RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 ZNF865P0CJ78 1059 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P2-201ENST00000411913 CD96P40200 585 aa5.29□□□□□ -1.56
HMGB3P2-201ENST00000411913 USP5P45974 858 aa5.29□□□□□ -1.56
HMGB3P2-201ENST00000411913 PRKCQQ04759 706 aa5.29□□□□□ -1.56
HMGB3P2-201ENST00000411913 CCER1Q8TC90 406 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P2-201ENST00000411913 TOX2Q96NM4 488 aa5.29□□□□□ -1.56
HMGB3P2-201ENST00000411913 GSX1Q9H4S2 264 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P2-201ENST00000411913 PIDD1Q9HB75 910 aa5.29□□□□□ -1.56
HMGB3P2-201ENST00000411913 AOC2O75106 756 aa5.28□□□□□ -1.56
HMGB3P2-201ENST00000411913 RAP1GAPP47736 663 aa5.28□□□□□ -1.56
HMGB3P2-201ENST00000411913 MESP2Q0VG99 397 aa5.28□□□□□ -1.56
HMGB3P2-201ENST00000411913 CDK5R2Q13319 367 aa5.28□□□□□ -1.56
HMGB3P2-201ENST00000411913 AOC3Q16853 763 aa5.28□□□□□ -1.56
HMGB3P2-201ENST00000411913 SPRED3Q2MJR0 410 aa5.28□□□□□ -1.56
HMGB3P2-201ENST00000411913 HRASLS5Q96KN8 279 aa5.28□□□□□ -1.56
HMGB3P2-201ENST00000411913 LIN7BQ9HAP6 207 aa5.28□□□□□ -1.56
HMGB3P2-201ENST00000411913 FAM53CQ9NYF3 392 aa5.28□□□□□ -1.56
HMGB3P2-201ENST00000411913 ECEL1O95672 775 aa5.27□□□□□ -1.57
HMGB3P2-201ENST00000411913 GRIA4P48058 902 aa5.27□□□□□ -1.57
HMGB3P2-201ENST00000411913 SRPK2P78362 688 aaKnown RBP5.27□□□□□ -1.57
HMGB3P2-201ENST00000411913 MLANAQ16655 118 aa5.27□□□□□ -1.57
HMGB3P2-201ENST00000411913 IFI16Q16666 785 aaKnown RBP5.27□□□□□ -1.57
HMGB3P2-201ENST00000411913 ANGEL2Q5VTE6 544 aaKnown RBP5.27□□□□□ -1.57
HMGB3P2-201ENST00000411913 CCNJLQ8IV13 435 aa5.27□□□□□ -1.57
HMGB3P2-201ENST00000411913 BHLHE22Q8NFJ8 381 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P2-201ENST00000411913 ZSCAN18Q8TBC5 510 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P2-201ENST00000411913 GTF3C2Q8WUA4 911 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P2-201ENST00000411913 ZFYVE28Q9HCC9 887 aa5.27□□□□□ -1.57
HMGB3P2-201ENST00000411913 SLAIN2Q9P270 581 aa5.27□□□□□ -1.57
HMGB3P2-201ENST00000411913 PPP1R9AQ9ULJ8 1098 aa5.27□□□□□ -1.57
HMGB3P2-201ENST00000411913 KCNMB1Q16558 191 aa5.26□□□□□ -1.57
HMGB3P2-201ENST00000411913 ZSWIM9Q86XI8 627 aa5.26□□□□□ -1.57
HMGB3P2-201ENST00000411913 TRIM56Q9BRZ2 755 aaKnown RBP5.26□□□□□ -1.57
HMGB3P2-201ENST00000411913 WDR18Q9BV38 432 aa5.26□□□□□ -1.57
HMGB3P2-201ENST00000411913 TMEM265A0A087WTH1 108 aa5.25□□□□□ -1.57
HMGB3P2-201ENST00000411913 A0A1W2PP55 124 aa5.25□□□□□ -1.57
HMGB3P2-201ENST00000411913 KRTAP9-7A8MTY7 169 aa5.25□□□□□ -1.57
HMGB3P2-201ENST00000411913 MTMR3Q13615 1198 aa5.25□□□□□ -1.57
HMGB3P2-201ENST00000411913 LILRA6Q6PI73 481 aa5.25□□□□□ -1.57
HMGB3P2-201ENST00000411913 SLC23A3Q6PIS1 610 aa5.25□□□□□ -1.57
HMGB3P2-201ENST00000411913 KRTAP4-5Q9BYR2 181 aa5.25□□□□□ -1.57
HMGB3P2-201ENST00000411913 RNGTTO60942 597 aaKnown RBP5.24□□□□□ -1.57
HMGB3P2-201ENST00000411913 FAM13AO94988 1023 aa5.24□□□□□ -1.57
HMGB3P2-201ENST00000411913 B3GALT4O96024 378 aa5.24□□□□□ -1.57
HMGB3P2-201ENST00000411913 SLFN14P0C7P3 912 aa5.24□□□□□ -1.57
HMGB3P2-201ENST00000411913 LIG1P18858 919 aa5.24□□□□□ -1.57
HMGB3P2-201ENST00000411913 CFPP27918 469 aa5.24□□□□□ -1.57
HMGB3P2-201ENST00000411913 AP3B2Q13367 1082 aa5.24□□□□□ -1.57
HMGB3P2-201ENST00000411913 LRRC56Q8IYG6 542 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P2-201ENST00000411913 SMYD4Q8IYR2 804 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P2-201ENST00000411913 FLAD1Q8NFF5 587 aa5.24□□□□□ -1.57
HMGB3P2-201ENST00000411913 PPP1R16BQ96T49 567 aa5.24□□□□□ -1.57
HMGB3P2-201ENST00000411913 TCF12Q99081 682 aa5.24□□□□□ -1.57
HMGB3P2-201ENST00000411913 ATXN3LQ9H3M9 355 aa5.24□□□□□ -1.57
HMGB3P2-201ENST00000411913 MKNK2Q9HBH9 465 aa5.24□□□□□ -1.57
HMGB3P2-201ENST00000411913 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.24□□□□□ -1.57
HMGB3P2-201ENST00000411913 SYNGAP1Q96PV0 1343 aa5.23□□□□□ -1.57
HMGB3P2-201ENST00000411913 TMPRSS2O15393 492 aa5.23□□□□□ -1.57
HMGB3P2-201ENST00000411913 CEACAM5P06731 702 aa5.23□□□□□ -1.57
HMGB3P2-201ENST00000411913 ITIH2P19823 946 aa5.23□□□□□ -1.57
HMGB3P2-201ENST00000411913 ANKLE2Q86XL3 938 aa5.23□□□□□ -1.57
HMGB3P2-201ENST00000411913 GALNT12Q8IXK2 581 aa5.23□□□□□ -1.57
HMGB3P2-201ENST00000411913 PRDM7Q9NQW5 492 aa5.23□□□□□ -1.57
HMGB3P2-201ENST00000411913 CRIM1Q9NZV1 1036 aa5.23□□□□□ -1.57
HMGB3P2-201ENST00000411913 ZNF503-AS2A6NEH8 195 aa5.22□□□□□ -1.57
HMGB3P2-201ENST00000411913 PRRG2O14669 202 aa5.22□□□□□ -1.57
HMGB3P2-201ENST00000411913 LEFTY1O75610 366 aa5.22□□□□□ -1.57
HMGB3P2-201ENST00000411913 ZSCAN22P10073 491 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P2-201ENST00000411913 OXCT1P55809 520 aa5.22□□□□□ -1.57
HMGB3P2-201ENST00000411913 HNRNPUQ00839 825 aaKnown RBP eCLIP5.22□□□□□ -1.57
HMGB3P2-201ENST00000411913 ID3Q02535 119 aa5.22□□□□□ -1.57
HMGB3P2-201ENST00000411913 PBXIP1Q96AQ6 731 aa5.22□□□□□ -1.57
HMGB3P2-201ENST00000411913 LIN37Q96GY3 246 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P2-201ENST00000411913 FANCD2OSQ96PS1 177 aa5.22□□□□□ -1.57
HMGB3P2-201ENST00000411913 DUSP23Q9BVJ7 150 aa5.22□□□□□ -1.57
HMGB3P2-201ENST00000411913 ZC3H12CQ9C0D7 883 aaKnown RBP5.22□□□□□ -1.57
HMGB3P2-201ENST00000411913 ZNF576Q9H609 170 aa5.22□□□□□ -1.57
HMGB3P2-201ENST00000411913 SSU72Q9NP77 194 aaKnown RBP5.22□□□□□ -1.57
HMGB3P2-201ENST00000411913 U3KQE9 123 aa5.22□□□□□ -1.57
HMGB3P2-201ENST00000411913 B8ZZF3 427 aa5.21□□□□□ -1.58
HMGB3P2-201ENST00000411913 TSPAN15O95858 294 aa5.21□□□□□ -1.58
HMGB3P2-201ENST00000411913 IKZF1Q13422 519 aa5.21□□□□□ -1.58
HMGB3P2-201ENST00000411913 MPZL3Q6UWV2 235 aa5.21□□□□□ -1.58
HMGB3P2-201ENST00000411913 SYDE1Q6ZW31 735 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P2-201ENST00000411913 CILP2Q8IUL8 1156 aa5.21□□□□□ -1.58
HMGB3P2-201ENST00000411913 SIAH1Q8IUQ4 282 aa5.21□□□□□ -1.58
HMGB3P2-201ENST00000411913 WDR89Q96FK6 387 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P2-201ENST00000411913 EHD4Q9H223 541 aa5.21□□□□□ -1.58
HMGB3P2-201ENST00000411913 CCDC86Q9H6F5 360 aaKnown RBP5.21□□□□□ -1.58
HMGB3P2-201ENST00000411913 PCOLCE2Q9UKZ9 415 aa5.21□□□□□ -1.58
HMGB3P2-201ENST00000411913 PLAGL2Q9UPG8 496 aa5.21□□□□□ -1.58
HMGB3P2-201ENST00000411913 NCANO14594 1321 aa5.21□□□□□ -1.58
HMGB3P2-201ENST00000411913 FZD6O60353 706 aa5.2□□□□□ -1.58
HMGB3P2-201ENST00000411913 HCLS1P14317 486 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P2-201ENST00000411913 NPR3P17342 541 aa5.2□□□□□ -1.58
HMGB3P2-201ENST00000411913 AFMP43652 599 aa5.2□□□□□ -1.58
HMGB3P2-201ENST00000411913 ZP2Q05996 745 aa5.2□□□□□ -1.58
HMGB3P2-201ENST00000411913 TTLL4Q14679 1199 aa5.2□□□□□ -1.58
HMGB3P2-201ENST00000411913 LCE5AQ5TCM9 118 aa5.2□□□□□ -1.58
HMGB3P2-201ENST00000411913 LCNL1Q6ZST4 164 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms