RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 ZSCAN31Q96LW9 406 aaPredicted RBP9.8□□□□□ -0.84
HDAC9-207ENST00000413509 VPS33BQ9H267 617 aa9.8□□□□□ -0.84
HDAC9-207ENST00000413509 CWC22Q9HCG8 908 aaKnown RBP9.8□□□□□ -0.84
HDAC9-207ENST00000413509 SH2B1Q9NRF2 756 aaPredicted RBP9.8□□□□□ -0.84
HDAC9-207ENST00000413509 CHMP5Q9NZZ3 219 aa9.8□□□□□ -0.84
HDAC9-207ENST00000413509 MKRN1Q9UHC7 482 aaKnown RBP9.8□□□□□ -0.84
HDAC9-207ENST00000413509 CD2APQ9Y5K6 639 aa9.8□□□□□ -0.84
HDAC9-207ENST00000413509 SLC4A4Q9Y6R1 1079 aa9.8□□□□□ -0.84
HDAC9-207ENST00000413509 NAV1Q8NEY1 1877 aa9.8□□□□□ -0.84
HDAC9-207ENST00000413509 MROH7-TTC4A0A0A0MT08 1334 aa9.8□□□□□ -0.84
HDAC9-207ENST00000413509 ARFGEF1Q9Y6D6 1849 aa9.79□□□□□ -0.84
HDAC9-207ENST00000413509 GPR75-ASB3A0A0A6YYF3 556 aa9.79□□□□□ -0.84
HDAC9-207ENST00000413509 ZNF213O14771 459 aa9.79□□□□□ -0.84
HDAC9-207ENST00000413509 FGRP09769 529 aa9.79□□□□□ -0.84
HDAC9-207ENST00000413509 DYNLL1P63167 89 aaKnown RBP9.79□□□□□ -0.84
HDAC9-207ENST00000413509 MFSD14BQ5SR56 506 aa9.79□□□□□ -0.84
HDAC9-207ENST00000413509 RTKN2Q8IZC4 609 aa9.79□□□□□ -0.84
HDAC9-207ENST00000413509 CERS5Q8N5B7 392 aa9.79□□□□□ -0.84
HDAC9-207ENST00000413509 STAG1Q8WVM7 1258 aa9.79□□□□□ -0.84
HDAC9-207ENST00000413509 NACAP1Q9BZK3 213 aa9.79□□□□□ -0.84
HDAC9-207ENST00000413509 NAPBQ9H115 298 aa9.79□□□□□ -0.84
HDAC9-207ENST00000413509 SLKQ9H2G2 1235 aaPredicted RBP9.79□□□□□ -0.84
HDAC9-207ENST00000413509 ATP8A2Q9NTI2 1148 aa9.79□□□□□ -0.84
HDAC9-207ENST00000413509 JAG2Q9Y219 1238 aa9.79□□□□□ -0.84
HDAC9-207ENST00000413509 TACC3Q9Y6A5 838 aa9.79□□□□□ -0.84
HDAC9-207ENST00000413509 COL4A5P29400 1685 aa9.79□□□□□ -0.84
HDAC9-207ENST00000413509 RIMBP2O15034 1052 aa9.78□□□□□ -0.84
HDAC9-207ENST00000413509 LARGE1O95461 756 aa9.78□□□□□ -0.84
HDAC9-207ENST00000413509 LDHCP07864 332 aa9.78□□□□□ -0.84
HDAC9-207ENST00000413509 ANTXR2P58335 489 aa9.78□□□□□ -0.84
HDAC9-207ENST00000413509 HAND2P61296 217 aa9.78□□□□□ -0.84
HDAC9-207ENST00000413509 GTF2IP78347 998 aa9.78□□□□□ -0.84
HDAC9-207ENST00000413509 ST3GAL1Q11201 340 aa9.78□□□□□ -0.84
HDAC9-207ENST00000413509 SBK1Q52WX2 424 aa9.78□□□□□ -0.84
HDAC9-207ENST00000413509 SOGA3Q5TF21 947 aa9.78□□□□□ -0.84
HDAC9-207ENST00000413509 STRIP1Q5VSL9 837 aa9.78□□□□□ -0.84
HDAC9-207ENST00000413509 MRIQ9BWK5 157 aa9.78□□□□□ -0.84
HDAC9-207ENST00000413509 CRNKL1Q9BZJ0 848 aaKnown RBP9.78□□□□□ -0.84
HDAC9-207ENST00000413509 DCP1AQ9NPI6 582 aaPredicted RBP9.78□□□□□ -0.84
HDAC9-207ENST00000413509 TPCN1Q9ULQ1 816 aa9.78□□□□□ -0.84
HDAC9-207ENST00000413509 ATF5Q9Y2D1 282 aaPredicted RBP9.78□□□□□ -0.84
HDAC9-207ENST00000413509 ECM29Q5VYK3 1845 aa9.77□□□□□ -0.84
HDAC9-207ENST00000413509 ROBO3Q96MS0 1386 aa9.77□□□□□ -0.84
HDAC9-207ENST00000413509 C21orf2O43822 256 aa9.77□□□□□ -0.85
HDAC9-207ENST00000413509 ECE2O60344 883 aa9.77□□□□□ -0.85
HDAC9-207ENST00000413509 APPP05067 770 aa9.77□□□□□ -0.85
HDAC9-207ENST00000413509 PCP11498 1178 aaKnown RBP9.77□□□□□ -0.85
HDAC9-207ENST00000413509 MCM5P33992 734 aa9.77□□□□□ -0.85
HDAC9-207ENST00000413509 DIXDC1Q155Q3 683 aa9.77□□□□□ -0.85
HDAC9-207ENST00000413509 ME3Q16798 604 aa9.77□□□□□ -0.85
HDAC9-207ENST00000413509 DOK7Q18PE1 504 aa9.77□□□□□ -0.85
HDAC9-207ENST00000413509 DACT2Q5SW24 774 aa9.77□□□□□ -0.85
HDAC9-207ENST00000413509 AKNAD1Q5T1N1 836 aa9.77□□□□□ -0.85
HDAC9-207ENST00000413509 Q6ZUG5 572 aa9.77□□□□□ -0.85
HDAC9-207ENST00000413509 SLF2Q8IX21 1173 aa9.77□□□□□ -0.85
HDAC9-207ENST00000413509 NCOA7Q8NI08 942 aa9.77□□□□□ -0.85
HDAC9-207ENST00000413509 NKX2-3Q8TAU0 364 aa9.77□□□□□ -0.85
HDAC9-207ENST00000413509 SDR42E1Q8WUS8 393 aa9.77□□□□□ -0.85
HDAC9-207ENST00000413509 MTA3Q9BTC8 594 aa9.77□□□□□ -0.85
HDAC9-207ENST00000413509 AATFQ9NY61 560 aaKnown RBP eCLIP9.77□□□□□ -0.85
HDAC9-207ENST00000413509 PIM2Q9P1W9 311 aa9.77□□□□□ -0.85
HDAC9-207ENST00000413509 ADAMTSL1Q8N6G6 1762 aa9.77□□□□□ -0.85
HDAC9-207ENST00000413509 NEDD4P46934 1319 aa9.77□□□□□ -0.85
HDAC9-207ENST00000413509 BAG3O95817 575 aa9.76□□□□□ -0.85
HDAC9-207ENST00000413509 PLCG2P16885 1265 aa9.76□□□□□ -0.85
HDAC9-207ENST00000413509 TDO2P48775 406 aa9.76□□□□□ -0.85
HDAC9-207ENST00000413509 NT5C2P49902 561 aa9.76□□□□□ -0.85
HDAC9-207ENST00000413509 RHBDL3P58872 404 aa9.76□□□□□ -0.85
HDAC9-207ENST00000413509 HDLBPQ00341 1268 aaKnown RBP9.76□□□□□ -0.85
HDAC9-207ENST00000413509 PPARAQ07869 468 aa9.76□□□□□ -0.85
HDAC9-207ENST00000413509 RAB3GAP1Q15042 981 aa9.76□□□□□ -0.85
HDAC9-207ENST00000413509 AOC3Q16853 763 aa9.76□□□□□ -0.85
HDAC9-207ENST00000413509 CTR9Q6PD62 1173 aa9.76□□□□□ -0.85
HDAC9-207ENST00000413509 HHIPL2Q6UWX4 724 aa9.76□□□□□ -0.85
HDAC9-207ENST00000413509 CLEC17AQ6ZS10 378 aa9.76□□□□□ -0.85
HDAC9-207ENST00000413509 SPRYD3Q8NCJ5 442 aa9.76□□□□□ -0.85
HDAC9-207ENST00000413509 SH3RF3Q8TEJ3 882 aaPredicted RBP9.76□□□□□ -0.85
HDAC9-207ENST00000413509 TCEANC2Q96MN5 208 aa9.76□□□□□ -0.85
HDAC9-207ENST00000413509 CNNM2Q9H8M5 875 aa9.76□□□□□ -0.85
HDAC9-207ENST00000413509 DBNDD1Q9H9R9 158 aa9.76□□□□□ -0.85
HDAC9-207ENST00000413509 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.76□□□□□ -0.85
HDAC9-207ENST00000413509 DAGLAQ9Y4D2 1042 aa9.76□□□□□ -0.85
HDAC9-207ENST00000413509 LTBP3Q9NS15 1303 aa9.76□□□□□ -0.85
HDAC9-207ENST00000413509 NID2Q14112 1375 aa9.75□□□□□ -0.85
HDAC9-207ENST00000413509 USP17L3A6NCW0 530 aa9.75□□□□□ -0.85
HDAC9-207ENST00000413509 USP17L4A6NCW7 530 aa9.75□□□□□ -0.85
HDAC9-207ENST00000413509 YDJCA8MPS7 323 aa9.75□□□□□ -0.85
HDAC9-207ENST00000413509 PRC1O43663 620 aa9.75□□□□□ -0.85
HDAC9-207ENST00000413509 ORC4O43929 436 aa9.75□□□□□ -0.85
HDAC9-207ENST00000413509 PFKFB2O60825 505 aa9.75□□□□□ -0.85
HDAC9-207ENST00000413509 HSP90AA1P07900 732 aaKnown RBP9.75□□□□□ -0.85
HDAC9-207ENST00000413509 BTDP43251 543 aa9.75□□□□□ -0.85
HDAC9-207ENST00000413509 CTDSPL2Q05D32 466 aa9.75□□□□□ -0.85
HDAC9-207ENST00000413509 DALRD3Q5D0E6 543 aaKnown RBP9.75□□□□□ -0.85
HDAC9-207ENST00000413509 CYB5R4Q7L1T6 521 aa9.75□□□□□ -0.85
HDAC9-207ENST00000413509 USP17L1Q7RTZ2 530 aa9.75□□□□□ -0.85
HDAC9-207ENST00000413509 GTF3C6Q969F1 213 aa9.75□□□□□ -0.85
HDAC9-207ENST00000413509 ZNF274Q96GC6 653 aaPredicted RBP9.75□□□□□ -0.85
HDAC9-207ENST00000413509 KRT23Q9C075 422 aa9.75□□□□□ -0.85
HDAC9-207ENST00000413509 RNF41Q9H4P4 317 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms