBP-206ENST00000417540 ZBTB22O15209 634 aa12.56□□□□□ -0.4
HDLBP-206ENST00000417540 MAP2K1Q02750 393 aaPredicted RBP12.56□□□□□ -0.4
HDLBP-206ENST00000417540 TNFAIP1Q13829 316 aa12.56□□□□□ -0.4
HDLBP-206ENST00000417540 PDE3AQ14432 1141 aa12.56□□□□□ -0.4
HDLBP-206ENST00000417540 SLC4A8Q2Y0W8 1093 aa12.56□□□□□ -0.4
HDLBP-206ENST00000417540 SLFNL1Q499Z3 407 aa12.56□□□□□ -0.4
HDLBP-206ENST00000417540 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.56□□□□□ -0.4
HDLBP-206ENST00000417540 ARMC9Q7Z3E5 817 aa12.56□□□□□ -0.4
HDLBP-206ENST00000417540 R3HDMLQ9H3Y0 253 aa12.56□□□□□ -0.4
HDLBP-206ENST00000417540 TMOD2Q9NZR1 351 aa12.56□□□□□ -0.4
HDLBP-206ENST00000417540 RAI14Q9P0K7 980 aa12.56□□□□□ -0.4
HDLBP-206ENST00000417540 PCDHB15Q9Y5E8 787 aa12.56□□□□□ -0.4
HDLBP-206ENST00000417540 DDTLA6NHG4 134 aaPredicted RBP12.55□□□□□ -0.4
HDLBP-206ENST00000417540 IGF2BP3O00425 579 aaKnown RBP eCLIP12.55□□□□□ -0.4
HDLBP-206ENST00000417540 INPP5BP32019 993 aa12.55□□□□□ -0.4
HDLBP-206ENST00000417540 MAP2K2P36507 400 aa12.55□□□□□ -0.4
HDLBP-206ENST00000417540 SPRYD7Q5W111 196 aa12.55□□□□□ -0.4
HDLBP-206ENST00000417540 ERICH6Q7L0X2 663 aa12.55□□□□□ -0.4
HDLBP-206ENST00000417540 MIGA2Q7L4E1 593 aa12.55□□□□□ -0.4
HDLBP-206ENST00000417540 CCDC84Q86UT8 332 aaPredicted RBP12.55□□□□□ -0.4
HDLBP-206ENST00000417540 SH3RF3Q8TEJ3 882 aaPredicted RBP12.55□□□□□ -0.4
HDLBP-206ENST00000417540 WRNIP1Q96S55 665 aa12.55□□□□□ -0.4
HDLBP-206ENST00000417540 USP40Q9NVE5 1235 aa12.55□□□□□ -0.4
HDLBP-206ENST00000417540 RNF186Q9NXI6 227 aa12.55□□□□□ -0.4
HDLBP-206ENST00000417540 UQCRFS1P1P0C7P4 283 aa12.54□□□□□ -0.4
HDLBP-206ENST00000417540 MS4A1P11836 297 aa12.54□□□□□ -0.4
HDLBP-206ENST00000417540 DYNLL1P63167 89 aaKnown RBP12.54□□□□□ -0.4
HDLBP-206ENST00000417540 EVX2Q03828 476 aa12.54□□□□□ -0.4
HDLBP-206ENST00000417540 SHROOM1Q2M3G4 852 aaPredicted RBP12.54□□□□□ -0.4
HDLBP-206ENST00000417540 ZGPATQ8N5A5 531 aaKnown RBP12.54□□□□□ -0.4
HDLBP-206ENST00000417540 ZKSCAN4Q969J2 545 aaPredicted RBP12.54□□□□□ -0.4
HDLBP-206ENST00000417540 OPTNQ96CV9 577 aa12.54□□□□□ -0.4
HDLBP-206ENST00000417540 AATFQ9NY61 560 aaKnown RBP eCLIP12.54□□□□□ -0.4
HDLBP-206ENST00000417540 COL2A1P02458 1487 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms