RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 SAMD7Q7Z3H4 446 aa17.41■□□□□ 0.38
SGCE-202ENST00000415788 ZBED3Q96IU2 234 aaPredicted RBP17.41■□□□□ 0.38
SGCE-202ENST00000415788 TAF1DQ9H5J8 278 aaPredicted RBP17.41■□□□□ 0.38
SGCE-202ENST00000415788 SCN4AP35499 1836 aa17.41■□□□□ 0.38
SGCE-202ENST00000415788 POTECB2RU33 542 aa17.41■□□□□ 0.38
SGCE-202ENST00000415788 PLCG2P16885 1265 aa17.41■□□□□ 0.38
SGCE-202ENST00000415788 BTDP43251 543 aa17.41■□□□□ 0.38
SGCE-202ENST00000415788 PPP4CP60510 307 aa17.41■□□□□ 0.38
SGCE-202ENST00000415788 TBC1D10BQ4KMP7 808 aaPredicted RBP17.41■□□□□ 0.38
SGCE-202ENST00000415788 APOBEC3HQ6NTF7 200 aaKnown RBP17.41■□□□□ 0.38
SGCE-202ENST00000415788 DIAPH3Q9NSV4 1193 aa17.41■□□□□ 0.38
SGCE-202ENST00000415788 WNT10BO00744 389 aa17.4■□□□□ 0.38
SGCE-202ENST00000415788 YY1P25490 414 aa17.4■□□□□ 0.38
SGCE-202ENST00000415788 ZMYM1Q5SVZ6 1142 aa17.4■□□□□ 0.38
SGCE-202ENST00000415788 RBM26Q5T8P6 1007 aaKnown RBP17.4■□□□□ 0.38
SGCE-202ENST00000415788 RRAGCQ9HB90 399 aa17.4■□□□□ 0.38
SGCE-202ENST00000415788 HELLSQ9NRZ9 838 aa17.4■□□□□ 0.38
SGCE-202ENST00000415788 ADGRA1Q86SQ6 560 aa17.39■□□□□ 0.38
SGCE-202ENST00000415788 TRPM4Q8TD43 1214 aa17.39■□□□□ 0.38
SGCE-202ENST00000415788 ZNF526Q8TF50 670 aaPredicted RBP17.39■□□□□ 0.38
SGCE-202ENST00000415788 PRMT6Q96LA8 375 aaPredicted RBP17.39■□□□□ 0.38
SGCE-202ENST00000415788 GPBP1L1Q9HC44 474 aaPredicted RBP17.39■□□□□ 0.38
SGCE-202ENST00000415788 MAGEB6P1A0A0J9YX57 407 aa17.39■□□□□ 0.37
SGCE-202ENST00000415788 EGFRP00533 1210 aa17.39■□□□□ 0.37
SGCE-202ENST00000415788 CASC1Q6TDU7 716 aa17.39■□□□□ 0.37
SGCE-202ENST00000415788 ZC3H15Q8WU90 426 aaKnown RBP17.39■□□□□ 0.37
SGCE-202ENST00000415788 CDC45O75419 566 aa17.38■□□□□ 0.37
SGCE-202ENST00000415788 MIGA1Q8NAN2 632 aa17.38■□□□□ 0.37
SGCE-202ENST00000415788 RUFY2Q8WXA3 655 aa17.38■□□□□ 0.37
SGCE-202ENST00000415788 OSBP2Q969R2 916 aa17.38■□□□□ 0.37
SGCE-202ENST00000415788 AIDAQ96BJ3 306 aa17.38■□□□□ 0.37
SGCE-202ENST00000415788 TBC1D32Q96NH3 1257 aa17.38■□□□□ 0.37
SGCE-202ENST00000415788 NMRK2Q9NPI5 230 aa17.38■□□□□ 0.37
SGCE-202ENST00000415788 AATFQ9NY61 560 aaKnown RBP eCLIP17.38■□□□□ 0.37
SGCE-202ENST00000415788 TMOD2Q9NZR1 351 aa17.38■□□□□ 0.37
SGCE-202ENST00000415788 EIF5BO60841 1220 aaKnown RBP17.37■□□□□ 0.37
SGCE-202ENST00000415788 CHMLP26374 656 aa17.37■□□□□ 0.37
SGCE-202ENST00000415788 NBPF9Q3BBW0 867 aa17.37■□□□□ 0.37
SGCE-202ENST00000415788 RIOK1Q9BRS2 568 aaKnown RBP17.37■□□□□ 0.37
SGCE-202ENST00000415788 PUS7LQ9H0K6 701 aaKnown RBP17.37■□□□□ 0.37
SGCE-202ENST00000415788 CHGBP05060 677 aa17.37■□□□□ 0.37
SGCE-202ENST00000415788 HIRAP54198 1017 aaPredicted RBP17.37■□□□□ 0.37
SGCE-202ENST00000415788 NMIQ13287 307 aaPredicted RBP17.37■□□□□ 0.37
SGCE-202ENST00000415788 SPDYE2Q495Y8 402 aa17.37■□□□□ 0.37
SGCE-202ENST00000415788 SLFNL1Q499Z3 407 aa17.37■□□□□ 0.37
SGCE-202ENST00000415788 MCMDC2Q4G0Z9 681 aa17.37■□□□□ 0.37
SGCE-202ENST00000415788 CDC42EP5Q6NZY7 148 aa17.37■□□□□ 0.37
SGCE-202ENST00000415788 USP40Q9NVE5 1235 aa17.37■□□□□ 0.37
SGCE-202ENST00000415788 PCDHAC2Q9Y5I4 1007 aa17.37■□□□□ 0.37
SGCE-202ENST00000415788 RAD50Q92878 1312 aa17.37■□□□□ 0.37
SGCE-202ENST00000415788 MYO5AQ9Y4I1 1855 aaKnown RBP17.36■□□□□ 0.37
SGCE-202ENST00000415788 MBD4O95243 580 aa17.36■□□□□ 0.37
SGCE-202ENST00000415788 SEC24BO95487 1268 aa17.36■□□□□ 0.37
SGCE-202ENST00000415788 MFAP1P55081 439 aaKnown RBP17.36■□□□□ 0.37
SGCE-202ENST00000415788 RHBDL3P58872 404 aa17.36■□□□□ 0.37
SGCE-202ENST00000415788 FKBP1CQ5VVH2 108 aa17.36■□□□□ 0.37
SGCE-202ENST00000415788 CWC27Q6UX04 472 aaKnown RBP17.36■□□□□ 0.37
SGCE-202ENST00000415788 FAM227BQ96M60 508 aa17.36■□□□□ 0.37
SGCE-202ENST00000415788 TDRD3Q9H7E2 651 aaKnown RBP17.36■□□□□ 0.37
SGCE-202ENST00000415788 PITPNM2Q9BZ72 1349 aa17.36■□□□□ 0.37
SGCE-202ENST00000415788 MYH7P12883 1935 aa17.36■□□□□ 0.37
SGCE-202ENST00000415788 MYH2Q9UKX2 1941 aa17.36■□□□□ 0.37
SGCE-202ENST00000415788 A0A0D9SFI3 127 aa17.35■□□□□ 0.37
SGCE-202ENST00000415788 GNAT2P19087 354 aa17.35■□□□□ 0.37
SGCE-202ENST00000415788 EAPPQ56P03 285 aaPredicted RBP17.35■□□□□ 0.37
SGCE-202ENST00000415788 CRNKL1Q9BZJ0 848 aaKnown RBP17.35■□□□□ 0.37
SGCE-202ENST00000415788 ZNF70Q9UC06 446 aaPredicted RBP17.35■□□□□ 0.37
SGCE-202ENST00000415788 GPAA1O43292 621 aa17.35■□□□□ 0.37
SGCE-202ENST00000415788 TNFAIP1Q13829 316 aa17.35■□□□□ 0.37
SGCE-202ENST00000415788 APOBEC3FQ8IUX4 373 aaKnown RBP17.35■□□□□ 0.37
SGCE-202ENST00000415788 IDI2Q9BXS1 227 aa17.35■□□□□ 0.37
SGCE-202ENST00000415788 PGAP2Q9UHJ9 254 aa17.35■□□□□ 0.37
SGCE-202ENST00000415788 AK9Q5TCS8 1911 aa17.34■□□□□ 0.37
SGCE-202ENST00000415788 M0R2C6 588 aa17.34■□□□□ 0.37
SGCE-202ENST00000415788 NPM3O75607 178 aaKnown RBP17.34■□□□□ 0.37
SGCE-202ENST00000415788 DYNLL1P63167 89 aaKnown RBP17.34■□□□□ 0.37
SGCE-202ENST00000415788 LDHDQ86WU2 507 aa17.34■□□□□ 0.37
SGCE-202ENST00000415788 TEX11Q8IYF3 940 aa17.34■□□□□ 0.37
SGCE-202ENST00000415788 LCORLQ8N3X6 602 aa17.34■□□□□ 0.37
SGCE-202ENST00000415788 SH3RF3Q8TEJ3 882 aaPredicted RBP17.34■□□□□ 0.37
SGCE-202ENST00000415788 STRBPQ96SI9 672 aaKnown RBP17.34■□□□□ 0.37
SGCE-202ENST00000415788 SEC62Q99442 399 aaKnown RBP17.34■□□□□ 0.37
SGCE-202ENST00000415788 ARMT1Q9H993 441 aa17.34■□□□□ 0.37
SGCE-202ENST00000415788 GGA3Q9NZ52 723 aa17.34■□□□□ 0.37
SGCE-202ENST00000415788 CLRN2A0PK11 232 aa17.33■□□□□ 0.37
SGCE-202ENST00000415788 ANGEL2Q5VTE6 544 aaKnown RBP17.33■□□□□ 0.37
SGCE-202ENST00000415788 DCPSQ96C86 337 aaKnown RBP17.33■□□□□ 0.37
SGCE-202ENST00000415788 SLKQ9H2G2 1235 aaPredicted RBP17.33■□□□□ 0.37
SGCE-202ENST00000415788 ADAMTSL1Q8N6G6 1762 aa17.33■□□□□ 0.36
SGCE-202ENST00000415788 RPAP1Q9BWH6 1393 aaPredicted RBP17.33■□□□□ 0.36
SGCE-202ENST00000415788 CCDC171Q6TFL3 1326 aa17.33■□□□□ 0.36
SGCE-202ENST00000415788 WDHD1O75717 1129 aaPredicted RBP17.33■□□□□ 0.36
SGCE-202ENST00000415788 TNNI2P48788 182 aa17.33■□□□□ 0.36
SGCE-202ENST00000415788 VEZTQ9HBM0 779 aa17.33■□□□□ 0.36
SGCE-202ENST00000415788 FAM83AQ86UY5 434 aa17.32■□□□□ 0.36
SGCE-202ENST00000415788 ZNF784Q8NCA9 323 aaPredicted RBP17.32■□□□□ 0.36
SGCE-202ENST00000415788 SGSM2O43147 1006 aa17.31■□□□□ 0.36
SGCE-202ENST00000415788 ENTPD3O75355 529 aa17.31■□□□□ 0.36
SGCE-202ENST00000415788 TBC1D2Q9BYX2 928 aa17.31■□□□□ 0.36
SGCE-202ENST00000415788 ATP8A2Q9NTI2 1148 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms