RNA–Protein interactions for RNA: ENST00000416078.1

NCLP2-201, Transcript of nucleolin pseudogene 2, humanhuman

BASIC

Gene NCLP2, Length 1,462 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP2-201ENST00000416078 LRRC9Q6ZRR7 1453 aa7.56□□□□□ -1.2
NCLP2-201ENST00000416078 CCNB3Q8WWL7 1395 aa7.56□□□□□ -1.2
NCLP2-201ENST00000416078 CDC42BPAQ5VT25 1732 aa7.56□□□□□ -1.2
NCLP2-201ENST00000416078 SUPT6HQ7KZ85 1726 aaKnown RBP7.56□□□□□ -1.2
NCLP2-201ENST00000416078 AKNAQ7Z591 1439 aa7.56□□□□□ -1.2
NCLP2-201ENST00000416078 TMC7Q7Z402 723 aa7.55□□□□□ -1.2
NCLP2-201ENST00000416078 DZIP1LQ8IYY4 767 aaKnown RBP7.55□□□□□ -1.2
NCLP2-201ENST00000416078 MEGF10Q96KG7 1140 aa7.55□□□□□ -1.2
NCLP2-201ENST00000416078 TCF12Q99081 682 aa7.55□□□□□ -1.2
NCLP2-201ENST00000416078 SOX17Q9H6I2 414 aaPredicted RBP7.55□□□□□ -1.2
NCLP2-201ENST00000416078 KCNK4Q9NYG8 393 aa7.55□□□□□ -1.2
NCLP2-201ENST00000416078 PREX2Q70Z35 1606 aa7.55□□□□□ -1.2
NCLP2-201ENST00000416078 DYRK3O43781 588 aa7.55□□□□□ -1.2
NCLP2-201ENST00000416078 ADAM11O75078 769 aa7.55□□□□□ -1.2
NCLP2-201ENST00000416078 WISP1O95388 367 aa7.55□□□□□ -1.2
NCLP2-201ENST00000416078 IREB2P48200 963 aaKnown RBP7.55□□□□□ -1.2
NCLP2-201ENST00000416078 FOXD4L4Q8WXT5 416 aaPredicted RBP7.55□□□□□ -1.2
NCLP2-201ENST00000416078 CARD10Q9BWT7 1032 aa7.55□□□□□ -1.2
NCLP2-201ENST00000416078 NIF3L1Q9GZT8 377 aa7.55□□□□□ -1.2
NCLP2-201ENST00000416078 BIN2Q9UBW5 565 aaPredicted RBP7.55□□□□□ -1.2
NCLP2-201ENST00000416078 ARHGAP5Q13017 1502 aa7.55□□□□□ -1.2
NCLP2-201ENST00000416078 GPATCH8Q9UKJ3 1502 aaKnown RBP7.55□□□□□ -1.2
NCLP2-201ENST00000416078 EIF1AYO14602 144 aaKnown RBP7.54□□□□□ -1.2
NCLP2-201ENST00000416078 DSC3Q14574 896 aa7.54□□□□□ -1.2
NCLP2-201ENST00000416078 KLHDC7BQ96G42 594 aa7.54□□□□□ -1.2
NCLP2-201ENST00000416078 CSRNP1Q96S65 589 aa7.54□□□□□ -1.2
NCLP2-201ENST00000416078 NPHS2Q9NP85 383 aa7.54□□□□□ -1.2
NCLP2-201ENST00000416078 NCOA2Q15596 1464 aa7.53□□□□□ -1.2
NCLP2-201ENST00000416078 TREHO43280 583 aa7.53□□□□□ -1.2
NCLP2-201ENST00000416078 HYAL3O43820 417 aaPredicted RBP7.53□□□□□ -1.2
NCLP2-201ENST00000416078 PRPF40BQ6NWY9 871 aaKnown RBP7.53□□□□□ -1.2
NCLP2-201ENST00000416078 CFDP1Q9UEE9 299 aaPredicted RBP7.53□□□□□ -1.2
NCLP2-201ENST00000416078 ITSN2Q9NZM3 1697 aa7.53□□□□□ -1.2
NCLP2-201ENST00000416078 DENND4BO75064 1496 aaPredicted RBP7.52□□□□□ -1.2
NCLP2-201ENST00000416078 ADGRL1O94910 1474 aa7.52□□□□□ -1.2
NCLP2-201ENST00000416078 METTL12A8MUP2 240 aa7.52□□□□□ -1.21
NCLP2-201ENST00000416078 ESRRAP11474 423 aaPredicted RBP7.52□□□□□ -1.21
NCLP2-201ENST00000416078 CDC25BP30305 580 aa7.52□□□□□ -1.21
NCLP2-201ENST00000416078 C19orf57Q0VDD7 668 aa7.52□□□□□ -1.21
NCLP2-201ENST00000416078 KRTAP5-3Q6L8H2 238 aa7.52□□□□□ -1.21
NCLP2-201ENST00000416078 KIAA1211Q6ZU35 1233 aa7.52□□□□□ -1.21
NCLP2-201ENST00000416078 CCDC74AQ96AQ1 378 aa7.52□□□□□ -1.21
NCLP2-201ENST00000416078 LIN7BQ9HAP6 207 aa7.52□□□□□ -1.21
NCLP2-201ENST00000416078 SCAPERQ9BY12 1400 aa7.52□□□□□ -1.21
NCLP2-201ENST00000416078 A0A096LPE4 126 aa7.51□□□□□ -1.21
NCLP2-201ENST00000416078 A0A1W2PPZ6 126 aa7.51□□□□□ -1.21
NCLP2-201ENST00000416078 SOX1O00570 391 aaPredicted RBP7.51□□□□□ -1.21
NCLP2-201ENST00000416078 EIF4EBP3O60516 100 aaPredicted RBP7.51□□□□□ -1.21
NCLP2-201ENST00000416078 RAPGEF3O95398 923 aa7.51□□□□□ -1.21
NCLP2-201ENST00000416078 ITPKAP23677 461 aa7.51□□□□□ -1.21
NCLP2-201ENST00000416078 GRIA4P48058 902 aa7.51□□□□□ -1.21
NCLP2-201ENST00000416078 PTPN12Q05209 780 aaKnown RBP7.51□□□□□ -1.21
NCLP2-201ENST00000416078 IKBKEQ14164 716 aa7.51□□□□□ -1.21
NCLP2-201ENST00000416078 ACAD11Q709F0 780 aa7.51□□□□□ -1.21
NCLP2-201ENST00000416078 TMC1Q8TDI8 760 aa7.51□□□□□ -1.21
NCLP2-201ENST00000416078 TP53INP1Q96A56 240 aa7.51□□□□□ -1.21
NCLP2-201ENST00000416078 RICTORQ6R327 1708 aa7.51□□□□□ -1.21
NCLP2-201ENST00000416078 ALX3O95076 343 aa7.5□□□□□ -1.21
NCLP2-201ENST00000416078 MAPK1P28482 360 aa7.5□□□□□ -1.21
NCLP2-201ENST00000416078 ARL4DP49703 201 aa7.5□□□□□ -1.21
NCLP2-201ENST00000416078 HGSNATQ68CP4 663 aa7.5□□□□□ -1.21
NCLP2-201ENST00000416078 AGGF1Q8N302 714 aaeCLIP7.5□□□□□ -1.21
NCLP2-201ENST00000416078 ASAP3Q8TDY4 903 aa7.5□□□□□ -1.21
NCLP2-201ENST00000416078 UBASH3BQ8TF42 649 aa7.5□□□□□ -1.21
NCLP2-201ENST00000416078 CLEC4MQ9H2X3 399 aaPredicted RBP7.5□□□□□ -1.21
NCLP2-201ENST00000416078 ABCB6Q9NP58 842 aa7.5□□□□□ -1.21
NCLP2-201ENST00000416078 PLEKHH2Q8IVE3 1493 aa7.5□□□□□ -1.21
NCLP2-201ENST00000416078 DDX3YO15523 660 aaKnown RBP7.49□□□□□ -1.21
NCLP2-201ENST00000416078 DUOXA2Q1HG44 320 aa7.49□□□□□ -1.21
NCLP2-201ENST00000416078 UVSSAQ2YD98 709 aa7.49□□□□□ -1.21
NCLP2-201ENST00000416078 SAMD9LQ8IVG5 1584 aa7.49□□□□□ -1.21
NCLP2-201ENST00000416078 ASB16Q96NS5 453 aa7.49□□□□□ -1.21
NCLP2-201ENST00000416078 NRSN2Q9GZP1 204 aa7.49□□□□□ -1.21
NCLP2-201ENST00000416078 KIAA1107Q9UPP5 1409 aa7.49□□□□□ -1.21
NCLP2-201ENST00000416078 FRMPD1Q5SYB0 1578 aa7.49□□□□□ -1.21
NCLP2-201ENST00000416078 ABCC1P33527 1531 aa7.49□□□□□ -1.21
NCLP2-201ENST00000416078 MYOM3Q5VTT5 1437 aa7.49□□□□□ -1.21
NCLP2-201ENST00000416078 POGZQ7Z3K3 1410 aa7.49□□□□□ -1.21
NCLP2-201ENST00000416078 MIA2Q96PC5 1412 aa7.49□□□□□ -1.21
NCLP2-201ENST00000416078 FMR1Q06787 632 aaKnown RBP eCLIP7.49□□□□□ -1.21
NCLP2-201ENST00000416078 ENOX2Q16206 610 aaKnown RBP7.49□□□□□ -1.21
NCLP2-201ENST00000416078 GLIS3Q8NEA6 775 aa7.49□□□□□ -1.21
NCLP2-201ENST00000416078 SLC7A3Q8WY07 619 aa7.49□□□□□ -1.21
NCLP2-201ENST00000416078 CEP41Q9BYV8 373 aa7.49□□□□□ -1.21
NCLP2-201ENST00000416078 EHD4Q9H223 541 aa7.49□□□□□ -1.21
NCLP2-201ENST00000416078 ZNF576Q9H609 170 aa7.49□□□□□ -1.21
NCLP2-201ENST00000416078 ZMYM4Q5VZL5 1548 aa7.48□□□□□ -1.21
NCLP2-201ENST00000416078 ARHGEF12Q9NZN5 1544 aa7.48□□□□□ -1.21
NCLP2-201ENST00000416078 ZNF518AQ6AHZ1 1483 aa7.48□□□□□ -1.21
NCLP2-201ENST00000416078 ZNF644Q9H582 1327 aaPredicted RBP7.48□□□□□ -1.21
NCLP2-201ENST00000416078 MEGF11A6BM72 1044 aa7.48□□□□□ -1.21
NCLP2-201ENST00000416078 HNRNPMP52272 730 aaKnown RBP eCLIP7.48□□□□□ -1.21
NCLP2-201ENST00000416078 PCDH1Q08174 1060 aa7.48□□□□□ -1.21
NCLP2-201ENST00000416078 SPRED3Q2MJR0 410 aa7.48□□□□□ -1.21
NCLP2-201ENST00000416078 PRSS36Q5K4E3 855 aa7.48□□□□□ -1.21
NCLP2-201ENST00000416078 AFAP1Q8N556 730 aa7.48□□□□□ -1.21
NCLP2-201ENST00000416078 FAM46AQ96IP4 442 aaKnown RBP7.48□□□□□ -1.21
NCLP2-201ENST00000416078 RNF208Q9H0X6 261 aa7.48□□□□□ -1.21
NCLP2-201ENST00000416078 TRAK1Q9UPV9 953 aa7.48□□□□□ -1.21
NCLP2-201ENST00000416078 MAGI2Q86UL8 1455 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms