RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 CHAMP1Q96JM3 812 aa15.79■□□□□ 0.12
SSR4P1-201ENST00000415143 STRBPQ96SI9 672 aaKnown RBP15.79■□□□□ 0.12
SSR4P1-201ENST00000415143 LRRC2Q9BYS8 371 aa15.79■□□□□ 0.12
SSR4P1-201ENST00000415143 NAPBQ9H115 298 aa15.79■□□□□ 0.12
SSR4P1-201ENST00000415143 RNF41Q9H4P4 317 aaPredicted RBP15.79■□□□□ 0.12
SSR4P1-201ENST00000415143 SEC31BQ9NQW1 1179 aa15.79■□□□□ 0.12
SSR4P1-201ENST00000415143 DDX19AQ9NUU7 478 aaKnown RBP15.79■□□□□ 0.12
SSR4P1-201ENST00000415143 LRP2BPQ9P2M1 347 aa15.79■□□□□ 0.12
SSR4P1-201ENST00000415143 DENND2AQ9ULE3 1009 aa15.79■□□□□ 0.12
SSR4P1-201ENST00000415143 NSFL1CQ9UNZ2 370 aaKnown RBP15.79■□□□□ 0.12
SSR4P1-201ENST00000415143 RTCBQ9Y3I0 505 aaKnown RBP15.79■□□□□ 0.12
SSR4P1-201ENST00000415143 C10orf71Q711Q0 1435 aa15.78■□□□□ 0.12
SSR4P1-201ENST00000415143 JAK2O60674 1132 aa15.78■□□□□ 0.12
SSR4P1-201ENST00000415143 RESTQ13127 1097 aa15.78■□□□□ 0.12
SSR4P1-201ENST00000415143 PI16Q6UXB8 463 aa15.78■□□□□ 0.12
SSR4P1-201ENST00000415143 SYNE3Q6ZMZ3 975 aa15.78■□□□□ 0.12
SSR4P1-201ENST00000415143 FERMT3Q86UX7 667 aa15.78■□□□□ 0.12
SSR4P1-201ENST00000415143 VPS37DQ86XT2 251 aa15.78■□□□□ 0.12
SSR4P1-201ENST00000415143 DDX11Q96FC9 970 aa15.78■□□□□ 0.12
SSR4P1-201ENST00000415143 MYH7P12883 1935 aa15.78■□□□□ 0.12
SSR4P1-201ENST00000415143 BRCA1P38398 1863 aaKnown RBP15.78■□□□□ 0.12
SSR4P1-201ENST00000415143 BCORQ6W2J9 1755 aa15.77■□□□□ 0.12
SSR4P1-201ENST00000415143 KLF18A0A0U1RQI7 1052 aa15.77■□□□□ 0.12
SSR4P1-201ENST00000415143 TCRBV5S4A2TA0A5A2 114 aa15.77■□□□□ 0.12
SSR4P1-201ENST00000415143 CCDC192P0DO97 292 aa15.77■□□□□ 0.12
SSR4P1-201ENST00000415143 HAND2P61296 217 aa15.77■□□□□ 0.12
SSR4P1-201ENST00000415143 RASGRF1Q13972 1273 aa15.77■□□□□ 0.12
SSR4P1-201ENST00000415143 SART3Q15020 963 aaKnown RBP15.77■□□□□ 0.12
SSR4P1-201ENST00000415143 ERFEQ4G0M1 354 aa15.77■□□□□ 0.12
SSR4P1-201ENST00000415143 TMTC2Q8N394 836 aa15.77■□□□□ 0.12
SSR4P1-201ENST00000415143 MAGEB6Q8N7X4 407 aa15.77■□□□□ 0.12
SSR4P1-201ENST00000415143 ANGEL1Q9UNK9 670 aaKnown RBP15.77■□□□□ 0.12
SSR4P1-201ENST00000415143 ARFGEF1Q9Y6D6 1849 aa15.76■□□□□ 0.11
SSR4P1-201ENST00000415143 GOLGA8BA8MQT2 603 aa15.76■□□□□ 0.11
SSR4P1-201ENST00000415143 ZBTB22O15209 634 aa15.76■□□□□ 0.11
SSR4P1-201ENST00000415143 CCT2P78371 535 aaKnown RBP15.76■□□□□ 0.11
SSR4P1-201ENST00000415143 NBPF5PQ86XG9 351 aaPredicted RBP15.76■□□□□ 0.11
SSR4P1-201ENST00000415143 LEO1Q8WVC0 666 aaPredicted RBP15.76■□□□□ 0.11
SSR4P1-201ENST00000415143 NUP62CLQ9H1M0 184 aa15.76■□□□□ 0.11
SSR4P1-201ENST00000415143 PDS5AQ29RF7 1337 aaKnown RBP15.75■□□□□ 0.11
SSR4P1-201ENST00000415143 AKAP11Q9UKA4 1901 aa15.75■□□□□ 0.11
SSR4P1-201ENST00000415143 ESPNB1AK53 854 aa15.75■□□□□ 0.11
SSR4P1-201ENST00000415143 CTAGE5O15320 804 aa15.75■□□□□ 0.11
SSR4P1-201ENST00000415143 MBD4O95243 580 aa15.75■□□□□ 0.11
SSR4P1-201ENST00000415143 CAVIN2O95810 425 aa15.75■□□□□ 0.11
SSR4P1-201ENST00000415143 MMP10P09238 476 aa15.75■□□□□ 0.11
SSR4P1-201ENST00000415143 TGFB2P61812 414 aa15.75■□□□□ 0.11
SSR4P1-201ENST00000415143 MAP3K11Q16584 847 aa15.75■□□□□ 0.11
SSR4P1-201ENST00000415143 BRAPQ7Z569 592 aa15.75■□□□□ 0.11
SSR4P1-201ENST00000415143 TTC6Q86TZ1 520 aa15.75■□□□□ 0.11
SSR4P1-201ENST00000415143 IFNL3Q8IZI9 196 aa15.75■□□□□ 0.11
SSR4P1-201ENST00000415143 WASF1Q92558 559 aa15.75■□□□□ 0.11
SSR4P1-201ENST00000415143 C8orf76Q96K31 380 aa15.75■□□□□ 0.11
SSR4P1-201ENST00000415143 RNF181Q9P0P0 153 aa15.75■□□□□ 0.11
SSR4P1-201ENST00000415143 DDX60Q8IY21 1712 aaKnown RBP15.74■□□□□ 0.11
SSR4P1-201ENST00000415143 SALL1Q9NSC2 1324 aa15.74■□□□□ 0.11
SSR4P1-201ENST00000415143 ERICH2A1L162 156 aa15.74■□□□□ 0.11
SSR4P1-201ENST00000415143 FOXP2O15409 715 aa15.74■□□□□ 0.11
SSR4P1-201ENST00000415143 ADRA2BP18089 450 aa15.74■□□□□ 0.11
SSR4P1-201ENST00000415143 TDO2P48775 406 aa15.74■□□□□ 0.11
SSR4P1-201ENST00000415143 BCAMP50895 628 aa15.74■□□□□ 0.11
SSR4P1-201ENST00000415143 RPS8P62241 208 aaKnown RBP15.74■□□□□ 0.11
SSR4P1-201ENST00000415143 NFXL1Q6ZNB6 911 aa15.74■□□□□ 0.11
SSR4P1-201ENST00000415143 MFSD6Q6ZSS7 791 aa15.74■□□□□ 0.11
SSR4P1-201ENST00000415143 BICD2Q8TD16 824 aa15.74■□□□□ 0.11
SSR4P1-201ENST00000415143 CCDC39Q9UFE4 941 aa15.74■□□□□ 0.11
SSR4P1-201ENST00000415143 RCOR1Q9UKL0 485 aa15.74■□□□□ 0.11
SSR4P1-201ENST00000415143 SLC4A4Q9Y6R1 1079 aa15.74■□□□□ 0.11
SSR4P1-201ENST00000415143 ZNF804BA4D1E1 1349 aa15.73■□□□□ 0.11
SSR4P1-201ENST00000415143 GNPATO15228 680 aa15.73■□□□□ 0.11
SSR4P1-201ENST00000415143 NPHP1O15259 732 aa15.73■□□□□ 0.11
SSR4P1-201ENST00000415143 CTDNEP1O95476 244 aa15.73■□□□□ 0.11
SSR4P1-201ENST00000415143 PCP11498 1178 aaKnown RBP15.73■□□□□ 0.11
SSR4P1-201ENST00000415143 DPEP1P16444 411 aa15.73■□□□□ 0.11
SSR4P1-201ENST00000415143 CYP7A1P22680 504 aa15.73■□□□□ 0.11
SSR4P1-201ENST00000415143 CLCN1P35523 988 aa15.73■□□□□ 0.11
SSR4P1-201ENST00000415143 LIFRP42702 1097 aa15.73■□□□□ 0.11
SSR4P1-201ENST00000415143 NT5C2P49902 561 aa15.73■□□□□ 0.11
SSR4P1-201ENST00000415143 METAP2P50579 478 aaKnown RBP eCLIP15.73■□□□□ 0.11
SSR4P1-201ENST00000415143 COL9A3Q14050 684 aaPredicted RBP15.73■□□□□ 0.11
SSR4P1-201ENST00000415143 AKNAD1Q5T1N1 836 aa15.73■□□□□ 0.11
SSR4P1-201ENST00000415143 CHST3Q7LGC8 479 aa15.73■□□□□ 0.11
SSR4P1-201ENST00000415143 PDLIM2Q96JY6 352 aa15.73■□□□□ 0.11
SSR4P1-201ENST00000415143 RAI14Q9P0K7 980 aa15.73■□□□□ 0.11
SSR4P1-201ENST00000415143 ORC3Q9UBD5 711 aaPredicted RBP15.73■□□□□ 0.11
SSR4P1-201ENST00000415143 MINPP1Q9UNW1 487 aa15.73■□□□□ 0.11
SSR4P1-201ENST00000415143 SBF1O95248 1867 aa15.73■□□□□ 0.11
SSR4P1-201ENST00000415143 LAMA4Q16363 1823 aa15.73■□□□□ 0.11
SSR4P1-201ENST00000415143 MAGEB6P1A0A0J9YX57 407 aa15.72■□□□□ 0.11
SSR4P1-201ENST00000415143 CCDC196A0A1B0GTZ2 297 aa15.72■□□□□ 0.11
SSR4P1-201ENST00000415143 CCDC69A6NI79 296 aa15.72■□□□□ 0.11
SSR4P1-201ENST00000415143 SH2B2O14492 632 aaPredicted RBP15.72■□□□□ 0.11
SSR4P1-201ENST00000415143 FOXN1O15353 648 aa15.72■□□□□ 0.11
SSR4P1-201ENST00000415143 MSNP26038 577 aaKnown RBP15.72■□□□□ 0.11
SSR4P1-201ENST00000415143 RFC4P35249 363 aa15.72■□□□□ 0.11
SSR4P1-201ENST00000415143 RCAN1P53805 252 aa15.72■□□□□ 0.11
SSR4P1-201ENST00000415143 TRIM29Q14134 588 aa15.72■□□□□ 0.11
SSR4P1-201ENST00000415143 PPP2R5BQ15173 497 aa15.72■□□□□ 0.11
SSR4P1-201ENST00000415143 TMEM67Q5HYA8 995 aa15.72■□□□□ 0.11
SSR4P1-201ENST00000415143 TRAPPC3LQ5T215 181 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms