RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 MPNDQ8N594 471 aa13.62□□□□□ -0.23
RFFL-205ENST00000415395 CD209Q9NNX6 404 aa13.62□□□□□ -0.23
RFFL-205ENST00000415395 SH2B1Q9NRF2 756 aaPredicted RBP13.62□□□□□ -0.23
RFFL-205ENST00000415395 POLLQ9UGP5 575 aa13.62□□□□□ -0.23
RFFL-205ENST00000415395 SLX4Q8IY92 1834 aa13.62□□□□□ -0.23
RFFL-205ENST00000415395 MBD4O95243 580 aa13.61□□□□□ -0.23
RFFL-205ENST00000415395 CC2D2BQ6DHV5 1058 aa13.61□□□□□ -0.23
RFFL-205ENST00000415395 ZNF622Q969S3 477 aaKnown RBP eCLIP13.61□□□□□ -0.23
RFFL-205ENST00000415395 NSUN4Q96CB9 384 aaKnown RBP13.61□□□□□ -0.23
RFFL-205ENST00000415395 COA1Q9GZY4 146 aa13.61□□□□□ -0.23
RFFL-205ENST00000415395 TIAM2Q8IVF5 1701 aa13.61□□□□□ -0.23
RFFL-205ENST00000415395 C6orf229H3BNL8 230 aa13.61□□□□□ -0.23
RFFL-205ENST00000415395 GRIPAP1Q4V328 841 aa13.61□□□□□ -0.23
RFFL-205ENST00000415395 TBC1D22AQ8WUA7 517 aa13.61□□□□□ -0.23
RFFL-205ENST00000415395 EYA3Q99504 573 aa13.61□□□□□ -0.23
RFFL-205ENST00000415395 NACAP1Q9BZK3 213 aa13.61□□□□□ -0.23
RFFL-205ENST00000415395 MAGEB6P1A0A0J9YX57 407 aa13.6□□□□□ -0.23
RFFL-205ENST00000415395 E7EWF7 191 aa13.6□□□□□ -0.23
RFFL-205ENST00000415395 ZNF213O14771 459 aa13.6□□□□□ -0.23
RFFL-205ENST00000415395 GSTO1P78417 241 aa13.6□□□□□ -0.23
RFFL-205ENST00000415395 KIAA2012Q0VF49 1180 aa13.6□□□□□ -0.23
RFFL-205ENST00000415395 CHAF1AQ13111 956 aaPredicted RBP13.6□□□□□ -0.23
RFFL-205ENST00000415395 FOXD4L5Q5VV16 416 aaPredicted RBP13.6□□□□□ -0.23
RFFL-205ENST00000415395 DPP8Q6V1X1 898 aaPredicted RBP13.6□□□□□ -0.23
RFFL-205ENST00000415395 DHX32Q7L7V1 743 aaKnown RBP13.6□□□□□ -0.23
RFFL-205ENST00000415395 CERS3Q8IU89 383 aa13.6□□□□□ -0.23
RFFL-205ENST00000415395 FBXL16Q8N461 479 aa13.6□□□□□ -0.23
RFFL-205ENST00000415395 FOXD4L4Q8WXT5 416 aaPredicted RBP13.6□□□□□ -0.23
RFFL-205ENST00000415395 TAF6LQ9Y6J9 622 aa13.6□□□□□ -0.23
RFFL-205ENST00000415395 FAM205AQ6ZU69 1335 aa13.6□□□□□ -0.23
RFFL-205ENST00000415395 UBE2HP62256 183 aa13.59□□□□□ -0.23
RFFL-205ENST00000415395 MECOMQ03112 1051 aa13.59□□□□□ -0.23
RFFL-205ENST00000415395 GIMAP6Q6P9H5 292 aa13.59□□□□□ -0.23
RFFL-205ENST00000415395 STOX1Q6ZVD7 989 aa13.59□□□□□ -0.23
RFFL-205ENST00000415395 SLC51AQ86UW1 340 aa13.59□□□□□ -0.23
RFFL-205ENST00000415395 RIOK1Q9BRS2 568 aaKnown RBP13.59□□□□□ -0.23
RFFL-205ENST00000415395 ARMT1Q9H993 441 aa13.59□□□□□ -0.23
RFFL-205ENST00000415395 SMC3Q9UQE7 1217 aa13.59□□□□□ -0.23
RFFL-205ENST00000415395 WDR19Q8NEZ3 1342 aa13.59□□□□□ -0.23
RFFL-205ENST00000415395 GSG1L2A8MUP6 293 aa13.59□□□□□ -0.23
RFFL-205ENST00000415395 DYNC1I1O14576 645 aa13.59□□□□□ -0.23
RFFL-205ENST00000415395 APPP05067 770 aa13.59□□□□□ -0.23
RFFL-205ENST00000415395 TPM3P06753 285 aa13.59□□□□□ -0.23
RFFL-205ENST00000415395 LDHBP07195 334 aaKnown RBP13.59□□□□□ -0.23
RFFL-205ENST00000415395 ZSCAN22P10073 491 aaPredicted RBP13.59□□□□□ -0.23
RFFL-205ENST00000415395 CPA1P15085 419 aa13.59□□□□□ -0.23
RFFL-205ENST00000415395 SASS6Q6UVJ0 657 aa13.59□□□□□ -0.23
RFFL-205ENST00000415395 DZIP1Q86YF9 867 aaKnown RBP13.59□□□□□ -0.23
RFFL-205ENST00000415395 IFNL3Q8IZI9 196 aa13.59□□□□□ -0.23
RFFL-205ENST00000415395 LCORLQ8N3X6 602 aa13.59□□□□□ -0.23
RFFL-205ENST00000415395 ZC3H12CQ9C0D7 883 aaKnown RBP13.59□□□□□ -0.23
RFFL-205ENST00000415395 NAPBQ9H115 298 aa13.59□□□□□ -0.23
RFFL-205ENST00000415395 SUGT1Q9Y2Z0 365 aa13.59□□□□□ -0.23
RFFL-205ENST00000415395 R3HCC1Q9Y3T6 440 aaKnown RBP13.59□□□□□ -0.23
RFFL-205ENST00000415395 SLC4A4Q9Y6R1 1079 aa13.59□□□□□ -0.23
RFFL-205ENST00000415395 MYH2Q9UKX2 1941 aa13.59□□□□□ -0.23
RFFL-205ENST00000415395 LDHCP07864 332 aa13.58□□□□□ -0.24
RFFL-205ENST00000415395 PRDX5P30044 214 aa13.58□□□□□ -0.24
RFFL-205ENST00000415395 EXOSC10Q01780 885 aaKnown RBP13.58□□□□□ -0.24
RFFL-205ENST00000415395 TTLL5Q6EMB2 1281 aa13.58□□□□□ -0.24
RFFL-205ENST00000415395 NOL8Q76FK4 1167 aaKnown RBP13.58□□□□□ -0.24
RFFL-205ENST00000415395 ILDR1Q86SU0 546 aaPredicted RBP13.58□□□□□ -0.24
RFFL-205ENST00000415395 USP48Q86UV5 1035 aa13.58□□□□□ -0.24
RFFL-205ENST00000415395 ZNF384Q8TF68 577 aa13.58□□□□□ -0.24
RFFL-205ENST00000415395 RTFDC1Q9BY42 306 aaPredicted RBP13.58□□□□□ -0.24
RFFL-205ENST00000415395 AGXT2Q9BYV1 514 aa13.58□□□□□ -0.24
RFFL-205ENST00000415395 PDGFDQ9GZP0 370 aaPredicted RBP13.58□□□□□ -0.24
RFFL-205ENST00000415395 LAMB1P07942 1786 aa13.58□□□□□ -0.24
RFFL-205ENST00000415395 STX6O43752 255 aa13.57□□□□□ -0.24
RFFL-205ENST00000415395 ADGRA1Q86SQ6 560 aa13.57□□□□□ -0.24
RFFL-205ENST00000415395 SLF2Q8IX21 1173 aa13.57□□□□□ -0.24
RFFL-205ENST00000415395 NCOA7Q8NI08 942 aa13.57□□□□□ -0.24
RFFL-205ENST00000415395 SNED1Q8TER0 1413 aa13.57□□□□□ -0.24
RFFL-205ENST00000415395 GPR101Q96P66 508 aaPredicted RBP13.57□□□□□ -0.24
RFFL-205ENST00000415395 EPB41L4AQ9HCS5 686 aaPredicted RBP13.57□□□□□ -0.24
RFFL-205ENST00000415395 CHRNA5P30532 468 aa13.56□□□□□ -0.24
RFFL-205ENST00000415395 TRDNQ13061 729 aa13.56□□□□□ -0.24
RFFL-205ENST00000415395 TOB2Q14106 344 aaPredicted RBP13.56□□□□□ -0.24
RFFL-205ENST00000415395 RALYLQ86SE5 291 aaKnown RBP13.56□□□□□ -0.24
RFFL-205ENST00000415395 MIGA1Q8NAN2 632 aa13.56□□□□□ -0.24
RFFL-205ENST00000415395 SUPT20HQ8NEM7 779 aa13.56□□□□□ -0.24
RFFL-205ENST00000415395 C7orf43Q8WVR3 580 aa13.56□□□□□ -0.24
RFFL-205ENST00000415395 MTFR1LQ9H019 292 aa13.56□□□□□ -0.24
RFFL-205ENST00000415395 TDO2P48775 406 aa13.56□□□□□ -0.24
RFFL-205ENST00000415395 HMGN5P82970 282 aaKnown RBP13.56□□□□□ -0.24
RFFL-205ENST00000415395 CHMP4CQ96CF2 233 aa13.56□□□□□ -0.24
RFFL-205ENST00000415395 CRNKL1Q9BZJ0 848 aaKnown RBP13.56□□□□□ -0.24
RFFL-205ENST00000415395 CNNM2Q9H8M5 875 aa13.56□□□□□ -0.24
RFFL-205ENST00000415395 ATP8A2Q9NTI2 1148 aa13.56□□□□□ -0.24
RFFL-205ENST00000415395 ANAPC4Q9UJX5 808 aa13.56□□□□□ -0.24
RFFL-205ENST00000415395 F13A1P00488 732 aa13.55□□□□□ -0.24
RFFL-205ENST00000415395 PCP11498 1178 aaKnown RBP13.55□□□□□ -0.24
RFFL-205ENST00000415395 POLD1P28340 1107 aa13.55□□□□□ -0.24
RFFL-205ENST00000415395 PPP4CP60510 307 aa13.55□□□□□ -0.24
RFFL-205ENST00000415395 HAND2P61296 217 aa13.55□□□□□ -0.24
RFFL-205ENST00000415395 Q6ZUG5 572 aa13.55□□□□□ -0.24
RFFL-205ENST00000415395 PODNQ7Z5L7 613 aa13.55□□□□□ -0.24
RFFL-205ENST00000415395 MB21D2Q8IYB1 491 aaPredicted RBP13.55□□□□□ -0.24
RFFL-205ENST00000415395 RNF214Q8ND24 703 aa13.55□□□□□ -0.24
RFFL-205ENST00000415395 FAM163AQ96GL9 167 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms