RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 PHAXQ9H814 394 aaKnown RBP17.12■□□□□ 0.33
RAPGEF1-204ENST00000414781 ITGA6P23229 1130 aa17.11■□□□□ 0.33
RAPGEF1-204ENST00000414781 FLT3LGP49771 235 aa17.11■□□□□ 0.33
RAPGEF1-204ENST00000414781 SLFN5Q08AF3 891 aa17.11■□□□□ 0.33
RAPGEF1-204ENST00000414781 DCAF15Q66K64 600 aa17.11■□□□□ 0.33
RAPGEF1-204ENST00000414781 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.11■□□□□ 0.33
RAPGEF1-204ENST00000414781 ZKSCAN4Q969J2 545 aaPredicted RBP17.11■□□□□ 0.33
RAPGEF1-204ENST00000414781 NBPF3Q9H094 633 aa17.11■□□□□ 0.33
RAPGEF1-204ENST00000414781 GABRQQ9UN88 632 aa17.11■□□□□ 0.33
RAPGEF1-204ENST00000414781 TTF2Q9UNY4 1162 aaKnown RBP17.11■□□□□ 0.33
RAPGEF1-204ENST00000414781 ELNP15502 786 aa17.1■□□□□ 0.33
RAPGEF1-204ENST00000414781 DIS3LQ8TF46 1054 aaKnown RBP17.1■□□□□ 0.33
RAPGEF1-204ENST00000414781 CHMP4AQ9BY43 222 aa17.1■□□□□ 0.33
RAPGEF1-204ENST00000414781 KCNH4Q9UQ05 1017 aa17.1■□□□□ 0.33
RAPGEF1-204ENST00000414781 ARAP2Q8WZ64 1704 aa17.1■□□□□ 0.33
RAPGEF1-204ENST00000414781 SPEF2Q9C093 1822 aa17.1■□□□□ 0.33
RAPGEF1-204ENST00000414781 SYN1P17600 705 aa17.09■□□□□ 0.33
RAPGEF1-204ENST00000414781 MFSD14BQ5SR56 506 aa17.09■□□□□ 0.33
RAPGEF1-204ENST00000414781 NEXNQ0ZGT2 675 aa17.08■□□□□ 0.32
RAPGEF1-204ENST00000414781 PLA2G12BQ9BX93 195 aa17.08■□□□□ 0.32
RAPGEF1-204ENST00000414781 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.08■□□□□ 0.32
RAPGEF1-204ENST00000414781 JAG2Q9Y219 1238 aa17.08■□□□□ 0.32
RAPGEF1-204ENST00000414781 TNPO2O14787 897 aaKnown RBP17.07■□□□□ 0.32
RAPGEF1-204ENST00000414781 IGKV5-2P06315 115 aa17.07■□□□□ 0.32
RAPGEF1-204ENST00000414781 ZNF853P0CG23 659 aa17.07■□□□□ 0.32
RAPGEF1-204ENST00000414781 CRKP46108 304 aa17.07■□□□□ 0.32
RAPGEF1-204ENST00000414781 ZNF697Q5TEC3 545 aa17.07■□□□□ 0.32
RAPGEF1-204ENST00000414781 FAM83AQ86UY5 434 aa17.07■□□□□ 0.32
RAPGEF1-204ENST00000414781 TRMT2AQ8IZ69 625 aaKnown RBP17.07■□□□□ 0.32
RAPGEF1-204ENST00000414781 CDCA7LQ96GN5 454 aa17.07■□□□□ 0.32
RAPGEF1-204ENST00000414781 ZNF341Q9BYN7 854 aa17.07■□□□□ 0.32
RAPGEF1-204ENST00000414781 C11orf49Q9H6J7 331 aa17.07■□□□□ 0.32
RAPGEF1-204ENST00000414781 TMOD2Q9NZR1 351 aa17.07■□□□□ 0.32
RAPGEF1-204ENST00000414781 MAP3K2Q9Y2U5 619 aa17.07■□□□□ 0.32
RAPGEF1-204ENST00000414781 MYH3P11055 1940 aa17.06■□□□□ 0.32
RAPGEF1-204ENST00000414781 ALPK3Q96L96 1907 aa17.06■□□□□ 0.32
RAPGEF1-204ENST00000414781 RPAP1Q9BWH6 1393 aaPredicted RBP17.06■□□□□ 0.32
RAPGEF1-204ENST00000414781 PLA2G5P39877 138 aa17.06■□□□□ 0.32
RAPGEF1-204ENST00000414781 FKBP1CQ5VVH2 108 aa17.06■□□□□ 0.32
RAPGEF1-204ENST00000414781 MAFAQ8NHW3 353 aaPredicted RBP17.06■□□□□ 0.32
RAPGEF1-204ENST00000414781 COL2A1P02458 1487 aaPredicted RBP17.05■□□□□ 0.32
RAPGEF1-204ENST00000414781 HDLBPQ00341 1268 aaKnown RBP17.05■□□□□ 0.32
RAPGEF1-204ENST00000414781 MOGSQ13724 837 aa17.05■□□□□ 0.32
RAPGEF1-204ENST00000414781 KSR2Q6VAB6 950 aa17.05■□□□□ 0.32
RAPGEF1-204ENST00000414781 UBE3BQ7Z3V4 1068 aa17.05■□□□□ 0.32
RAPGEF1-204ENST00000414781 ANKRD18BA2A2Z9 1011 aa17.04■□□□□ 0.32
RAPGEF1-204ENST00000414781 H7C1W4 665 aa17.04■□□□□ 0.32
RAPGEF1-204ENST00000414781 SNAP23O00161 211 aa17.04■□□□□ 0.32
RAPGEF1-204ENST00000414781 TAF5LO75529 589 aa17.04■□□□□ 0.32
RAPGEF1-204ENST00000414781 CSF1RP07333 972 aa17.04■□□□□ 0.32
RAPGEF1-204ENST00000414781 COA7Q96BR5 231 aa17.04■□□□□ 0.32
RAPGEF1-204ENST00000414781 CXCL11O14625 94 aa17.03■□□□□ 0.32
RAPGEF1-204ENST00000414781 CT47B1P0C2W7 299 aaPredicted RBP17.03■□□□□ 0.32
RAPGEF1-204ENST00000414781 CYP2C8P10632 490 aa17.03■□□□□ 0.32
RAPGEF1-204ENST00000414781 FAM122AQ96E09 287 aa17.03■□□□□ 0.32
RAPGEF1-204ENST00000414781 FAM161BQ96MY7 647 aa17.03■□□□□ 0.32
RAPGEF1-204ENST00000414781 SPINK5Q9NQ38 1064 aaPredicted RBP17.03■□□□□ 0.32
RAPGEF1-204ENST00000414781 MBIPQ9NS73 344 aa17.03■□□□□ 0.32
RAPGEF1-204ENST00000414781 NEURL1BA8MQ27 555 aa17.02■□□□□ 0.32
RAPGEF1-204ENST00000414781 HMGCRP04035 888 aa17.02■□□□□ 0.32
RAPGEF1-204ENST00000414781 FASTKD5Q7L8L6 764 aaKnown RBP17.02■□□□□ 0.32
RAPGEF1-204ENST00000414781 TDRD7Q8NHU6 1098 aaKnown RBP17.02■□□□□ 0.32
RAPGEF1-204ENST00000414781 CDX2Q99626 313 aaPredicted RBP17.02■□□□□ 0.32
RAPGEF1-204ENST00000414781 TAOK2Q9UL54 1235 aa17.02■□□□□ 0.32
RAPGEF1-204ENST00000414781 SLC45A1Q9Y2W3 748 aa17.02■□□□□ 0.32
RAPGEF1-204ENST00000414781 FANCIQ9NVI1 1328 aa17.01■□□□□ 0.31
RAPGEF1-204ENST00000414781 PI4KAP2A4QPH2 592 aa17.01■□□□□ 0.31
RAPGEF1-204ENST00000414781 TNFRSF10AO00220 468 aa17.01■□□□□ 0.31
RAPGEF1-204ENST00000414781 INPP5BP32019 993 aa17.01■□□□□ 0.31
RAPGEF1-204ENST00000414781 NOL9Q5SY16 702 aaKnown RBP17.01■□□□□ 0.31
RAPGEF1-204ENST00000414781 CCDC30Q5VVM6 783 aa17.01■□□□□ 0.31
RAPGEF1-204ENST00000414781 GPAT2Q6NUI2 795 aa17.01■□□□□ 0.31
RAPGEF1-204ENST00000414781 PI4KAP1Q8N8J0 262 aa17.01■□□□□ 0.31
RAPGEF1-204ENST00000414781 TEKT1Q969V4 418 aa17.01■□□□□ 0.31
RAPGEF1-204ENST00000414781 HMX1Q9NP08 348 aaPredicted RBP17.01■□□□□ 0.31
RAPGEF1-204ENST00000414781 CACNB3P54284 484 aa17■□□□□ 0.31
RAPGEF1-204ENST00000414781 CWF19L2Q2TBE0 894 aaKnown RBP17■□□□□ 0.31
RAPGEF1-204ENST00000414781 TSR2Q969E8 191 aaKnown RBP17■□□□□ 0.31
RAPGEF1-204ENST00000414781 ZNF112Q9UJU3 913 aa17■□□□□ 0.31
RAPGEF1-204ENST00000414781 OGDHLQ9ULD0 1010 aa17■□□□□ 0.31
RAPGEF1-204ENST00000414781 IFIT5Q13325 482 aaKnown RBP16.99■□□□□ 0.31
RAPGEF1-204ENST00000414781 SMCR8Q8TEV9 937 aaPredicted RBP16.99■□□□□ 0.31
RAPGEF1-204ENST00000414781 TBC1D22AQ8WUA7 517 aa16.99■□□□□ 0.31
RAPGEF1-204ENST00000414781 MGAMO43451 1857 aa16.99■□□□□ 0.31
RAPGEF1-204ENST00000414781 HIBADHP31937 336 aaKnown RBP16.98■□□□□ 0.31
RAPGEF1-204ENST00000414781 MDM2Q00987 491 aaPredicted RBP16.98■□□□□ 0.31
RAPGEF1-204ENST00000414781 EXOSC9Q06265 439 aaKnown RBP16.98■□□□□ 0.31
RAPGEF1-204ENST00000414781 GCKRQ14397 625 aa16.98■□□□□ 0.31
RAPGEF1-204ENST00000414781 TJAP1Q5JTD0 557 aa16.98■□□□□ 0.31
RAPGEF1-204ENST00000414781 MIGA2Q7L4E1 593 aa16.98■□□□□ 0.31
RAPGEF1-204ENST00000414781 ZDHHC15Q96MV8 337 aa16.98■□□□□ 0.31
RAPGEF1-204ENST00000414781 LBHD1Q9BQE6 289 aaPredicted RBP16.98■□□□□ 0.31
RAPGEF1-204ENST00000414781 MRIQ9BWK5 157 aa16.98■□□□□ 0.31
RAPGEF1-204ENST00000414781 PFASO15067 1338 aa16.97■□□□□ 0.31
RAPGEF1-204ENST00000414781 A0A0G2JLL6 359 aaPredicted RBP16.97■□□□□ 0.31
RAPGEF1-204ENST00000414781 PRRT2Q7Z6L0 340 aaPredicted RBP16.97■□□□□ 0.31
RAPGEF1-204ENST00000414781 MAST3O60307 1309 aa16.96■□□□□ 0.31
RAPGEF1-204ENST00000414781 ELL2O00472 640 aaPredicted RBP16.96■□□□□ 0.31
RAPGEF1-204ENST00000414781 CASP7P55210 303 aa16.96■□□□□ 0.31
RAPGEF1-204ENST00000414781 UBE4AQ14139 1066 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms