RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 C1GALT1Q9NS00 363 aa6.53□□□□□ -1.36
TRAPPC13-203ENST00000415825 MBNL3Q9NUK0 354 aaKnown RBP6.53□□□□□ -1.36
TRAPPC13-203ENST00000415825 SEPT3Q9UH03 358 aa6.53□□□□□ -1.36
TRAPPC13-203ENST00000415825 MTMR7Q9Y216 660 aa6.53□□□□□ -1.36
TRAPPC13-203ENST00000415825 AP3B2Q13367 1082 aa6.52□□□□□ -1.37
TRAPPC13-203ENST00000415825 LCE4AQ5TA78 99 aa6.52□□□□□ -1.37
TRAPPC13-203ENST00000415825 LILRA6Q6PI73 481 aa6.52□□□□□ -1.37
TRAPPC13-203ENST00000415825 SLC23A3Q6PIS1 610 aa6.52□□□□□ -1.37
TRAPPC13-203ENST00000415825 FAM181AQ8N9Y4 354 aa6.52□□□□□ -1.37
TRAPPC13-203ENST00000415825 LIN7BQ9HAP6 207 aa6.52□□□□□ -1.37
TRAPPC13-203ENST00000415825 MKNK2Q9HBH9 465 aa6.52□□□□□ -1.37
TRAPPC13-203ENST00000415825 POLIQ9UNA4 740 aa6.52□□□□□ -1.37
TRAPPC13-203ENST00000415825 METTL12A8MUP2 240 aa6.51□□□□□ -1.37
TRAPPC13-203ENST00000415825 AOC2O75106 756 aa6.51□□□□□ -1.37
TRAPPC13-203ENST00000415825 MPZL3Q6UWV2 235 aa6.51□□□□□ -1.37
TRAPPC13-203ENST00000415825 SSU72Q9NP77 194 aaKnown RBP6.51□□□□□ -1.37
TRAPPC13-203ENST00000415825 RNGTTO60942 597 aaKnown RBP6.5□□□□□ -1.37
TRAPPC13-203ENST00000415825 NEFLP07196 543 aa6.5□□□□□ -1.37
TRAPPC13-203ENST00000415825 ZNF865P0CJ78 1059 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC13-203ENST00000415825 MPSTP25325 297 aa6.5□□□□□ -1.37
TRAPPC13-203ENST00000415825 CDK5R2Q13319 367 aa6.5□□□□□ -1.37
TRAPPC13-203ENST00000415825 SEZ6L2Q6UXD5 910 aa6.5□□□□□ -1.37
TRAPPC13-203ENST00000415825 LRRC56Q8IYG6 542 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC13-203ENST00000415825 NRSN2Q9GZP1 204 aa6.5□□□□□ -1.37
TRAPPC13-203ENST00000415825 LATS2Q9NRM7 1088 aa6.5□□□□□ -1.37
TRAPPC13-203ENST00000415825 FOXD3Q9UJU5 478 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC13-203ENST00000415825 SYNGAP1Q96PV0 1343 aa6.5□□□□□ -1.37
TRAPPC13-203ENST00000415825 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC13-203ENST00000415825 NFIBO00712 420 aa6.49□□□□□ -1.37
TRAPPC13-203ENST00000415825 DYNC1LI2O43237 492 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC13-203ENST00000415825 FAM13AO94988 1023 aa6.49□□□□□ -1.37
TRAPPC13-203ENST00000415825 TSPAN15O95858 294 aa6.49□□□□□ -1.37
TRAPPC13-203ENST00000415825 CEACAM5P06731 702 aa6.49□□□□□ -1.37
TRAPPC13-203ENST00000415825 AFMP43652 599 aa6.49□□□□□ -1.37
TRAPPC13-203ENST00000415825 SIAH1Q8IUQ4 282 aa6.49□□□□□ -1.37
TRAPPC13-203ENST00000415825 SMYD4Q8IYR2 804 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC13-203ENST00000415825 FLAD1Q8NFF5 587 aa6.49□□□□□ -1.37
TRAPPC13-203ENST00000415825 CCER1Q8TC90 406 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC13-203ENST00000415825 ASB11Q8WXH4 323 aa6.49□□□□□ -1.37
TRAPPC13-203ENST00000415825 KRTAP4-11Q9BYQ6 195 aa6.49□□□□□ -1.37
TRAPPC13-203ENST00000415825 GSX1Q9H4S2 264 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC13-203ENST00000415825 ADAMTS6Q9UKP5 1117 aa6.49□□□□□ -1.37
TRAPPC13-203ENST00000415825 B8ZZF3 427 aa6.48□□□□□ -1.37
TRAPPC13-203ENST00000415825 ZNF423Q2M1K9 1284 aa6.48□□□□□ -1.37
TRAPPC13-203ENST00000415825 PEAR1Q5VY43 1037 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC13-203ENST00000415825 CCNJLQ8IV13 435 aa6.48□□□□□ -1.37
TRAPPC13-203ENST00000415825 ZFYVE28Q9HCC9 887 aa6.48□□□□□ -1.37
TRAPPC13-203ENST00000415825 PRRG2O14669 202 aa6.47□□□□□ -1.37
TRAPPC13-203ENST00000415825 B3GALT4O96024 378 aa6.47□□□□□ -1.37
TRAPPC13-203ENST00000415825 ZSCAN22P10073 491 aaPredicted RBP6.47□□□□□ -1.37
TRAPPC13-203ENST00000415825 ITIH2P19823 946 aa6.47□□□□□ -1.37
TRAPPC13-203ENST00000415825 ID3Q02535 119 aa6.47□□□□□ -1.37
TRAPPC13-203ENST00000415825 MESP2Q0VG99 397 aa6.47□□□□□ -1.37
TRAPPC13-203ENST00000415825 IKZF1Q13422 519 aa6.47□□□□□ -1.37
TRAPPC13-203ENST00000415825 GTF3C2Q8WUA4 911 aaPredicted RBP6.47□□□□□ -1.37
TRAPPC13-203ENST00000415825 WDR18Q9BV38 432 aa6.47□□□□□ -1.37
TRAPPC13-203ENST00000415825 SNX11Q9Y5W9 270 aa6.47□□□□□ -1.37
TRAPPC13-203ENST00000415825 CTSBP07858 339 aa6.46□□□□□ -1.38
TRAPPC13-203ENST00000415825 CD96P40200 585 aa6.46□□□□□ -1.38
TRAPPC13-203ENST00000415825 SYDE1Q6ZW31 735 aaPredicted RBP6.46□□□□□ -1.38
TRAPPC13-203ENST00000415825 GTF2IRD1Q9UHL9 959 aa6.46□□□□□ -1.38
TRAPPC13-203ENST00000415825 PCOLCE2Q9UKZ9 415 aa6.46□□□□□ -1.38
TRAPPC13-203ENST00000415825 NCANO14594 1321 aa6.46□□□□□ -1.38
TRAPPC13-203ENST00000415825 POLR3DP05423 398 aaPredicted RBP6.45□□□□□ -1.38
TRAPPC13-203ENST00000415825 CFPP27918 469 aa6.45□□□□□ -1.38
TRAPPC13-203ENST00000415825 ZP2Q05996 745 aa6.45□□□□□ -1.38
TRAPPC13-203ENST00000415825 SPRED3Q2MJR0 410 aa6.45□□□□□ -1.38
TRAPPC13-203ENST00000415825 WFDC3Q8IUB2 231 aa6.45□□□□□ -1.38
TRAPPC13-203ENST00000415825 EHD4Q9H223 541 aa6.45□□□□□ -1.38
TRAPPC13-203ENST00000415825 A0A1W2PP55 124 aa6.44□□□□□ -1.38
TRAPPC13-203ENST00000415825 GRIA4P48058 902 aa6.44□□□□□ -1.38
TRAPPC13-203ENST00000415825 TMEM67Q5HYA8 995 aa6.44□□□□□ -1.38
TRAPPC13-203ENST00000415825 PBXIP1Q96AQ6 731 aa6.44□□□□□ -1.38
TRAPPC13-203ENST00000415825 PPP1R9AQ9ULJ8 1098 aa6.44□□□□□ -1.38
TRAPPC13-203ENST00000415825 TMPRSS2O15393 492 aa6.43□□□□□ -1.38
TRAPPC13-203ENST00000415825 TMEM253P0C7T8 217 aa6.43□□□□□ -1.38
TRAPPC13-203ENST00000415825 LIG1P18858 919 aa6.43□□□□□ -1.38
TRAPPC13-203ENST00000415825 SRPK2P78362 688 aaKnown RBP6.43□□□□□ -1.38
TRAPPC13-203ENST00000415825 GALNT12Q8IXK2 581 aa6.43□□□□□ -1.38
TRAPPC13-203ENST00000415825 FANCD2OSQ96PS1 177 aa6.43□□□□□ -1.38
TRAPPC13-203ENST00000415825 TRIM56Q9BRZ2 755 aaKnown RBP6.43□□□□□ -1.38
TRAPPC13-203ENST00000415825 CRIM1Q9NZV1 1036 aa6.43□□□□□ -1.38
TRAPPC13-203ENST00000415825 RAPGEFL1Q9UHV5 662 aa6.43□□□□□ -1.38
TRAPPC13-203ENST00000415825 GNAT3A8MTJ3 354 aa6.42□□□□□ -1.38
TRAPPC13-203ENST00000415825 ECEL1O95672 775 aa6.42□□□□□ -1.38
TRAPPC13-203ENST00000415825 GLI1P08151 1106 aa6.42□□□□□ -1.38
TRAPPC13-203ENST00000415825 OXCT1P55809 520 aa6.42□□□□□ -1.38
TRAPPC13-203ENST00000415825 SF3B2Q13435 895 aaKnown RBP6.42□□□□□ -1.38
TRAPPC13-203ENST00000415825 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.42□□□□□ -1.38
TRAPPC13-203ENST00000415825 LIN37Q96GY3 246 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC13-203ENST00000415825 CCDC120Q96HB5 630 aa6.42□□□□□ -1.38
TRAPPC13-203ENST00000415825 KIRREL1Q96J84 757 aa6.42□□□□□ -1.38
TRAPPC13-203ENST00000415825 DUSP23Q9BVJ7 150 aa6.42□□□□□ -1.38
TRAPPC13-203ENST00000415825 ZNF576Q9H609 170 aa6.42□□□□□ -1.38
TRAPPC13-203ENST00000415825 LMCD1Q9NZU5 365 aa6.42□□□□□ -1.38
TRAPPC13-203ENST00000415825 ZNF503-AS2A6NEH8 195 aa6.41□□□□□ -1.38
TRAPPC13-203ENST00000415825 HCLS1P14317 486 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC13-203ENST00000415825 PPP2R3AQ06190 1150 aa6.41□□□□□ -1.38
TRAPPC13-203ENST00000415825 TTLL4Q14679 1199 aa6.41□□□□□ -1.38
TRAPPC13-203ENST00000415825 CYFIP1Q7L576 1253 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms