RNA–Protein interactions for RNA: ENST00000411844.1

CLUHP3-202, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 2

Gene CLUHP3, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-202ENST00000411844 Q6ZUG5 572 aa13.77□□□□□ -0.21
CLUHP3-202ENST00000411844 RTKN2Q8IZC4 609 aa13.77□□□□□ -0.21
CLUHP3-202ENST00000411844 STAG1Q8WVM7 1258 aa13.77□□□□□ -0.21
CLUHP3-202ENST00000411844 KRT23Q9C075 422 aa13.77□□□□□ -0.21
CLUHP3-202ENST00000411844 TPCN1Q9ULQ1 816 aa13.77□□□□□ -0.21
CLUHP3-202ENST00000411844 CCDC88AQ3V6T2 1871 aa13.76□□□□□ -0.21
CLUHP3-202ENST00000411844 GAKO14976 1311 aa13.76□□□□□ -0.21
CLUHP3-202ENST00000411844 G3V3G9 751 aa13.76□□□□□ -0.21
CLUHP3-202ENST00000411844 HAND2P61296 217 aa13.76□□□□□ -0.21
CLUHP3-202ENST00000411844 FGD1P98174 961 aa13.76□□□□□ -0.21
CLUHP3-202ENST00000411844 ME3Q16798 604 aa13.76□□□□□ -0.21
CLUHP3-202ENST00000411844 SBK1Q52WX2 424 aa13.76□□□□□ -0.21
CLUHP3-202ENST00000411844 CCDC93Q567U6 631 aa13.76□□□□□ -0.21
CLUHP3-202ENST00000411844 MFSD14BQ5SR56 506 aa13.76□□□□□ -0.21
CLUHP3-202ENST00000411844 AKNAD1Q5T1N1 836 aa13.76□□□□□ -0.21
CLUHP3-202ENST00000411844 DCAF8Q5TAQ9 597 aa13.76□□□□□ -0.21
CLUHP3-202ENST00000411844 CLEC17AQ6ZS10 378 aa13.76□□□□□ -0.21
CLUHP3-202ENST00000411844 NOL8Q76FK4 1167 aaKnown RBP13.76□□□□□ -0.21
CLUHP3-202ENST00000411844 UPF1Q92900 1129 aaKnown RBP eCLIP13.76□□□□□ -0.21
CLUHP3-202ENST00000411844 ZNF274Q96GC6 653 aaPredicted RBP13.76□□□□□ -0.21
CLUHP3-202ENST00000411844 TMEM87BQ96K49 555 aa13.76□□□□□ -0.21
CLUHP3-202ENST00000411844 PSMD1Q99460 953 aa13.76□□□□□ -0.21
CLUHP3-202ENST00000411844 NBPF3Q9H094 633 aa13.76□□□□□ -0.21
CLUHP3-202ENST00000411844 ARPP21Q9UBL0 812 aaPredicted RBP13.76□□□□□ -0.21
CLUHP3-202ENST00000411844 GPR75-ASB3A0A0A6YYF3 556 aa13.75□□□□□ -0.21
CLUHP3-202ENST00000411844 A0A0G2JLW4 131 aa13.75□□□□□ -0.21
CLUHP3-202ENST00000411844 PRKAB2O43741 272 aa13.75□□□□□ -0.21
CLUHP3-202ENST00000411844 DYNLL1P63167 89 aaKnown RBP13.75□□□□□ -0.21
CLUHP3-202ENST00000411844 PPARAQ07869 468 aa13.75□□□□□ -0.21
CLUHP3-202ENST00000411844 KIAA2012Q0VF49 1180 aa13.75□□□□□ -0.21
CLUHP3-202ENST00000411844 TBC1D10CQ8IV04 446 aa13.75□□□□□ -0.21
CLUHP3-202ENST00000411844 ANP32EQ9BTT0 268 aa13.75□□□□□ -0.21
CLUHP3-202ENST00000411844 MRIQ9BWK5 157 aa13.75□□□□□ -0.21
CLUHP3-202ENST00000411844 FOXD4L1Q9NU39 408 aa13.75□□□□□ -0.21
CLUHP3-202ENST00000411844 SLX4Q8IY92 1834 aa13.74□□□□□ -0.21
CLUHP3-202ENST00000411844 RIMBP2O15034 1052 aa13.74□□□□□ -0.21
CLUHP3-202ENST00000411844 PRC1O43663 620 aa13.74□□□□□ -0.21
CLUHP3-202ENST00000411844 PFKFB2O60825 505 aa13.74□□□□□ -0.21
CLUHP3-202ENST00000411844 FGRP09769 529 aa13.74□□□□□ -0.21
CLUHP3-202ENST00000411844 KCNA3P22001 575 aa13.74□□□□□ -0.21
CLUHP3-202ENST00000411844 GTF2IP78347 998 aa13.74□□□□□ -0.21
CLUHP3-202ENST00000411844 NFKBIBQ15653 356 aa13.74□□□□□ -0.21
CLUHP3-202ENST00000411844 STRIP1Q5VSL9 837 aa13.74□□□□□ -0.21
CLUHP3-202ENST00000411844 MFSD6Q6ZSS7 791 aa13.74□□□□□ -0.21
CLUHP3-202ENST00000411844 BRF1Q92994 677 aa13.74□□□□□ -0.21
CLUHP3-202ENST00000411844 LLPHQ9BRT6 129 aaKnown RBP13.74□□□□□ -0.21
CLUHP3-202ENST00000411844 AATFQ9NY61 560 aaKnown RBP eCLIP13.74□□□□□ -0.21
CLUHP3-202ENST00000411844 SMC3Q9UQE7 1217 aa13.74□□□□□ -0.21
CLUHP3-202ENST00000411844 LARGE1O95461 756 aa13.73□□□□□ -0.21
CLUHP3-202ENST00000411844 SLC3A2P08195 630 aaKnown RBP13.73□□□□□ -0.21
CLUHP3-202ENST00000411844 DPEP1P16444 411 aa13.73□□□□□ -0.21
CLUHP3-202ENST00000411844 PTMSP20962 102 aa13.73□□□□□ -0.21
CLUHP3-202ENST00000411844 HDLBPQ00341 1268 aaKnown RBP13.73□□□□□ -0.21
CLUHP3-202ENST00000411844 COL9A3Q14050 684 aaPredicted RBP13.73□□□□□ -0.21
CLUHP3-202ENST00000411844 OLFM4Q6UX06 510 aa13.73□□□□□ -0.21
CLUHP3-202ENST00000411844 SDR42E1Q8WUS8 393 aa13.73□□□□□ -0.21
CLUHP3-202ENST00000411844 GTF3C6Q969F1 213 aa13.73□□□□□ -0.21
CLUHP3-202ENST00000411844 TCEANC2Q96MN5 208 aa13.73□□□□□ -0.21
CLUHP3-202ENST00000411844 GBP4Q96PP9 640 aa13.73□□□□□ -0.21
CLUHP3-202ENST00000411844 DCP1AQ9NPI6 582 aaPredicted RBP13.73□□□□□ -0.21
CLUHP3-202ENST00000411844 CD2APQ9Y5K6 639 aa13.73□□□□□ -0.21
CLUHP3-202ENST00000411844 ZBTB7AO95365 584 aa13.72□□□□□ -0.21
CLUHP3-202ENST00000411844 PDCP20941 246 aa13.72□□□□□ -0.21
CLUHP3-202ENST00000411844 LIFRP42702 1097 aa13.72□□□□□ -0.21
CLUHP3-202ENST00000411844 ANTXR2P58335 489 aa13.72□□□□□ -0.21
CLUHP3-202ENST00000411844 CTR9Q6PD62 1173 aa13.72□□□□□ -0.21
CLUHP3-202ENST00000411844 HHIPL2Q6UWX4 724 aa13.72□□□□□ -0.21
CLUHP3-202ENST00000411844 CCDC83Q8IWF9 413 aa13.72□□□□□ -0.21
CLUHP3-202ENST00000411844 AMOTL1Q8IY63 956 aa13.72□□□□□ -0.21
CLUHP3-202ENST00000411844 TMTC2Q8N394 836 aa13.72□□□□□ -0.21
CLUHP3-202ENST00000411844 PIM2Q9P1W9 311 aa13.72□□□□□ -0.21
CLUHP3-202ENST00000411844 MKRN1Q9UHC7 482 aaKnown RBP13.72□□□□□ -0.21
CLUHP3-202ENST00000411844 ANGEL1Q9UNK9 670 aaKnown RBP13.72□□□□□ -0.21
CLUHP3-202ENST00000411844 JAG2Q9Y219 1238 aa13.72□□□□□ -0.21
CLUHP3-202ENST00000411844 WDR33Q9C0J8 1336 aaKnown RBP13.71□□□□□ -0.21
CLUHP3-202ENST00000411844 C21orf2O43822 256 aa13.71□□□□□ -0.21
CLUHP3-202ENST00000411844 ORC4O43929 436 aa13.71□□□□□ -0.21
CLUHP3-202ENST00000411844 DHX16O60231 1041 aaKnown RBP13.71□□□□□ -0.21
CLUHP3-202ENST00000411844 ECE2O60344 883 aa13.71□□□□□ -0.21
CLUHP3-202ENST00000411844 BRD1O95696 1058 aa13.71□□□□□ -0.21
CLUHP3-202ENST00000411844 BTDP43251 543 aa13.71□□□□□ -0.21
CLUHP3-202ENST00000411844 RCAN1P53805 252 aa13.71□□□□□ -0.21
CLUHP3-202ENST00000411844 ST3GAL1Q11201 340 aa13.71□□□□□ -0.21
CLUHP3-202ENST00000411844 SART3Q15020 963 aaKnown RBP13.71□□□□□ -0.21
CLUHP3-202ENST00000411844 DIXDC1Q155Q3 683 aa13.71□□□□□ -0.21
CLUHP3-202ENST00000411844 GRIK5Q16478 980 aa13.71□□□□□ -0.21
CLUHP3-202ENST00000411844 DOK7Q18PE1 504 aa13.71□□□□□ -0.21
CLUHP3-202ENST00000411844 SGMS1Q86VZ5 419 aa13.71□□□□□ -0.21
CLUHP3-202ENST00000411844 ESR2Q92731 530 aa13.71□□□□□ -0.21
CLUHP3-202ENST00000411844 TNPO1Q92973 898 aaKnown RBP13.71□□□□□ -0.21
CLUHP3-202ENST00000411844 SGIP1Q9BQI5 828 aa13.71□□□□□ -0.21
CLUHP3-202ENST00000411844 KIF3AQ9Y496 699 aa13.71□□□□□ -0.21
CLUHP3-202ENST00000411844 ROBO3Q96MS0 1386 aa13.71□□□□□ -0.22
CLUHP3-202ENST00000411844 NEDD4P46934 1319 aa13.7□□□□□ -0.22
CLUHP3-202ENST00000411844 USP17L3A6NCW0 530 aa13.7□□□□□ -0.22
CLUHP3-202ENST00000411844 USP17L4A6NCW7 530 aa13.7□□□□□ -0.22
CLUHP3-202ENST00000411844 DDX11L8A8MPP1 907 aa13.7□□□□□ -0.22
CLUHP3-202ENST00000411844 B4E1Z4 1266 aa13.7□□□□□ -0.22
CLUHP3-202ENST00000411844 USP17L12C9JPN9 530 aa13.7□□□□□ -0.22
CLUHP3-202ENST00000411844 USP17L21D6R901 530 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms