RNA–Protein interactions for RNA: ENST00000416942.2

GTF3AP1-201, Transcript of general transcription factor IIIA pseudogene 1, humanhuman

BASIC

Gene GTF3AP1, Length 1,004 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3AP1-201ENST00000416942 RGS17Q9UGC6 210 aaPredicted RBP9.76□□□□□ -0.85
GTF3AP1-201ENST00000416942 TRAPPC8Q9Y2L5 1435 aa9.75□□□□□ -0.85
GTF3AP1-201ENST00000416942 TMEM238LA0A1B0GVL6 79 aa9.75□□□□□ -0.85
GTF3AP1-201ENST00000416942 SOX1O00570 391 aaPredicted RBP9.75□□□□□ -0.85
GTF3AP1-201ENST00000416942 ESRRAP11474 423 aaPredicted RBP9.75□□□□□ -0.85
GTF3AP1-201ENST00000416942 ITPKAP23677 461 aa9.75□□□□□ -0.85
GTF3AP1-201ENST00000416942 CD68P34810 354 aaPredicted RBP9.75□□□□□ -0.85
GTF3AP1-201ENST00000416942 NRG1Q02297 640 aaPredicted RBP9.75□□□□□ -0.85
GTF3AP1-201ENST00000416942 FOXD4L6Q3SYB3 417 aaPredicted RBP9.75□□□□□ -0.85
GTF3AP1-201ENST00000416942 EAPPQ56P03 285 aaPredicted RBP9.75□□□□□ -0.85
GTF3AP1-201ENST00000416942 TMCO4Q5TGY1 634 aa9.75□□□□□ -0.85
GTF3AP1-201ENST00000416942 HGSNATQ68CP4 663 aa9.75□□□□□ -0.85
GTF3AP1-201ENST00000416942 FOXD4L3Q6VB84 417 aaPredicted RBP9.75□□□□□ -0.85
GTF3AP1-201ENST00000416942 KLHDC7BQ96G42 594 aa9.75□□□□□ -0.85
GTF3AP1-201ENST00000416942 BCO2Q9BYV7 579 aa9.75□□□□□ -0.85
GTF3AP1-201ENST00000416942 CLEC4MQ9H2X3 399 aaPredicted RBP9.75□□□□□ -0.85
GTF3AP1-201ENST00000416942 USP21Q9UK80 565 aa9.75□□□□□ -0.85
GTF3AP1-201ENST00000416942 CAMSAP1Q5T5Y3 1602 aa9.74□□□□□ -0.85
GTF3AP1-201ENST00000416942 ARL4DP49703 201 aa9.74□□□□□ -0.85
GTF3AP1-201ENST00000416942 TRIM26Q12899 539 aaPredicted RBP9.74□□□□□ -0.85
GTF3AP1-201ENST00000416942 ADGRE1Q14246 886 aa9.74□□□□□ -0.85
GTF3AP1-201ENST00000416942 ZNF576Q9H609 170 aa9.74□□□□□ -0.85
GTF3AP1-201ENST00000416942 KCNK4Q9NYG8 393 aa9.74□□□□□ -0.85
GTF3AP1-201ENST00000416942 ERCC3P19447 782 aa9.73□□□□□ -0.85
GTF3AP1-201ENST00000416942 PTPN12Q05209 780 aaKnown RBP9.73□□□□□ -0.85
GTF3AP1-201ENST00000416942 PCDH1Q08174 1060 aa9.73□□□□□ -0.85
GTF3AP1-201ENST00000416942 C19orf57Q0VDD7 668 aa9.73□□□□□ -0.85
GTF3AP1-201ENST00000416942 MBTPS1Q14703 1052 aa9.73□□□□□ -0.85
GTF3AP1-201ENST00000416942 SUZ12Q15022 739 aaKnown RBP9.73□□□□□ -0.85
GTF3AP1-201ENST00000416942 NXPE4Q6UWF7 544 aa9.73□□□□□ -0.85
GTF3AP1-201ENST00000416942 MRPL18Q9H0U6 180 aaKnown RBP9.73□□□□□ -0.85
GTF3AP1-201ENST00000416942 PPP4R2Q9NY27 417 aa9.73□□□□□ -0.85
GTF3AP1-201ENST00000416942 MSTNO14793 375 aa9.72□□□□□ -0.85
GTF3AP1-201ENST00000416942 IGHA1P01876 353 aa9.72□□□□□ -0.85
GTF3AP1-201ENST00000416942 FCGRTP55899 365 aa9.72□□□□□ -0.85
GTF3AP1-201ENST00000416942 SPOCK3Q9BQ16 436 aa9.72□□□□□ -0.85
GTF3AP1-201ENST00000416942 SOX17Q9H6I2 414 aaPredicted RBP9.72□□□□□ -0.85
GTF3AP1-201ENST00000416942 DDX3YO15523 660 aaKnown RBP9.71□□□□□ -0.86
GTF3AP1-201ENST00000416942 ADAM11O75078 769 aa9.71□□□□□ -0.86
GTF3AP1-201ENST00000416942 PRPF40AO75400 957 aaKnown RBP9.71□□□□□ -0.86
GTF3AP1-201ENST00000416942 PROCP04070 461 aa9.71□□□□□ -0.86
GTF3AP1-201ENST00000416942 GATA4P43694 442 aa9.71□□□□□ -0.86
GTF3AP1-201ENST00000416942 RANGAP1P46060 587 aaPredicted RBP9.71□□□□□ -0.86
GTF3AP1-201ENST00000416942 ZNF423Q2M1K9 1284 aa9.71□□□□□ -0.86
GTF3AP1-201ENST00000416942 DTHD1Q6ZMT9 781 aa9.71□□□□□ -0.86
GTF3AP1-201ENST00000416942 AFAP1Q8N556 730 aa9.71□□□□□ -0.86
GTF3AP1-201ENST00000416942 FOXD4L4Q8WXT5 416 aaPredicted RBP9.71□□□□□ -0.86
GTF3AP1-201ENST00000416942 SPG7Q9UQ90 795 aa9.71□□□□□ -0.86
GTF3AP1-201ENST00000416942 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.71□□□□□ -0.86
GTF3AP1-201ENST00000416942 WISP1O95388 367 aa9.7□□□□□ -0.86
GTF3AP1-201ENST00000416942 NLRP12P59046 1061 aa9.7□□□□□ -0.86
GTF3AP1-201ENST00000416942 FGD1P98174 961 aa9.7□□□□□ -0.86
GTF3AP1-201ENST00000416942 TXNRD3Q86VQ6 643 aa9.7□□□□□ -0.86
GTF3AP1-201ENST00000416942 OSBPL7Q9BZF2 842 aa9.7□□□□□ -0.86
GTF3AP1-201ENST00000416942 CFAP74Q9C0B2 1584 aa9.7□□□□□ -0.86
GTF3AP1-201ENST00000416942 C3P01024 1663 aa9.7□□□□□ -0.86
GTF3AP1-201ENST00000416942 CTTNBP2Q8WZ74 1663 aa9.7□□□□□ -0.86
GTF3AP1-201ENST00000416942 GIPC1O14908 333 aa9.69□□□□□ -0.86
GTF3AP1-201ENST00000416942 XRCC5P13010 732 aaKnown RBP9.69□□□□□ -0.86
GTF3AP1-201ENST00000416942 NUP153P49790 1475 aaKnown RBP9.69□□□□□ -0.86
GTF3AP1-201ENST00000416942 DUOXA2Q1HG44 320 aa9.69□□□□□ -0.86
GTF3AP1-201ENST00000416942 RPS26P11Q5JNZ5 115 aaPredicted RBP9.69□□□□□ -0.86
GTF3AP1-201ENST00000416942 FBXO33Q7Z6M2 555 aa9.69□□□□□ -0.86
GTF3AP1-201ENST00000416942 TMEM130Q8N3G9 435 aa9.69□□□□□ -0.86
GTF3AP1-201ENST00000416942 WFDC12Q8WWY7 111 aa9.69□□□□□ -0.86
GTF3AP1-201ENST00000416942 SRCIN1Q9C0H9 1055 aa9.69□□□□□ -0.86
GTF3AP1-201ENST00000416942 RAPGEF6Q8TEU7 1601 aa9.68□□□□□ -0.86
GTF3AP1-201ENST00000416942 F8W735 103 aaPredicted RBP9.68□□□□□ -0.86
GTF3AP1-201ENST00000416942 B3GALT4O96024 378 aa9.68□□□□□ -0.86
GTF3AP1-201ENST00000416942 GSTM4Q03013 218 aa9.68□□□□□ -0.86
GTF3AP1-201ENST00000416942 ACAD11Q709F0 780 aa9.68□□□□□ -0.86
GTF3AP1-201ENST00000416942 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.68□□□□□ -0.86
GTF3AP1-201ENST00000416942 UBASH3BQ8TF42 649 aa9.68□□□□□ -0.86
GTF3AP1-201ENST00000416942 DUSP9Q99956 384 aaKnown RBP9.68□□□□□ -0.86
GTF3AP1-201ENST00000416942 AKTIPQ9H8T0 292 aa9.68□□□□□ -0.86
GTF3AP1-201ENST00000416942 ALX3O95076 343 aa9.67□□□□□ -0.86
GTF3AP1-201ENST00000416942 NOS3P29474 1203 aa9.67□□□□□ -0.86
GTF3AP1-201ENST00000416942 GNA15P30679 374 aa9.67□□□□□ -0.86
GTF3AP1-201ENST00000416942 IREB2P48200 963 aaKnown RBP9.67□□□□□ -0.86
GTF3AP1-201ENST00000416942 EFCAB2Q5VUJ9 269 aa9.67□□□□□ -0.86
GTF3AP1-201ENST00000416942 AGGF1Q8N302 714 aaeCLIP9.67□□□□□ -0.86
GTF3AP1-201ENST00000416942 FRMD6Q96NE9 622 aa9.67□□□□□ -0.86
GTF3AP1-201ENST00000416942 C12orf49Q9H741 205 aa9.67□□□□□ -0.86
GTF3AP1-201ENST00000416942 ZFYVE1Q9HBF4 777 aa9.67□□□□□ -0.86
GTF3AP1-201ENST00000416942 RNF19AQ9NV58 838 aa9.67□□□□□ -0.86
GTF3AP1-201ENST00000416942 EIF4EBP3O60516 100 aaPredicted RBP9.66□□□□□ -0.86
GTF3AP1-201ENST00000416942 GSTT1P30711 240 aa9.66□□□□□ -0.86
GTF3AP1-201ENST00000416942 MFAP1P55081 439 aaKnown RBP9.66□□□□□ -0.86
GTF3AP1-201ENST00000416942 FAAP100Q0VG06 881 aa9.66□□□□□ -0.86
GTF3AP1-201ENST00000416942 KIAA1211Q6ZU35 1233 aa9.66□□□□□ -0.86
GTF3AP1-201ENST00000416942 C3orf58Q8NDZ4 430 aa9.66□□□□□ -0.86
GTF3AP1-201ENST00000416942 AKAP2Q9Y2D5 859 aa9.66□□□□□ -0.86
GTF3AP1-201ENST00000416942 PLCH2O75038 1416 aa9.65□□□□□ -0.86
GTF3AP1-201ENST00000416942 DDX54Q8TDD1 881 aaKnown RBP9.65□□□□□ -0.86
GTF3AP1-201ENST00000416942 USP26Q9BXU7 913 aa9.65□□□□□ -0.86
GTF3AP1-201ENST00000416942 ZNF157P51786 506 aaPredicted RBP9.64□□□□□ -0.87
GTF3AP1-201ENST00000416942 TAGLNQ01995 201 aaKnown RBP9.64□□□□□ -0.87
GTF3AP1-201ENST00000416942 NRSN2Q9GZP1 204 aa9.64□□□□□ -0.87
GTF3AP1-201ENST00000416942 FAM8A1Q9UBU6 413 aa9.64□□□□□ -0.87
GTF3AP1-201ENST00000416942 PARP2Q9UGN5 583 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms