RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 CTDNEP1O95476 244 aa22.66■■□□□ 1.22
RAB3IP-205ENST00000417413 DYNLL1P63167 89 aaKnown RBP22.66■■□□□ 1.22
RAB3IP-205ENST00000417413 CTDSPL2Q05D32 466 aa22.66■■□□□ 1.22
RAB3IP-205ENST00000417413 TMED8Q6PL24 325 aaPredicted RBP22.66■■□□□ 1.22
RAB3IP-205ENST00000417413 TMC4Q7Z404 712 aa22.66■■□□□ 1.22
RAB3IP-205ENST00000417413 ZNF804AQ7Z570 1209 aa22.66■■□□□ 1.22
RAB3IP-205ENST00000417413 GPR101Q96P66 508 aaPredicted RBP22.66■■□□□ 1.22
RAB3IP-205ENST00000417413 BRPF3Q9ULD4 1205 aa22.66■■□□□ 1.22
RAB3IP-205ENST00000417413 BAZ2AQ9UIF9 1905 aaKnown RBP22.66■■□□□ 1.22
RAB3IP-205ENST00000417413 UFL1O94874 794 aa22.65■■□□□ 1.22
RAB3IP-205ENST00000417413 PRDX5P30044 214 aa22.65■■□□□ 1.22
RAB3IP-205ENST00000417413 TDO2P48775 406 aa22.65■■□□□ 1.22
RAB3IP-205ENST00000417413 NSUN7Q8NE18 718 aaKnown RBP22.65■■□□□ 1.22
RAB3IP-205ENST00000417413 INCENPQ9NQS7 918 aa22.65■■□□□ 1.22
RAB3IP-205ENST00000417413 GGA1Q9UJY5 639 aa22.65■■□□□ 1.22
RAB3IP-205ENST00000417413 DDX49Q9Y6V7 483 aaKnown RBP22.65■■□□□ 1.22
RAB3IP-205ENST00000417413 B4E1Z4 1266 aa22.64■■□□□ 1.22
RAB3IP-205ENST00000417413 IGSF3O75054 1194 aa22.64■■□□□ 1.22
RAB3IP-205ENST00000417413 AKNAD1Q5T1N1 836 aa22.64■■□□□ 1.22
RAB3IP-205ENST00000417413 SP8Q8IXZ3 490 aa22.64■■□□□ 1.22
RAB3IP-205ENST00000417413 SDR42E1Q8WUS8 393 aa22.64■■□□□ 1.22
RAB3IP-205ENST00000417413 VPS37CA5D8V6 355 aaPredicted RBP22.64■■□□□ 1.21
RAB3IP-205ENST00000417413 SRGNP10124 158 aa22.64■■□□□ 1.21
RAB3IP-205ENST00000417413 CCT2P78371 535 aaKnown RBP22.64■■□□□ 1.21
RAB3IP-205ENST00000417413 SPTY2D1Q68D10 685 aaPredicted RBP22.64■■□□□ 1.21
RAB3IP-205ENST00000417413 WDR66Q8TBY9 1149 aa22.64■■□□□ 1.21
RAB3IP-205ENST00000417413 STAG1Q8WVM7 1258 aa22.64■■□□□ 1.21
RAB3IP-205ENST00000417413 PPEF1O14829 653 aaPredicted RBP22.63■■□□□ 1.21
RAB3IP-205ENST00000417413 FOXD4L6Q3SYB3 417 aaPredicted RBP22.63■■□□□ 1.21
RAB3IP-205ENST00000417413 FOXD4L3Q6VB84 417 aaPredicted RBP22.63■■□□□ 1.21
RAB3IP-205ENST00000417413 TBC1D16Q8TBP0 767 aa22.63■■□□□ 1.21
RAB3IP-205ENST00000417413 NCOA5Q9HCD5 579 aaKnown RBP22.63■■□□□ 1.21
RAB3IP-205ENST00000417413 POLLQ9UGP5 575 aa22.63■■□□□ 1.21
RAB3IP-205ENST00000417413 ANAPC4Q9UJX5 808 aa22.63■■□□□ 1.21
RAB3IP-205ENST00000417413 HPS5Q9UPZ3 1129 aa22.63■■□□□ 1.21
RAB3IP-205ENST00000417413 JAG2Q9Y219 1238 aa22.63■■□□□ 1.21
RAB3IP-205ENST00000417413 ATP6V1DQ9Y5K8 247 aa22.63■■□□□ 1.21
RAB3IP-205ENST00000417413 DUOX1Q9NRD9 1551 aa22.62■■□□□ 1.21
RAB3IP-205ENST00000417413 KLF18A0A0U1RQI7 1052 aa22.62■■□□□ 1.21
RAB3IP-205ENST00000417413 SH2B2O14492 632 aaPredicted RBP22.62■■□□□ 1.21
RAB3IP-205ENST00000417413 NPR1P16066 1061 aa22.62■■□□□ 1.21
RAB3IP-205ENST00000417413 CDC37L1Q7L3B6 337 aa22.62■■□□□ 1.21
RAB3IP-205ENST00000417413 CHMP4CQ96CF2 233 aa22.62■■□□□ 1.21
RAB3IP-205ENST00000417413 CNNM2Q9H8M5 875 aa22.62■■□□□ 1.21
RAB3IP-205ENST00000417413 CD209Q9NNX6 404 aa22.62■■□□□ 1.21
RAB3IP-205ENST00000417413 PTPDC1A2A3K4 754 aa22.61■■□□□ 1.21
RAB3IP-205ENST00000417413 IL1R1P14778 569 aa22.61■■□□□ 1.21
RAB3IP-205ENST00000417413 PPARAQ07869 468 aa22.61■■□□□ 1.21
RAB3IP-205ENST00000417413 TMEM87AQ8NBN3 555 aa22.61■■□□□ 1.21
RAB3IP-205ENST00000417413 GPT2Q8TD30 523 aa22.61■■□□□ 1.21
RAB3IP-205ENST00000417413 IGDCC4Q8TDY8 1250 aa22.61■■□□□ 1.21
RAB3IP-205ENST00000417413 TMEM87BQ96K49 555 aa22.61■■□□□ 1.21
RAB3IP-205ENST00000417413 KRT23Q9C075 422 aa22.61■■□□□ 1.21
RAB3IP-205ENST00000417413 NAP1L2Q9ULW6 460 aaPredicted RBP22.61■■□□□ 1.21
RAB3IP-205ENST00000417413 ANGEL1Q9UNK9 670 aaKnown RBP22.61■■□□□ 1.21
RAB3IP-205ENST00000417413 ATP6V0A2Q9Y487 856 aa22.61■■□□□ 1.21
RAB3IP-205ENST00000417413 LAMB1P07942 1786 aa22.61■■□□□ 1.21
RAB3IP-205ENST00000417413 ALDH1B1P30837 517 aa22.6■■□□□ 1.21
RAB3IP-205ENST00000417413 HMGN5P82970 282 aaKnown RBP22.6■■□□□ 1.21
RAB3IP-205ENST00000417413 GIMAP6Q6P9H5 292 aa22.6■■□□□ 1.21
RAB3IP-205ENST00000417413 MFSD6Q6ZSS7 791 aa22.6■■□□□ 1.21
RAB3IP-205ENST00000417413 DDX11Q96FC9 970 aa22.6■■□□□ 1.21
RAB3IP-205ENST00000417413 TMX4Q9H1E5 349 aaPredicted RBP22.6■■□□□ 1.21
RAB3IP-205ENST00000417413 ZSWIM5Q9P217 1185 aa22.6■■□□□ 1.21
RAB3IP-205ENST00000417413 CNPY2Q9Y2B0 182 aa22.6■■□□□ 1.21
RAB3IP-205ENST00000417413 KDM4AO75164 1064 aa22.59■■□□□ 1.21
RAB3IP-205ENST00000417413 USP48Q86UV5 1035 aa22.59■■□□□ 1.21
RAB3IP-205ENST00000417413 MASTLQ96GX5 879 aa22.59■■□□□ 1.21
RAB3IP-205ENST00000417413 MYH2Q9UKX2 1941 aa22.59■■□□□ 1.21
RAB3IP-205ENST00000417413 GOLGA8BA8MQT2 603 aa22.58■■□□□ 1.21
RAB3IP-205ENST00000417413 H0YIN7 160 aa22.58■■□□□ 1.21
RAB3IP-205ENST00000417413 LDHBP07195 334 aaKnown RBP22.58■■□□□ 1.21
RAB3IP-205ENST00000417413 POLD1P28340 1107 aa22.58■■□□□ 1.21
RAB3IP-205ENST00000417413 GRIK5Q16478 980 aa22.58■■□□□ 1.21
RAB3IP-205ENST00000417413 DZIP1Q86YF9 867 aaKnown RBP22.58■■□□□ 1.21
RAB3IP-205ENST00000417413 LY9Q9HBG7 655 aa22.58■■□□□ 1.21
RAB3IP-205ENST00000417413 GDPD2Q9HCC8 539 aa22.58■■□□□ 1.21
RAB3IP-205ENST00000417413 AATFQ9NY61 560 aaKnown RBP eCLIP22.58■■□□□ 1.21
RAB3IP-205ENST00000417413 MYH15Q9Y2K3 1946 aa22.57■■□□□ 1.2
RAB3IP-205ENST00000417413 SGMS1Q86VZ5 419 aa22.57■■□□□ 1.2
RAB3IP-205ENST00000417413 FAM184AQ8NB25 1140 aa22.57■■□□□ 1.2
RAB3IP-205ENST00000417413 MTFR1LQ9H019 292 aa22.57■■□□□ 1.2
RAB3IP-205ENST00000417413 RNF41Q9H4P4 317 aaPredicted RBP22.57■■□□□ 1.2
RAB3IP-205ENST00000417413 SENP2Q9HC62 589 aa22.57■■□□□ 1.2
RAB3IP-205ENST00000417413 FSD2A1L4K1 749 aa22.57■■□□□ 1.2
RAB3IP-205ENST00000417413 MINDY4BA8MYZ0 360 aa22.57■■□□□ 1.2
RAB3IP-205ENST00000417413 DNM1Q05193 864 aaKnown RBP22.57■■□□□ 1.2
RAB3IP-205ENST00000417413 CTR9Q6PD62 1173 aa22.57■■□□□ 1.2
RAB3IP-205ENST00000417413 CRNKL1Q9BZJ0 848 aaKnown RBP22.57■■□□□ 1.2
RAB3IP-205ENST00000417413 C6orf229H3BNL8 230 aa22.56■■□□□ 1.2
RAB3IP-205ENST00000417413 SMIM22K7EJ46 135 aa22.56■■□□□ 1.2
RAB3IP-205ENST00000417413 FDPSP14324 419 aaKnown RBP22.56■■□□□ 1.2
RAB3IP-205ENST00000417413 LIFRP42702 1097 aa22.56■■□□□ 1.2
RAB3IP-205ENST00000417413 TMEM67Q5HYA8 995 aa22.56■■□□□ 1.2
RAB3IP-205ENST00000417413 FERMT3Q86UX7 667 aa22.56■■□□□ 1.2
RAB3IP-205ENST00000417413 MTA3Q9BTC8 594 aa22.56■■□□□ 1.2
RAB3IP-205ENST00000417413 CDK5RAP2Q96SN8 1893 aa22.55■■□□□ 1.2
RAB3IP-205ENST00000417413 MBD3O95983 291 aa22.55■■□□□ 1.2
RAB3IP-205ENST00000417413 NCLP19338 710 aaKnown RBP22.55■■□□□ 1.2
RAB3IP-205ENST00000417413 STYK1Q6J9G0 422 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms