RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 ZNF76P36508 570 aa9.87□□□□□ -0.83
SYNE1-211ENST00000413186 ZMYM1Q5SVZ6 1142 aa9.87□□□□□ -0.83
SYNE1-211ENST00000413186 MYO3BQ8WXR4 1341 aa9.87□□□□□ -0.83
SYNE1-211ENST00000413186 GOLGA6L19H0YKK7 550 aa9.87□□□□□ -0.83
SYNE1-211ENST00000413186 NLRP5P59047 1200 aa9.87□□□□□ -0.83
SYNE1-211ENST00000413186 STYK1Q6J9G0 422 aa9.87□□□□□ -0.83
SYNE1-211ENST00000413186 COL23A1Q86Y22 540 aaPredicted RBP9.87□□□□□ -0.83
SYNE1-211ENST00000413186 CCDC82Q8N4S0 544 aa9.87□□□□□ -0.83
SYNE1-211ENST00000413186 TMX3Q96JJ7 454 aa9.87□□□□□ -0.83
SYNE1-211ENST00000413186 TM6SF1Q9BZW5 370 aa9.87□□□□□ -0.83
SYNE1-211ENST00000413186 RIPOR2Q9Y4F9 1068 aa9.87□□□□□ -0.83
SYNE1-211ENST00000413186 FAM208AQ9UK61 1670 aaKnown RBP9.87□□□□□ -0.83
SYNE1-211ENST00000413186 USP17L3A6NCW0 530 aa9.87□□□□□ -0.83
SYNE1-211ENST00000413186 USP17L4A6NCW7 530 aa9.87□□□□□ -0.83
SYNE1-211ENST00000413186 USP17L1Q7RTZ2 530 aa9.87□□□□□ -0.83
SYNE1-211ENST00000413186 CCDC148Q8NFR7 591 aa9.87□□□□□ -0.83
SYNE1-211ENST00000413186 TSPYL1Q9H0U9 437 aa9.87□□□□□ -0.83
SYNE1-211ENST00000413186 CCDC194A0A1B0GVG4 234 aa9.86□□□□□ -0.83
SYNE1-211ENST00000413186 TGFBRAP1Q8WUH2 860 aa9.86□□□□□ -0.83
SYNE1-211ENST00000413186 FAM13BQ9NYF5 915 aa9.86□□□□□ -0.83
SYNE1-211ENST00000413186 SAP30BPQ9UHR5 308 aaKnown RBP9.86□□□□□ -0.83
SYNE1-211ENST00000413186 ME1P48163 572 aa9.86□□□□□ -0.83
SYNE1-211ENST00000413186 PPP2R5BQ15173 497 aa9.86□□□□□ -0.83
SYNE1-211ENST00000413186 AXDND1Q5T1B0 1012 aaPredicted RBP9.86□□□□□ -0.83
SYNE1-211ENST00000413186 SASS6Q6UVJ0 657 aa9.86□□□□□ -0.83
SYNE1-211ENST00000413186 MAPKAPK5Q8IW41 473 aa9.86□□□□□ -0.83
SYNE1-211ENST00000413186 PKNOX2Q96KN3 472 aa9.86□□□□□ -0.83
SYNE1-211ENST00000413186 TPM3P06753 285 aa9.86□□□□□ -0.83
SYNE1-211ENST00000413186 TPM2P07951 284 aa9.86□□□□□ -0.83
SYNE1-211ENST00000413186 HSPA4P34932 840 aa9.86□□□□□ -0.83
SYNE1-211ENST00000413186 BTDP43251 543 aa9.86□□□□□ -0.83
SYNE1-211ENST00000413186 NT5C2P49902 561 aa9.86□□□□□ -0.83
SYNE1-211ENST00000413186 CIAPIN1Q6FI81 312 aa9.86□□□□□ -0.83
SYNE1-211ENST00000413186 SCAND2PQ9GZW5 306 aaPredicted RBP9.86□□□□□ -0.83
SYNE1-211ENST00000413186 MTFR1LQ9H019 292 aa9.86□□□□□ -0.83
SYNE1-211ENST00000413186 DBNDD1Q9H9R9 158 aa9.86□□□□□ -0.83
SYNE1-211ENST00000413186 ARHGEF10LQ9HCE6 1279 aa9.86□□□□□ -0.83
SYNE1-211ENST00000413186 RBM28Q9NW13 759 aaKnown RBP9.86□□□□□ -0.83
SYNE1-211ENST00000413186 ATP6V0A2Q9Y487 856 aa9.86□□□□□ -0.83
SYNE1-211ENST00000413186 A0A0D9SFI3 127 aa9.85□□□□□ -0.83
SYNE1-211ENST00000413186 RASGRF1Q13972 1273 aa9.85□□□□□ -0.83
SYNE1-211ENST00000413186 AKNAD1Q5T1N1 836 aa9.85□□□□□ -0.83
SYNE1-211ENST00000413186 SMIM5Q71RC9 77 aa9.85□□□□□ -0.83
SYNE1-211ENST00000413186 ANKRD20A12PQ8NF67 263 aa9.85□□□□□ -0.83
SYNE1-211ENST00000413186 SLC26A6Q9BXS9 759 aa9.85□□□□□ -0.83
SYNE1-211ENST00000413186 PEAK1Q9H792 1746 aa9.85□□□□□ -0.83
SYNE1-211ENST00000413186 PSDA5PKW4 1024 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-211ENST00000413186 ADD2P35612 726 aa9.85□□□□□ -0.83
SYNE1-211ENST00000413186 DCAF15Q66K64 600 aa9.85□□□□□ -0.83
SYNE1-211ENST00000413186 IFNL3Q8IZI9 196 aa9.85□□□□□ -0.83
SYNE1-211ENST00000413186 SPATA32Q96LK8 384 aa9.85□□□□□ -0.83
SYNE1-211ENST00000413186 TCEANC2Q96MN5 208 aa9.85□□□□□ -0.83
SYNE1-211ENST00000413186 LRRC2Q9BYS8 371 aa9.85□□□□□ -0.83
SYNE1-211ENST00000413186 PARP4Q9UKK3 1724 aaKnown RBP9.85□□□□□ -0.83
SYNE1-211ENST00000413186 RPS6KB1P23443 525 aa9.85□□□□□ -0.83
SYNE1-211ENST00000413186 PAXIP1Q6ZW49 1069 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-211ENST00000413186 CD209Q9NNX6 404 aa9.85□□□□□ -0.83
SYNE1-211ENST00000413186 PICK1Q9NRD5 415 aa9.85□□□□□ -0.83
SYNE1-211ENST00000413186 ANGEL1Q9UNK9 670 aaKnown RBP9.85□□□□□ -0.83
SYNE1-211ENST00000413186 RPAP1Q9BWH6 1393 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-211ENST00000413186 GJB2P29033 226 aa9.85□□□□□ -0.83
SYNE1-211ENST00000413186 B4E1Z4 1266 aa9.84□□□□□ -0.83
SYNE1-211ENST00000413186 HSPD1P10809 573 aaKnown RBP9.84□□□□□ -0.83
SYNE1-211ENST00000413186 CCDC144CPQ8IYA2 1237 aa9.84□□□□□ -0.83
SYNE1-211ENST00000413186 SNX14Q9Y5W7 946 aa9.84□□□□□ -0.83
SYNE1-211ENST00000413186 UBN2Q6ZU65 1347 aa9.84□□□□□ -0.83
SYNE1-211ENST00000413186 LMO7Q8WWI1 1683 aa9.84□□□□□ -0.83
SYNE1-211ENST00000413186 USP17L12C9JPN9 530 aa9.84□□□□□ -0.83
SYNE1-211ENST00000413186 USP17L21D6R901 530 aa9.84□□□□□ -0.83
SYNE1-211ENST00000413186 CEBPZQ03701 1054 aaKnown RBP9.84□□□□□ -0.83
SYNE1-211ENST00000413186 PPARAQ07869 468 aa9.84□□□□□ -0.83
SYNE1-211ENST00000413186 PI4K2BQ8TCG2 481 aa9.84□□□□□ -0.83
SYNE1-211ENST00000413186 RAB34Q9BZG1 259 aa9.84□□□□□ -0.83
SYNE1-211ENST00000413186 VAT1LQ9HCJ6 419 aa9.84□□□□□ -0.83
SYNE1-211ENST00000413186 RFX7Q2KHR2 1363 aa9.84□□□□□ -0.83
SYNE1-211ENST00000413186 AK2P54819 239 aa9.84□□□□□ -0.83
SYNE1-211ENST00000413186 ATG9AQ7Z3C6 839 aa9.84□□□□□ -0.83
SYNE1-211ENST00000413186 USP48Q86UV5 1035 aa9.84□□□□□ -0.83
SYNE1-211ENST00000413186 INTS4Q96HW7 963 aaKnown RBP9.84□□□□□ -0.83
SYNE1-211ENST00000413186 STX6O43752 255 aa9.84□□□□□ -0.83
SYNE1-211ENST00000413186 ONECUT3O60422 494 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-211ENST00000413186 PRPF40AO75400 957 aaKnown RBP9.84□□□□□ -0.83
SYNE1-211ENST00000413186 SCNN1DP51172 638 aa9.84□□□□□ -0.83
SYNE1-211ENST00000413186 ZNF771Q7L3S4 317 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-211ENST00000413186 ZSCAN16Q9H4T2 348 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-211ENST00000413186 CALML3P27482 149 aa9.83□□□□□ -0.84
SYNE1-211ENST00000413186 NASPP49321 788 aaPredicted RBP9.83□□□□□ -0.84
SYNE1-211ENST00000413186 MPHOSPH6Q99547 160 aaKnown RBP9.83□□□□□ -0.84
SYNE1-211ENST00000413186 SUGT1Q9Y2Z0 365 aa9.83□□□□□ -0.84
SYNE1-211ENST00000413186 FERMT3Q86UX7 667 aa9.83□□□□□ -0.84
SYNE1-211ENST00000413186 DYDC1Q8WWB3 177 aa9.83□□□□□ -0.84
SYNE1-211ENST00000413186 SLC4A9Q96Q91 983 aa9.83□□□□□ -0.84
SYNE1-211ENST00000413186 LARP6Q9BRS8 491 aaKnown RBP9.83□□□□□ -0.84
SYNE1-211ENST00000413186 BCL9LQ86UU0 1499 aa9.83□□□□□ -0.84
SYNE1-211ENST00000413186 MCAMP43121 646 aa9.83□□□□□ -0.84
SYNE1-211ENST00000413186 GPSM2P81274 684 aa9.83□□□□□ -0.84
SYNE1-211ENST00000413186 POTEAQ6S8J7 498 aa9.83□□□□□ -0.84
SYNE1-211ENST00000413186 NAT10Q9H0A0 1025 aaKnown RBP9.83□□□□□ -0.84
SYNE1-211ENST00000413186 ATRNO75882 1429 aa9.83□□□□□ -0.84
SYNE1-211ENST00000413186 TCP10Q12799 353 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms