RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 OTOFQ9HC10 1997 aa16.06■□□□□ 0.16
HDAC8-210ENST00000412342 RPAP1Q9BWH6 1393 aaPredicted RBP16.06■□□□□ 0.16
HDAC8-210ENST00000412342 RHBDL3P58872 404 aa16.06■□□□□ 0.16
HDAC8-210ENST00000412342 ADGRA1Q86SQ6 560 aa16.06■□□□□ 0.16
HDAC8-210ENST00000412342 EDC3Q96F86 508 aaKnown RBP16.06■□□□□ 0.16
HDAC8-210ENST00000412342 HAUS7Q99871 368 aa16.06■□□□□ 0.16
HDAC8-210ENST00000412342 GBA2Q9HCG7 927 aaPredicted RBP16.06■□□□□ 0.16
HDAC8-210ENST00000412342 ECHDC1Q9NTX5 307 aa16.06■□□□□ 0.16
HDAC8-210ENST00000412342 TCP10L2B9ZVM9 353 aa16.05■□□□□ 0.16
HDAC8-210ENST00000412342 BTDP43251 543 aa16.05■□□□□ 0.16
HDAC8-210ENST00000412342 GSTO1P78417 241 aa16.05■□□□□ 0.16
HDAC8-210ENST00000412342 NFIAQ12857 509 aa16.05■□□□□ 0.16
HDAC8-210ENST00000412342 TNFAIP1Q13829 316 aa16.05■□□□□ 0.16
HDAC8-210ENST00000412342 FAM83AQ86UY5 434 aa16.05■□□□□ 0.16
HDAC8-210ENST00000412342 SLF2Q8IX21 1173 aa16.05■□□□□ 0.16
HDAC8-210ENST00000412342 KLRG1Q96E93 195 aa16.05■□□□□ 0.16
HDAC8-210ENST00000412342 BOLA2Q9H3K6 86 aa16.05■□□□□ 0.16
HDAC8-210ENST00000412342 WDHD1O75717 1129 aaPredicted RBP16.04■□□□□ 0.16
HDAC8-210ENST00000412342 NBPF12Q5TAG4 269 aaPredicted RBP16.04■□□□□ 0.16
HDAC8-210ENST00000412342 ANKRD45Q5TZF3 282 aa16.04■□□□□ 0.16
HDAC8-210ENST00000412342 TSHZ3Q63HK5 1081 aa16.04■□□□□ 0.16
HDAC8-210ENST00000412342 NAA16Q6N069 864 aaPredicted RBP16.04■□□□□ 0.16
HDAC8-210ENST00000412342 PI4K2BQ8TCG2 481 aa16.04■□□□□ 0.16
HDAC8-210ENST00000412342 HHIPL1Q96JK4 782 aa16.04■□□□□ 0.16
HDAC8-210ENST00000412342 DNAJC2Q99543 621 aaKnown RBP16.04■□□□□ 0.16
HDAC8-210ENST00000412342 IDI2Q9BXS1 227 aa16.04■□□□□ 0.16
HDAC8-210ENST00000412342 TMEM39BQ9GZU3 492 aa16.04■□□□□ 0.16
HDAC8-210ENST00000412342 USP40Q9NVE5 1235 aa16.04■□□□□ 0.16
HDAC8-210ENST00000412342 FAM198AQ9UFP1 575 aa16.04■□□□□ 0.16
HDAC8-210ENST00000412342 MKRN1Q9UHC7 482 aaKnown RBP16.04■□□□□ 0.16
HDAC8-210ENST00000412342 ABT1Q9ULW3 272 aaKnown RBP16.04■□□□□ 0.16
HDAC8-210ENST00000412342 TTC41PQ6P2S7 1318 aa16.03■□□□□ 0.16
HDAC8-210ENST00000412342 GOLIM4O00461 696 aa16.03■□□□□ 0.16
HDAC8-210ENST00000412342 IDH1O75874 414 aaKnown RBP16.03■□□□□ 0.16
HDAC8-210ENST00000412342 LDHCP07864 332 aa16.03■□□□□ 0.16
HDAC8-210ENST00000412342 FKBP1BP68106 108 aa16.03■□□□□ 0.16
HDAC8-210ENST00000412342 TTF1Q15361 905 aaPredicted RBP16.03■□□□□ 0.16
HDAC8-210ENST00000412342 MOB2Q70IA6 237 aa16.03■□□□□ 0.16
HDAC8-210ENST00000412342 PAG1Q9NWQ8 432 aa16.03■□□□□ 0.16
HDAC8-210ENST00000412342 TMOD2Q9NZR1 351 aa16.03■□□□□ 0.16
HDAC8-210ENST00000412342 TNNI2P48788 182 aa16.02■□□□□ 0.16
HDAC8-210ENST00000412342 PPP4CP60510 307 aa16.02■□□□□ 0.16
HDAC8-210ENST00000412342 DEFB115Q30KQ5 88 aa16.02■□□□□ 0.16
HDAC8-210ENST00000412342 MAGEB6Q8N7X4 407 aa16.02■□□□□ 0.16
HDAC8-210ENST00000412342 C2orf69Q8N8R5 385 aa16.02■□□□□ 0.16
HDAC8-210ENST00000412342 DDX4Q9NQI0 724 aaKnown RBP16.02■□□□□ 0.16
HDAC8-210ENST00000412342 FZD1Q9UP38 647 aa16.02■□□□□ 0.16
HDAC8-210ENST00000412342 SIPA1L1O43166 1804 aa16.02■□□□□ 0.16
HDAC8-210ENST00000412342 DDX60LQ5H9U9 1706 aaKnown RBP16.02■□□□□ 0.15
HDAC8-210ENST00000412342 ATRNL1Q5VV63 1379 aa16.01■□□□□ 0.15
HDAC8-210ENST00000412342 LAMB1P07942 1786 aa16.01■□□□□ 0.15
HDAC8-210ENST00000412342 TCRBV5S4A2TA0A5A2 114 aa16.01■□□□□ 0.15
HDAC8-210ENST00000412342 MAP4K4O95819 1239 aaPredicted RBP16.01■□□□□ 0.15
HDAC8-210ENST00000412342 MX1P20591 662 aa16.01■□□□□ 0.15
HDAC8-210ENST00000412342 RGS3P49796 1198 aa16.01■□□□□ 0.15
HDAC8-210ENST00000412342 HUNKP57058 714 aa16.01■□□□□ 0.15
HDAC8-210ENST00000412342 NUCB1Q02818 461 aa16.01■□□□□ 0.15
HDAC8-210ENST00000412342 MAP3K12Q12852 859 aa16.01■□□□□ 0.15
HDAC8-210ENST00000412342 MAP3K11Q16584 847 aa16.01■□□□□ 0.15
HDAC8-210ENST00000412342 TMED8Q6PL24 325 aaPredicted RBP16.01■□□□□ 0.15
HDAC8-210ENST00000412342 ZFPM1Q8IX07 1006 aa16.01■□□□□ 0.15
HDAC8-210ENST00000412342 JMYQ8N9B5 988 aa16.01■□□□□ 0.15
HDAC8-210ENST00000412342 FAM151AQ8WW52 585 aa16.01■□□□□ 0.15
HDAC8-210ENST00000412342 STAP2Q9UGK3 403 aa16.01■□□□□ 0.15
HDAC8-210ENST00000412342 COL2A1P02458 1487 aaPredicted RBP16■□□□□ 0.15
HDAC8-210ENST00000412342 ENTPD3O75355 529 aa16■□□□□ 0.15
HDAC8-210ENST00000412342 NPM3O75607 178 aaKnown RBP16■□□□□ 0.15
HDAC8-210ENST00000412342 PDE6AP16499 860 aa16■□□□□ 0.15
HDAC8-210ENST00000412342 CYP7A1P22680 504 aa16■□□□□ 0.15
HDAC8-210ENST00000412342 NF2P35240 595 aa16■□□□□ 0.15
HDAC8-210ENST00000412342 VEGFBP49765 207 aa16■□□□□ 0.15
HDAC8-210ENST00000412342 SUPT20HL1Q3ZLR7 823 aa16■□□□□ 0.15
HDAC8-210ENST00000412342 LDLRAD1Q5T700 205 aa16■□□□□ 0.15
HDAC8-210ENST00000412342 B4GALNT3Q6L9W6 998 aa16■□□□□ 0.15
HDAC8-210ENST00000412342 SH3BP5LQ7L8J4 393 aa16■□□□□ 0.15
HDAC8-210ENST00000412342 SH3RF3Q8TEJ3 882 aaPredicted RBP16■□□□□ 0.15
HDAC8-210ENST00000412342 GPATCH3Q96I76 525 aa16■□□□□ 0.15
HDAC8-210ENST00000412342 LNPKQ9C0E8 428 aa16■□□□□ 0.15
HDAC8-210ENST00000412342 AATFQ9NY61 560 aaKnown RBP eCLIP16■□□□□ 0.15
HDAC8-210ENST00000412342 CHGBP05060 677 aa15.99■□□□□ 0.15
HDAC8-210ENST00000412342 DYNLL1P63167 89 aaKnown RBP15.99■□□□□ 0.15
HDAC8-210ENST00000412342 TCP10Q12799 353 aa15.99■□□□□ 0.15
HDAC8-210ENST00000412342 CYP4F22Q6NT55 531 aa15.99■□□□□ 0.15
HDAC8-210ENST00000412342 CHD1LQ86WJ1 897 aa15.99■□□□□ 0.15
HDAC8-210ENST00000412342 RIOK1Q9BRS2 568 aaKnown RBP15.99■□□□□ 0.15
HDAC8-210ENST00000412342 AK9Q5TCS8 1911 aa15.99■□□□□ 0.15
HDAC8-210ENST00000412342 WDR33Q9C0J8 1336 aaKnown RBP15.98■□□□□ 0.15
HDAC8-210ENST00000412342 ZNF532Q9HCE3 1301 aa15.98■□□□□ 0.15
HDAC8-210ENST00000412342 FAM155AB1AL88 458 aaPredicted RBP15.98■□□□□ 0.15
HDAC8-210ENST00000412342 UBE2Q2LH0YL09 131 aa15.98■□□□□ 0.15
HDAC8-210ENST00000412342 USP2O75604 605 aaPredicted RBP15.98■□□□□ 0.15
HDAC8-210ENST00000412342 GLRX3O76003 335 aaKnown RBP15.98■□□□□ 0.15
HDAC8-210ENST00000412342 ADD2P35612 726 aa15.98■□□□□ 0.15
HDAC8-210ENST00000412342 PDE1AP54750 535 aa15.98■□□□□ 0.15
HDAC8-210ENST00000412342 PRKG1Q13976 671 aa15.98■□□□□ 0.15
HDAC8-210ENST00000412342 SLFNL1Q499Z3 407 aa15.98■□□□□ 0.15
HDAC8-210ENST00000412342 SLC9C2Q5TAH2 1124 aa15.98■□□□□ 0.15
HDAC8-210ENST00000412342 RGMBQ6NW40 437 aa15.98■□□□□ 0.15
HDAC8-210ENST00000412342 CAPNS2Q96L46 248 aa15.98■□□□□ 0.15
HDAC8-210ENST00000412342 ANGEL1Q9UNK9 670 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms