RNA–Protein interactions for RNA: ENST00000410038.5

LIMS2-209, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-209ENST00000410038 WNT10BO00744 389 aa17.36■□□□□ 0.37
LIMS2-209ENST00000410038 NBPF9Q3BBW0 867 aa17.36■□□□□ 0.37
LIMS2-209ENST00000410038 BMP2KLQ5H9B9 411 aa17.36■□□□□ 0.37
LIMS2-209ENST00000410038 APOBEC3HQ6NTF7 200 aaKnown RBP17.36■□□□□ 0.37
LIMS2-209ENST00000410038 USP50Q70EL3 339 aaPredicted RBP17.36■□□□□ 0.37
LIMS2-209ENST00000410038 CDK5RAP2Q96SN8 1893 aa17.35■□□□□ 0.37
LIMS2-209ENST00000410038 RNF113AO15541 343 aaKnown RBP17.35■□□□□ 0.37
LIMS2-209ENST00000410038 ZFYP08048 801 aaPredicted RBP17.35■□□□□ 0.37
LIMS2-209ENST00000410038 UBE3CQ15386 1083 aa17.35■□□□□ 0.37
LIMS2-209ENST00000410038 JMYQ8N9B5 988 aa17.35■□□□□ 0.37
LIMS2-209ENST00000410038 RFX7Q2KHR2 1363 aa17.34■□□□□ 0.37
LIMS2-209ENST00000410038 GPR75-ASB3A0A0A6YYF3 556 aa17.34■□□□□ 0.37
LIMS2-209ENST00000410038 LRRFIP1Q32MZ4 808 aaKnown RBP17.34■□□□□ 0.37
LIMS2-209ENST00000410038 PNMA8AQ86V59 439 aaPredicted RBP17.34■□□□□ 0.37
LIMS2-209ENST00000410038 TICAM2Q86XR7 235 aa17.34■□□□□ 0.37
LIMS2-209ENST00000410038 BTDP43251 543 aa17.33■□□□□ 0.37
LIMS2-209ENST00000410038 EAPPQ56P03 285 aaPredicted RBP17.33■□□□□ 0.37
LIMS2-209ENST00000410038 MIGA1Q8NAN2 632 aa17.33■□□□□ 0.37
LIMS2-209ENST00000410038 TDRD3Q9H7E2 651 aaKnown RBP17.33■□□□□ 0.37
LIMS2-209ENST00000410038 ASTN2O75129 1339 aaPredicted RBP17.33■□□□□ 0.36
LIMS2-209ENST00000410038 POTEIP0CG38 1075 aa17.32■□□□□ 0.36
LIMS2-209ENST00000410038 POTEJP0CG39 1038 aa17.32■□□□□ 0.36
LIMS2-209ENST00000410038 AATFQ9NY61 560 aaKnown RBP eCLIP17.32■□□□□ 0.36
LIMS2-209ENST00000410038 FOCADQ5VW36 1801 aa17.32■□□□□ 0.36
LIMS2-209ENST00000410038 PPP4CP60510 307 aa17.32■□□□□ 0.36
LIMS2-209ENST00000410038 DYNLL1P63167 89 aaKnown RBP17.32■□□□□ 0.36
LIMS2-209ENST00000410038 CDC42EP5Q6NZY7 148 aa17.32■□□□□ 0.36
LIMS2-209ENST00000410038 APPBP2Q92624 585 aa17.32■□□□□ 0.36
LIMS2-209ENST00000410038 OSBP2Q969R2 916 aa17.32■□□□□ 0.36
LIMS2-209ENST00000410038 PUS7LQ9H0K6 701 aaKnown RBP17.32■□□□□ 0.36
LIMS2-209ENST00000410038 CLRN2A0PK11 232 aa17.31■□□□□ 0.36
LIMS2-209ENST00000410038 MYO1BO43795 1136 aa17.31■□□□□ 0.36
LIMS2-209ENST00000410038 BAG3O95817 575 aa17.31■□□□□ 0.36
LIMS2-209ENST00000410038 RHBDL3P58872 404 aa17.31■□□□□ 0.36
LIMS2-209ENST00000410038 SPDYE2Q495Y8 402 aa17.31■□□□□ 0.36
LIMS2-209ENST00000410038 ZMYM1Q5SVZ6 1142 aa17.31■□□□□ 0.36
LIMS2-209ENST00000410038 RIOK1Q9BRS2 568 aaKnown RBP17.31■□□□□ 0.36
LIMS2-209ENST00000410038 NOL10Q9BSC4 688 aaKnown RBP17.31■□□□□ 0.36
LIMS2-209ENST00000410038 USP40Q9NVE5 1235 aa17.31■□□□□ 0.36
LIMS2-209ENST00000410038 ZNF70Q9UC06 446 aaPredicted RBP17.31■□□□□ 0.36
LIMS2-209ENST00000410038 MAGEB6P1A0A0J9YX57 407 aa17.3■□□□□ 0.36
LIMS2-209ENST00000410038 ZC3H15Q8WU90 426 aaKnown RBP17.3■□□□□ 0.36
LIMS2-209ENST00000410038 FAM227BQ96M60 508 aa17.3■□□□□ 0.36
LIMS2-209ENST00000410038 SEC62Q99442 399 aaKnown RBP17.3■□□□□ 0.36
LIMS2-209ENST00000410038 GGA3Q9NZ52 723 aa17.3■□□□□ 0.36
LIMS2-209ENST00000410038 PGAP2Q9UHJ9 254 aa17.3■□□□□ 0.36
LIMS2-209ENST00000410038 NMIQ13287 307 aaPredicted RBP17.29■□□□□ 0.36
LIMS2-209ENST00000410038 ANGEL2Q5VTE6 544 aaKnown RBP17.29■□□□□ 0.36
LIMS2-209ENST00000410038 SH3RF3Q8TEJ3 882 aaPredicted RBP17.29■□□□□ 0.36
LIMS2-209ENST00000410038 DIAPH3Q9NSV4 1193 aa17.29■□□□□ 0.36
LIMS2-209ENST00000410038 A0A0D9SFI3 127 aa17.29■□□□□ 0.36
LIMS2-209ENST00000410038 HIP1O00291 1037 aa17.29■□□□□ 0.36
LIMS2-209ENST00000410038 MBD4O95243 580 aa17.29■□□□□ 0.36
LIMS2-209ENST00000410038 CHMLP26374 656 aa17.29■□□□□ 0.36
LIMS2-209ENST00000410038 CACNB3P54284 484 aa17.29■□□□□ 0.36
LIMS2-209ENST00000410038 LCORLQ8N3X6 602 aa17.29■□□□□ 0.36
LIMS2-209ENST00000410038 ARMT1Q9H993 441 aa17.29■□□□□ 0.36
LIMS2-209ENST00000410038 CLEC11AQ9Y240 323 aa17.29■□□□□ 0.36
LIMS2-209ENST00000410038 M0R2C6 588 aa17.28■□□□□ 0.36
LIMS2-209ENST00000410038 PLCG2P16885 1265 aa17.28■□□□□ 0.36
LIMS2-209ENST00000410038 LDHDQ86WU2 507 aa17.28■□□□□ 0.36
LIMS2-209ENST00000410038 CERS3Q8IU89 383 aa17.28■□□□□ 0.36
LIMS2-209ENST00000410038 AIDAQ96BJ3 306 aa17.28■□□□□ 0.36
LIMS2-209ENST00000410038 VEZTQ9HBM0 779 aa17.28■□□□□ 0.36
LIMS2-209ENST00000410038 HELLSQ9NRZ9 838 aa17.28■□□□□ 0.36
LIMS2-209ENST00000410038 PITPNM2Q9BZ72 1349 aa17.27■□□□□ 0.36
LIMS2-209ENST00000410038 WDHD1O75717 1129 aaPredicted RBP17.27■□□□□ 0.36
LIMS2-209ENST00000410038 CWC27Q6UX04 472 aaKnown RBP17.27■□□□□ 0.36
LIMS2-209ENST00000410038 TEX11Q8IYF3 940 aa17.27■□□□□ 0.36
LIMS2-209ENST00000410038 TMOD2Q9NZR1 351 aa17.27■□□□□ 0.36
LIMS2-209ENST00000410038 SCAF8Q9UPN6 1271 aaKnown RBP17.27■□□□□ 0.36
LIMS2-209ENST00000410038 MYH1P12882 1939 aa17.27■□□□□ 0.35
LIMS2-209ENST00000410038 BAZ2AQ9UIF9 1905 aaKnown RBP17.27■□□□□ 0.35
LIMS2-209ENST00000410038 GPAA1O43292 621 aa17.26■□□□□ 0.35
LIMS2-209ENST00000410038 NFIAQ12857 509 aa17.26■□□□□ 0.35
LIMS2-209ENST00000410038 MCMDC2Q4G0Z9 681 aa17.26■□□□□ 0.35
LIMS2-209ENST00000410038 FKBP1CQ5VVH2 108 aa17.26■□□□□ 0.35
LIMS2-209ENST00000410038 DCPSQ96C86 337 aaKnown RBP17.26■□□□□ 0.35
LIMS2-209ENST00000410038 STRBPQ96SI9 672 aaKnown RBP17.26■□□□□ 0.35
LIMS2-209ENST00000410038 IDI2Q9BXS1 227 aa17.26■□□□□ 0.35
LIMS2-209ENST00000410038 TCP10L2B9ZVM9 353 aa17.26■□□□□ 0.35
LIMS2-209ENST00000410038 HTRA3P83110 453 aa17.26■□□□□ 0.35
LIMS2-209ENST00000410038 CCDC129Q6ZRS4 1044 aa17.26■□□□□ 0.35
LIMS2-209ENST00000410038 APOBEC3FQ8IUX4 373 aaKnown RBP17.26■□□□□ 0.35
LIMS2-209ENST00000410038 DDX4Q9NQI0 724 aaKnown RBP17.26■□□□□ 0.35
LIMS2-209ENST00000410038 FAM198AQ9UFP1 575 aa17.26■□□□□ 0.35
LIMS2-209ENST00000410038 NAV1Q8NEY1 1877 aa17.25■□□□□ 0.35
LIMS2-209ENST00000410038 CNTNAP1P78357 1384 aa17.25■□□□□ 0.35
LIMS2-209ENST00000410038 MAP1SQ66K74 1059 aaPredicted RBP17.25■□□□□ 0.35
LIMS2-209ENST00000410038 TGFBRAP1Q8WUH2 860 aa17.25■□□□□ 0.35
LIMS2-209ENST00000410038 CRNKL1Q9BZJ0 848 aaKnown RBP17.25■□□□□ 0.35
LIMS2-209ENST00000410038 IL25Q9H293 177 aa17.25■□□□□ 0.35
LIMS2-209ENST00000410038 PRKAB2O43741 272 aa17.24■□□□□ 0.35
LIMS2-209ENST00000410038 CDC45O75419 566 aa17.24■□□□□ 0.35
LIMS2-209ENST00000410038 PICALMQ13492 652 aa17.24■□□□□ 0.35
LIMS2-209ENST00000410038 CHADLQ6NUI6 762 aa17.24■□□□□ 0.35
LIMS2-209ENST00000410038 ZNF589Q86UQ0 364 aaPredicted RBP17.24■□□□□ 0.35
LIMS2-209ENST00000410038 SULF1Q8IWU6 871 aa17.24■□□□□ 0.35
LIMS2-209ENST00000410038 TCP10Q12799 353 aa17.23■□□□□ 0.35
LIMS2-209ENST00000410038 TNFAIP1Q13829 316 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms