RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 CCL15Q16663 113 aa20.57■□□□□ 0.88
SCAMP4-203ENST00000411971 FKBP1CQ5VVH2 108 aa20.57■□□□□ 0.88
SCAMP4-203ENST00000411971 WRNIP1Q96S55 665 aa20.57■□□□□ 0.88
SCAMP4-203ENST00000411971 FAM198AQ9UFP1 575 aa20.57■□□□□ 0.88
SCAMP4-203ENST00000411971 FBXO3Q9UK99 471 aa20.57■□□□□ 0.88
SCAMP4-203ENST00000411971 MAST3O60307 1309 aa20.56■□□□□ 0.88
SCAMP4-203ENST00000411971 DOCK2Q92608 1830 aa20.56■□□□□ 0.88
SCAMP4-203ENST00000411971 SLURP2P0DP57 97 aa20.56■□□□□ 0.88
SCAMP4-203ENST00000411971 TIMM10P62072 90 aa20.56■□□□□ 0.88
SCAMP4-203ENST00000411971 TCP10Q12799 353 aa20.56■□□□□ 0.88
SCAMP4-203ENST00000411971 CCDC102BQ68D86 513 aa20.56■□□□□ 0.88
SCAMP4-203ENST00000411971 RPAP1Q9BWH6 1393 aaPredicted RBP20.56■□□□□ 0.88
SCAMP4-203ENST00000411971 IRF6O14896 467 aa20.55■□□□□ 0.88
SCAMP4-203ENST00000411971 TRIM27P14373 513 aa20.55■□□□□ 0.88
SCAMP4-203ENST00000411971 IL15P40933 162 aaPredicted RBP20.55■□□□□ 0.88
SCAMP4-203ENST00000411971 RBBP6Q7Z6E9 1792 aaKnown RBP20.54■□□□□ 0.88
SCAMP4-203ENST00000411971 KIAA0100Q14667 2235 aaKnown RBP20.54■□□□□ 0.88
SCAMP4-203ENST00000411971 TFCP2Q12800 502 aa20.54■□□□□ 0.88
SCAMP4-203ENST00000411971 RASGRF1Q13972 1273 aa20.54■□□□□ 0.88
SCAMP4-203ENST00000411971 ZNF384Q8TF68 577 aa20.54■□□□□ 0.88
SCAMP4-203ENST00000411971 FAM151AQ8WW52 585 aa20.54■□□□□ 0.88
SCAMP4-203ENST00000411971 ARHGAP45Q92619 1136 aa20.54■□□□□ 0.88
SCAMP4-203ENST00000411971 TMOD2Q9NZR1 351 aa20.54■□□□□ 0.88
SCAMP4-203ENST00000411971 CSADQ9Y600 493 aa20.54■□□□□ 0.88
SCAMP4-203ENST00000411971 SALL1Q9NSC2 1324 aa20.53■□□□□ 0.88
SCAMP4-203ENST00000411971 POTEFA5A3E0 1075 aa20.53■□□□□ 0.88
SCAMP4-203ENST00000411971 LDHBP07195 334 aaKnown RBP20.53■□□□□ 0.88
SCAMP4-203ENST00000411971 SP3Q02447 781 aa20.53■□□□□ 0.88
SCAMP4-203ENST00000411971 MTX1Q13505 466 aa20.53■□□□□ 0.88
SCAMP4-203ENST00000411971 PTPN22Q9Y2R2 807 aa20.53■□□□□ 0.88
SCAMP4-203ENST00000411971 ATRNL1Q5VV63 1379 aa20.53■□□□□ 0.88
SCAMP4-203ENST00000411971 RFX7Q2KHR2 1363 aa20.52■□□□□ 0.88
SCAMP4-203ENST00000411971 PNMA6EA0A0J9YXQ4 647 aa20.52■□□□□ 0.88
SCAMP4-203ENST00000411971 BTBD19C9JJ37 291 aa20.52■□□□□ 0.88
SCAMP4-203ENST00000411971 SRGAP3O43295 1099 aa20.52■□□□□ 0.88
SCAMP4-203ENST00000411971 GTF2A2P52657 109 aa20.52■□□□□ 0.88
SCAMP4-203ENST00000411971 TAF1CQ15572 869 aaPredicted RBP20.52■□□□□ 0.88
SCAMP4-203ENST00000411971 ERO1BQ86YB8 467 aa20.52■□□□□ 0.88
SCAMP4-203ENST00000411971 CLUAP1Q96AJ1 413 aa20.52■□□□□ 0.88
SCAMP4-203ENST00000411971 ZNF112Q9UJU3 913 aa20.52■□□□□ 0.88
SCAMP4-203ENST00000411971 MYO5AQ9Y4I1 1855 aaKnown RBP20.52■□□□□ 0.87
SCAMP4-203ENST00000411971 PHIPQ8WWQ0 1821 aa20.51■□□□□ 0.87
SCAMP4-203ENST00000411971 A0A1B0GUL7 405 aa20.51■□□□□ 0.87
SCAMP4-203ENST00000411971 OTUD7BQ6GQQ9 843 aa20.51■□□□□ 0.87
SCAMP4-203ENST00000411971 PI16Q6UXB8 463 aa20.51■□□□□ 0.87
SCAMP4-203ENST00000411971 SH3BP5LQ7L8J4 393 aa20.51■□□□□ 0.87
SCAMP4-203ENST00000411971 XAGE2Q96GT9 111 aa20.51■□□□□ 0.87
SCAMP4-203ENST00000411971 ERO1AQ96HE7 468 aa20.51■□□□□ 0.87
SCAMP4-203ENST00000411971 ARHGAP39Q9C0H5 1083 aa20.51■□□□□ 0.87
SCAMP4-203ENST00000411971 USP40Q9NVE5 1235 aa20.51■□□□□ 0.87
SCAMP4-203ENST00000411971 DENND2AQ9ULE3 1009 aa20.51■□□□□ 0.87
SCAMP4-203ENST00000411971 PTPRFP10586 1907 aa20.51■□□□□ 0.87
SCAMP4-203ENST00000411971 MOGSQ13724 837 aa20.5■□□□□ 0.87
SCAMP4-203ENST00000411971 ZNF341Q9BYN7 854 aa20.5■□□□□ 0.87
SCAMP4-203ENST00000411971 EFCC1Q9HA90 598 aa20.5■□□□□ 0.87
SCAMP4-203ENST00000411971 DDX4Q9NQI0 724 aaKnown RBP20.5■□□□□ 0.87
SCAMP4-203ENST00000411971 GAKO14976 1311 aa20.5■□□□□ 0.87
SCAMP4-203ENST00000411971 SEMA3EO15041 775 aa20.49■□□□□ 0.87
SCAMP4-203ENST00000411971 ZBTB22O15209 634 aa20.49■□□□□ 0.87
SCAMP4-203ENST00000411971 SLC34A2O95436 690 aa20.49■□□□□ 0.87
SCAMP4-203ENST00000411971 PPIL2Q13356 520 aa20.49■□□□□ 0.87
SCAMP4-203ENST00000411971 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.49■□□□□ 0.87
SCAMP4-203ENST00000411971 FRAT1Q92837 279 aaPredicted RBP20.49■□□□□ 0.87
SCAMP4-203ENST00000411971 GNL3LQ9NVN8 582 aaKnown RBP20.49■□□□□ 0.87
SCAMP4-203ENST00000411971 GNAI3P08754 354 aa20.48■□□□□ 0.87
SCAMP4-203ENST00000411971 CTGFP29279 349 aa20.48■□□□□ 0.87
SCAMP4-203ENST00000411971 RGS3P49796 1198 aa20.48■□□□□ 0.87
SCAMP4-203ENST00000411971 DCAF15Q66K64 600 aa20.48■□□□□ 0.87
SCAMP4-203ENST00000411971 ATF7IPQ6VMQ6 1270 aa20.48■□□□□ 0.87
SCAMP4-203ENST00000411971 ZFYVE28Q9HCC9 887 aa20.48■□□□□ 0.87
SCAMP4-203ENST00000411971 DDTLA6NHG4 134 aaPredicted RBP20.47■□□□□ 0.87
SCAMP4-203ENST00000411971 PHF20L1A8MW92 1017 aa20.47■□□□□ 0.87
SCAMP4-203ENST00000411971 WDHD1O75717 1129 aaPredicted RBP20.47■□□□□ 0.87
SCAMP4-203ENST00000411971 ECM2O94769 699 aaPredicted RBP20.47■□□□□ 0.87
SCAMP4-203ENST00000411971 CETPP11597 493 aa20.47■□□□□ 0.87
SCAMP4-203ENST00000411971 TMEM57Q8N5G2 664 aa20.47■□□□□ 0.87
SCAMP4-203ENST00000411971 ABCF2Q9UG63 623 aa20.47■□□□□ 0.87
SCAMP4-203ENST00000411971 PTCH2Q9Y6C5 1203 aa20.47■□□□□ 0.87
SCAMP4-203ENST00000411971 DOCK1Q14185 1865 aa20.46■□□□□ 0.87
SCAMP4-203ENST00000411971 PPATQ06203 517 aa20.46■□□□□ 0.87
SCAMP4-203ENST00000411971 SNAPC2Q13487 334 aa20.46■□□□□ 0.87
SCAMP4-203ENST00000411971 TBC1D9Q6ZT07 1266 aa20.46■□□□□ 0.87
SCAMP4-203ENST00000411971 MIER1Q8N108 512 aa20.46■□□□□ 0.87
SCAMP4-203ENST00000411971 ARMC5Q96C12 935 aa20.46■□□□□ 0.87
SCAMP4-203ENST00000411971 IDI2Q9BXS1 227 aa20.46■□□□□ 0.87
SCAMP4-203ENST00000411971 HMG20BQ9P0W2 317 aa20.46■□□□□ 0.87
SCAMP4-203ENST00000411971 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.46■□□□□ 0.87
SCAMP4-203ENST00000411971 CDK5RAP2Q96SN8 1893 aa20.45■□□□□ 0.86
SCAMP4-203ENST00000411971 TLR2O60603 784 aa20.45■□□□□ 0.86
SCAMP4-203ENST00000411971 RHBDL3P58872 404 aa20.45■□□□□ 0.86
SCAMP4-203ENST00000411971 MECOMQ03112 1051 aa20.45■□□□□ 0.86
SCAMP4-203ENST00000411971 NOL9Q5SY16 702 aaKnown RBP20.45■□□□□ 0.86
SCAMP4-203ENST00000411971 KCNH4Q9UQ05 1017 aa20.45■□□□□ 0.86
SCAMP4-203ENST00000411971 SIPA1L1O43166 1804 aa20.45■□□□□ 0.86
SCAMP4-203ENST00000411971 PDS5AQ29RF7 1337 aaKnown RBP20.45■□□□□ 0.86
SCAMP4-203ENST00000411971 ADGRA2Q96PE1 1338 aa20.45■□□□□ 0.86
SCAMP4-203ENST00000411971 MGAMO43451 1857 aa20.44■□□□□ 0.86
SCAMP4-203ENST00000411971 GNAI2P04899 355 aa20.44■□□□□ 0.86
SCAMP4-203ENST00000411971 HOOK2Q96ED9 719 aa20.44■□□□□ 0.86
SCAMP4-203ENST00000411971 NEUROD6Q96NK8 337 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms