RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 MBD4O95243 580 aa22.36■■□□□ 1.17
CDC42-204ENST00000411827 CFAP100Q494V2 611 aa22.36■■□□□ 1.17
CDC42-204ENST00000411827 MICALL2Q8IY33 904 aa22.36■■□□□ 1.17
CDC42-204ENST00000411827 NACAP1Q9BZK3 213 aa22.36■■□□□ 1.17
CDC42-204ENST00000411827 MYOZ2Q9NPC6 264 aa22.36■■□□□ 1.17
CDC42-204ENST00000411827 SPDYE2BA6NHP3 402 aa22.35■■□□□ 1.17
CDC42-204ENST00000411827 NPM3O75607 178 aaKnown RBP22.35■■□□□ 1.17
CDC42-204ENST00000411827 DDNO94850 711 aaPredicted RBP22.35■■□□□ 1.17
CDC42-204ENST00000411827 SPDYE6P0CI01 402 aa22.35■■□□□ 1.17
CDC42-204ENST00000411827 BTDP43251 543 aa22.35■■□□□ 1.17
CDC42-204ENST00000411827 FKBP1CQ5VVH2 108 aa22.35■■□□□ 1.17
CDC42-204ENST00000411827 APOBEC3HQ6NTF7 200 aaKnown RBP22.35■■□□□ 1.17
CDC42-204ENST00000411827 DSCC1Q9BVC3 393 aa22.35■■□□□ 1.17
CDC42-204ENST00000411827 UPF2Q9HAU5 1272 aaKnown RBP22.35■■□□□ 1.17
CDC42-204ENST00000411827 ATP8A2Q9NTI2 1148 aa22.35■■□□□ 1.17
CDC42-204ENST00000411827 TMOD2Q9NZR1 351 aa22.35■■□□□ 1.17
CDC42-204ENST00000411827 MYO5AQ9Y4I1 1855 aaKnown RBP22.34■■□□□ 1.17
CDC42-204ENST00000411827 MYH2Q9UKX2 1941 aa22.34■■□□□ 1.17
CDC42-204ENST00000411827 ADGRA1Q86SQ6 560 aa22.34■■□□□ 1.17
CDC42-204ENST00000411827 MIGA1Q8NAN2 632 aa22.34■■□□□ 1.17
CDC42-204ENST00000411827 BACH2Q9BYV9 841 aa22.34■■□□□ 1.17
CDC42-204ENST00000411827 ADARB2Q9NS39 739 aaKnown RBP22.34■■□□□ 1.17
CDC42-204ENST00000411827 AATFQ9NY61 560 aaKnown RBP eCLIP22.34■■□□□ 1.17
CDC42-204ENST00000411827 CTNNA3Q9UI47 895 aa22.34■■□□□ 1.17
CDC42-204ENST00000411827 PATL2C9JE40 543 aaKnown RBP22.33■■□□□ 1.17
CDC42-204ENST00000411827 M0R2C6 588 aa22.33■■□□□ 1.17
CDC42-204ENST00000411827 ALX1Q15699 326 aa22.33■■□□□ 1.17
CDC42-204ENST00000411827 ZBED3Q96IU2 234 aaPredicted RBP22.33■■□□□ 1.17
CDC42-204ENST00000411827 SEC62Q99442 399 aaKnown RBP22.33■■□□□ 1.17
CDC42-204ENST00000411827 HACL1Q9UJ83 578 aa22.33■■□□□ 1.17
CDC42-204ENST00000411827 ZMYM6O95789 1325 aa22.32■■□□□ 1.16
CDC42-204ENST00000411827 ARMT1Q9H993 441 aa22.32■■□□□ 1.16
CDC42-204ENST00000411827 ANO2Q9NQ90 1003 aa22.32■■□□□ 1.16
CDC42-204ENST00000411827 USP40Q9NVE5 1235 aa22.32■■□□□ 1.16
CDC42-204ENST00000411827 TAOK2Q9UL54 1235 aa22.32■■□□□ 1.16
CDC42-204ENST00000411827 USP50Q70EL3 339 aaPredicted RBP22.31■■□□□ 1.16
CDC42-204ENST00000411827 LCORLQ8N3X6 602 aa22.31■■□□□ 1.16
CDC42-204ENST00000411827 SLC4A4Q9Y6R1 1079 aa22.31■■□□□ 1.16
CDC42-204ENST00000411827 U3KPZ7 1027 aaPredicted RBP22.31■■□□□ 1.16
CDC42-204ENST00000411827 CHGBP05060 677 aa22.3■■□□□ 1.16
CDC42-204ENST00000411827 HSPD1P10809 573 aaKnown RBP22.3■■□□□ 1.16
CDC42-204ENST00000411827 RHBDL3P58872 404 aa22.3■■□□□ 1.16
CDC42-204ENST00000411827 TNFAIP1Q13829 316 aa22.3■■□□□ 1.16
CDC42-204ENST00000411827 KIF4BQ2VIQ3 1234 aa22.3■■□□□ 1.16
CDC42-204ENST00000411827 SLFNL1Q499Z3 407 aa22.3■■□□□ 1.16
CDC42-204ENST00000411827 CDC42EP5Q6NZY7 148 aa22.3■■□□□ 1.16
CDC42-204ENST00000411827 ZNF589Q86UQ0 364 aaPredicted RBP22.3■■□□□ 1.16
CDC42-204ENST00000411827 PNMA8AQ86V59 439 aaPredicted RBP22.3■■□□□ 1.16
CDC42-204ENST00000411827 AMOTL1Q8IY63 956 aa22.3■■□□□ 1.16
CDC42-204ENST00000411827 TEX11Q8IYF3 940 aa22.3■■□□□ 1.16
CDC42-204ENST00000411827 MAP4K1Q92918 833 aa22.3■■□□□ 1.16
CDC42-204ENST00000411827 PRMT6Q96LA8 375 aaPredicted RBP22.3■■□□□ 1.16
CDC42-204ENST00000411827 IDI2Q9BXS1 227 aa22.3■■□□□ 1.16
CDC42-204ENST00000411827 WNT10BO00744 389 aa22.29■■□□□ 1.16
CDC42-204ENST00000411827 APPP05067 770 aa22.29■■□□□ 1.16
CDC42-204ENST00000411827 USP5P45974 858 aa22.29■■□□□ 1.16
CDC42-204ENST00000411827 ZC3H15Q8WU90 426 aaKnown RBP22.29■■□□□ 1.16
CDC42-204ENST00000411827 ENTPD3O75355 529 aa22.28■■□□□ 1.16
CDC42-204ENST00000411827 MCCP23508 829 aa22.28■■□□□ 1.16
CDC42-204ENST00000411827 DYNLL1P63167 89 aaKnown RBP22.28■■□□□ 1.16
CDC42-204ENST00000411827 SPDYE2Q495Y8 402 aa22.28■■□□□ 1.16
CDC42-204ENST00000411827 RNF20Q5VTR2 975 aa22.28■■□□□ 1.16
CDC42-204ENST00000411827 SH3RF3Q8TEJ3 882 aaPredicted RBP22.28■■□□□ 1.16
CDC42-204ENST00000411827 SCN4AP35499 1836 aa22.27■■□□□ 1.16
CDC42-204ENST00000411827 GSG1L2A8MUP6 293 aa22.27■■□□□ 1.16
CDC42-204ENST00000411827 VEGFAP15692 232 aaPredicted RBP22.27■■□□□ 1.16
CDC42-204ENST00000411827 EPS15P42566 896 aa22.27■■□□□ 1.16
CDC42-204ENST00000411827 TNNI2P48788 182 aa22.27■■□□□ 1.16
CDC42-204ENST00000411827 CCDC129Q6ZRS4 1044 aa22.27■■□□□ 1.16
CDC42-204ENST00000411827 FAM83AQ86UY5 434 aa22.27■■□□□ 1.16
CDC42-204ENST00000411827 LSG1Q9H089 658 aaKnown RBP22.27■■□□□ 1.16
CDC42-204ENST00000411827 DHX36Q9H2U1 1008 aaKnown RBP22.27■■□□□ 1.16
CDC42-204ENST00000411827 PITPNM2Q9BZ72 1349 aa22.27■■□□□ 1.16
CDC42-204ENST00000411827 WDR90Q96KV7 1748 aa22.26■■□□□ 1.15
CDC42-204ENST00000411827 EPHX2P34913 555 aa22.26■■□□□ 1.15
CDC42-204ENST00000411827 IFNL3Q8IZI9 196 aa22.26■■□□□ 1.15
CDC42-204ENST00000411827 NAPBQ9H115 298 aa22.26■■□□□ 1.15
CDC42-204ENST00000411827 TDRD3Q9H7E2 651 aaKnown RBP22.26■■□□□ 1.15
CDC42-204ENST00000411827 ARPP21Q9UBL0 812 aaPredicted RBP22.26■■□□□ 1.15
CDC42-204ENST00000411827 ZNF70Q9UC06 446 aaPredicted RBP22.26■■□□□ 1.15
CDC42-204ENST00000411827 WDHD1O75717 1129 aaPredicted RBP22.25■■□□□ 1.15
CDC42-204ENST00000411827 TDO2P48775 406 aa22.25■■□□□ 1.15
CDC42-204ENST00000411827 NT5C2P49902 561 aa22.25■■□□□ 1.15
CDC42-204ENST00000411827 TBC1D10BQ4KMP7 808 aaPredicted RBP22.25■■□□□ 1.15
CDC42-204ENST00000411827 SAMD7Q7Z3H4 446 aa22.25■■□□□ 1.15
CDC42-204ENST00000411827 APOBEC3FQ8IUX4 373 aaKnown RBP22.25■■□□□ 1.15
CDC42-204ENST00000411827 TGFBRAP1Q8WUH2 860 aa22.25■■□□□ 1.15
CDC42-204ENST00000411827 USP26Q9BXU7 913 aa22.25■■□□□ 1.15
CDC42-204ENST00000411827 IL25Q9H293 177 aa22.25■■□□□ 1.15
CDC42-204ENST00000411827 DCP1AQ9NPI6 582 aaPredicted RBP22.25■■□□□ 1.15
CDC42-204ENST00000411827 MKRN1Q9UHC7 482 aaKnown RBP22.25■■□□□ 1.15
CDC42-204ENST00000411827 COL2A1P02458 1487 aaPredicted RBP22.24■■□□□ 1.15
CDC42-204ENST00000411827 FGAP02671 866 aa22.24■■□□□ 1.15
CDC42-204ENST00000411827 IMMTQ16891 758 aaKnown RBP22.24■■□□□ 1.15
CDC42-204ENST00000411827 SBK1Q52WX2 424 aa22.24■■□□□ 1.15
CDC42-204ENST00000411827 RBM26Q5T8P6 1007 aaKnown RBP22.24■■□□□ 1.15
CDC42-204ENST00000411827 IL27Q8NEV9 243 aa22.24■■□□□ 1.15
CDC42-204ENST00000411827 SLC3A2P08195 630 aaKnown RBP22.23■■□□□ 1.15
CDC42-204ENST00000411827 PCP11498 1178 aaKnown RBP22.23■■□□□ 1.15
CDC42-204ENST00000411827 ZKSCAN1P17029 563 aaPredicted RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms