RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 WEE1P30291 646 aa4.43□□□□□ -1.7
RNU6-1140P-201ENST00000410517 SRPK2P78362 688 aaKnown RBP4.43□□□□□ -1.7
RNU6-1140P-201ENST00000410517 CDCA8Q53HL2 280 aa4.43□□□□□ -1.7
RNU6-1140P-201ENST00000410517 TMEM164Q5U3C3 297 aa4.43□□□□□ -1.7
RNU6-1140P-201ENST00000410517 FBXO15Q8NCQ5 510 aaPredicted RBP4.43□□□□□ -1.7
RNU6-1140P-201ENST00000410517 HRASLS5Q96KN8 279 aa4.43□□□□□ -1.7
RNU6-1140P-201ENST00000410517 DIRC2Q96SL1 478 aa4.43□□□□□ -1.7
RNU6-1140P-201ENST00000410517 ACSS3Q9H6R3 686 aa4.43□□□□□ -1.7
RNU6-1140P-201ENST00000410517 FAM105AQ9NUU6 356 aa4.43□□□□□ -1.7
RNU6-1140P-201ENST00000410517 CCDC180Q9P1Z9 1646 aa4.43□□□□□ -1.7
RNU6-1140P-201ENST00000410517 GSTM4Q03013 218 aa4.42□□□□□ -1.7
RNU6-1140P-201ENST00000410517 AKAP4Q5JQC9 854 aa4.42□□□□□ -1.7
RNU6-1140P-201ENST00000410517 SEZ6L2Q6UXD5 910 aa4.42□□□□□ -1.7
RNU6-1140P-201ENST00000410517 PARD6AQ9NPB6 346 aa4.42□□□□□ -1.7
RNU6-1140P-201ENST00000410517 DZANK1Q9NVP4 752 aa4.42□□□□□ -1.7
RNU6-1140P-201ENST00000410517 FAM13BQ9NYF5 915 aa4.42□□□□□ -1.7
RNU6-1140P-201ENST00000410517 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.42□□□□□ -1.7
RNU6-1140P-201ENST00000410517 TMEM88BA6NKF7 163 aa4.41□□□□□ -1.7
RNU6-1140P-201ENST00000410517 NUAK1O60285 661 aa4.41□□□□□ -1.7
RNU6-1140P-201ENST00000410517 GLI1P08151 1106 aa4.41□□□□□ -1.7
RNU6-1140P-201ENST00000410517 ERCC3P19447 782 aa4.41□□□□□ -1.7
RNU6-1140P-201ENST00000410517 ATP2B4P23634 1241 aa4.41□□□□□ -1.7
RNU6-1140P-201ENST00000410517 BRD2P25440 801 aaKnown RBP4.41□□□□□ -1.7
RNU6-1140P-201ENST00000410517 ITGAEP38570 1179 aa4.41□□□□□ -1.7
RNU6-1140P-201ENST00000410517 AFMP43652 599 aa4.41□□□□□ -1.7
RNU6-1140P-201ENST00000410517 ASPAP45381 313 aa4.41□□□□□ -1.7
RNU6-1140P-201ENST00000410517 TRIM26Q12899 539 aaPredicted RBP4.41□□□□□ -1.7
RNU6-1140P-201ENST00000410517 IFI16Q16666 785 aaKnown RBP4.41□□□□□ -1.7
RNU6-1140P-201ENST00000410517 ATG14Q6ZNE5 492 aa4.41□□□□□ -1.7
RNU6-1140P-201ENST00000410517 ARHGAP27Q6ZUM4 889 aa4.41□□□□□ -1.7
RNU6-1140P-201ENST00000410517 VN1R5Q7Z5H4 357 aa4.41□□□□□ -1.7
RNU6-1140P-201ENST00000410517 BSNDQ8WZ55 320 aa4.41□□□□□ -1.7
RNU6-1140P-201ENST00000410517 ZCCHC4Q9H5U6 513 aa4.41□□□□□ -1.7
RNU6-1140P-201ENST00000410517 CTNND2Q9UQB3 1225 aa4.41□□□□□ -1.7
RNU6-1140P-201ENST00000410517 GNEQ9Y223 722 aaKnown RBP4.41□□□□□ -1.7
RNU6-1140P-201ENST00000410517 PITPNM2Q9BZ72 1349 aa4.41□□□□□ -1.7
RNU6-1140P-201ENST00000410517 TCAF2A6NFQ2 919 aa4.4□□□□□ -1.71
RNU6-1140P-201ENST00000410517 FAM87AP0C7U9 286 aa4.4□□□□□ -1.71
RNU6-1140P-201ENST00000410517 SYN1P17600 705 aa4.4□□□□□ -1.71
RNU6-1140P-201ENST00000410517 CCDC27Q2M243 656 aa4.4□□□□□ -1.71
RNU6-1140P-201ENST00000410517 TMEM67Q5HYA8 995 aa4.4□□□□□ -1.71
RNU6-1140P-201ENST00000410517 GPR152Q8TDT2 470 aa4.4□□□□□ -1.71
RNU6-1140P-201ENST00000410517 STK32AQ8WU08 396 aa4.4□□□□□ -1.71
RNU6-1140P-201ENST00000410517 NSUN3Q9H649 340 aaKnown RBP4.4□□□□□ -1.71
RNU6-1140P-201ENST00000410517 SOX17Q9H6I2 414 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1140P-201ENST00000410517 ELP3Q9H9T3 547 aa4.4□□□□□ -1.71
RNU6-1140P-201ENST00000410517 CD320Q9NPF0 282 aa4.4□□□□□ -1.71
RNU6-1140P-201ENST00000410517 SALL4Q9UJQ4 1053 aa4.4□□□□□ -1.71
RNU6-1140P-201ENST00000410517 ZMIZ1Q9ULJ6 1067 aa4.4□□□□□ -1.71
RNU6-1140P-201ENST00000410517 AP4E1Q9UPM8 1137 aa4.4□□□□□ -1.71
RNU6-1140P-201ENST00000410517 IVNS1ABPQ9Y6Y0 642 aa4.4□□□□□ -1.71
RNU6-1140P-201ENST00000410517 U3KQE9 123 aa4.4□□□□□ -1.71
RNU6-1140P-201ENST00000410517 TMEM265A0A087WTH1 108 aa4.39□□□□□ -1.71
RNU6-1140P-201ENST00000410517 BMP7P18075 431 aa4.39□□□□□ -1.71
RNU6-1140P-201ENST00000410517 CDK5R2Q13319 367 aa4.39□□□□□ -1.71
RNU6-1140P-201ENST00000410517 FAM26DQ5JW98 314 aa4.39□□□□□ -1.71
RNU6-1140P-201ENST00000410517 SND1Q7KZF4 910 aaKnown RBP eCLIP4.39□□□□□ -1.71
RNU6-1140P-201ENST00000410517 KIRREL1Q96J84 757 aa4.39□□□□□ -1.71
RNU6-1140P-201ENST00000410517 IRF2BPLQ9H1B7 796 aa4.39□□□□□ -1.71
RNU6-1140P-201ENST00000410517 KCNK12Q9HB15 430 aa4.39□□□□□ -1.71
RNU6-1140P-201ENST00000410517 RAD18Q9NS91 495 aa4.39□□□□□ -1.71
RNU6-1140P-201ENST00000410517 TMEM63CQ9P1W3 806 aa4.39□□□□□ -1.71
RNU6-1140P-201ENST00000410517 CNTN3Q9P232 1028 aa4.39□□□□□ -1.71
RNU6-1140P-201ENST00000410517 EGFL7Q9UHF1 273 aa4.39□□□□□ -1.71
RNU6-1140P-201ENST00000410517 A0A0G2JLL6 359 aaPredicted RBP4.38□□□□□ -1.71
RNU6-1140P-201ENST00000410517 ESRRAP11474 423 aaPredicted RBP4.38□□□□□ -1.71
RNU6-1140P-201ENST00000410517 CES1P23141 567 aa4.38□□□□□ -1.71
RNU6-1140P-201ENST00000410517 SSFA2P28290 1259 aa4.38□□□□□ -1.71
RNU6-1140P-201ENST00000410517 KRTAP10-2P60368 255 aa4.38□□□□□ -1.71
RNU6-1140P-201ENST00000410517 ZP2Q05996 745 aa4.38□□□□□ -1.71
RNU6-1140P-201ENST00000410517 SF3B2Q13435 895 aaKnown RBP4.38□□□□□ -1.71
RNU6-1140P-201ENST00000410517 PRRT2Q7Z6L0 340 aaPredicted RBP4.38□□□□□ -1.71
RNU6-1140P-201ENST00000410517 TMEM102Q8N9M5 508 aaPredicted RBP4.38□□□□□ -1.71
RNU6-1140P-201ENST00000410517 SAP130Q9H0E3 1048 aa4.38□□□□□ -1.71
RNU6-1140P-201ENST00000410517 GZF1Q9H116 711 aaPredicted RBP4.38□□□□□ -1.71
RNU6-1140P-201ENST00000410517 CXXC1Q9P0U4 656 aaPredicted RBP4.38□□□□□ -1.71
RNU6-1140P-201ENST00000410517 SMG5Q9UPR3 1016 aaKnown RBP4.38□□□□□ -1.71
RNU6-1140P-201ENST00000410517 ZAP70P43403 619 aa4.37□□□□□ -1.71
RNU6-1140P-201ENST00000410517 LINC00310P59036 64 aa4.37□□□□□ -1.71
RNU6-1140P-201ENST00000410517 FGD1P98174 961 aa4.37□□□□□ -1.71
RNU6-1140P-201ENST00000410517 IKZF1Q13422 519 aa4.37□□□□□ -1.71
RNU6-1140P-201ENST00000410517 NFIXQ14938 502 aa4.37□□□□□ -1.71
RNU6-1140P-201ENST00000410517 ZNF438Q7Z4V0 828 aa4.37□□□□□ -1.71
RNU6-1140P-201ENST00000410517 NXPE3Q969Y0 559 aa4.37□□□□□ -1.71
RNU6-1140P-201ENST00000410517 PLAGL2Q9UPG8 496 aa4.37□□□□□ -1.71
RNU6-1140P-201ENST00000410517 ETV2O00321 342 aaPredicted RBP4.36□□□□□ -1.71
RNU6-1140P-201ENST00000410517 PRMT3O60678 531 aa4.36□□□□□ -1.71
RNU6-1140P-201ENST00000410517 CEACAM5P06731 702 aa4.36□□□□□ -1.71
RNU6-1140P-201ENST00000410517 ITIH2P19823 946 aa4.36□□□□□ -1.71
RNU6-1140P-201ENST00000410517 MAOBP27338 520 aa4.36□□□□□ -1.71
RNU6-1140P-201ENST00000410517 OXCT1P55809 520 aa4.36□□□□□ -1.71
RNU6-1140P-201ENST00000410517 C16orf46Q6P387 395 aa4.36□□□□□ -1.71
RNU6-1140P-201ENST00000410517 GLYCTKQ8IVS8 523 aa4.36□□□□□ -1.71
RNU6-1140P-201ENST00000410517 ABTB2Q8N961 1025 aa4.36□□□□□ -1.71
RNU6-1140P-201ENST00000410517 C1orf127Q8N9H9 656 aa4.36□□□□□ -1.71
RNU6-1140P-201ENST00000410517 ASAP3Q8TDY4 903 aa4.36□□□□□ -1.71
RNU6-1140P-201ENST00000410517 OSMRQ99650 979 aa4.36□□□□□ -1.71
RNU6-1140P-201ENST00000410517 DCP1AQ9NPI6 582 aaPredicted RBP4.36□□□□□ -1.71
RNU6-1140P-201ENST00000410517 CTSBP07858 339 aa4.35□□□□□ -1.71
RNU6-1140P-201ENST00000410517 MED14OSP0DP75 135 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms