RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 CRHR2Q13324 411 aa18.26■□□□□ 0.51
CBX3-203ENST00000409747 MVPQ14764 893 aaKnown RBP18.26■□□□□ 0.51
CBX3-203ENST00000409747 DIXDC1Q155Q3 683 aa18.26■□□□□ 0.51
CBX3-203ENST00000409747 OTUD5Q96G74 571 aa18.26■□□□□ 0.51
CBX3-203ENST00000409747 ERO1AQ96HE7 468 aa18.26■□□□□ 0.51
CBX3-203ENST00000409747 MS4A4AQ96JQ5 239 aa18.26■□□□□ 0.51
CBX3-203ENST00000409747 ZNF341Q9BYN7 854 aa18.26■□□□□ 0.51
CBX3-203ENST00000409747 CCL15-CCL14A0A0B4J2E2 113 aa18.25■□□□□ 0.51
CBX3-203ENST00000409747 A0A1B0GUL7 405 aa18.25■□□□□ 0.51
CBX3-203ENST00000409747 WDHD1O75717 1129 aaPredicted RBP18.25■□□□□ 0.51
CBX3-203ENST00000409747 BCAR3O75815 825 aa18.25■□□□□ 0.51
CBX3-203ENST00000409747 ADORA1P30542 326 aa18.25■□□□□ 0.51
CBX3-203ENST00000409747 CCL15Q16663 113 aa18.25■□□□□ 0.51
CBX3-203ENST00000409747 CDC42EP5Q6NZY7 148 aa18.25■□□□□ 0.51
CBX3-203ENST00000409747 ERO1BQ86YB8 467 aa18.25■□□□□ 0.51
CBX3-203ENST00000409747 SLF2Q8IX21 1173 aa18.25■□□□□ 0.51
CBX3-203ENST00000409747 PTPN18Q99952 460 aa18.25■□□□□ 0.51
CBX3-203ENST00000409747 HNRNPUQ00839 825 aaKnown RBP eCLIP18.24■□□□□ 0.51
CBX3-203ENST00000409747 ZKSCAN2Q63HK3 967 aa18.24■□□□□ 0.51
CBX3-203ENST00000409747 DZIP1Q86YF9 867 aaKnown RBP18.24■□□□□ 0.51
CBX3-203ENST00000409747 CNKSR2Q8WXI2 1034 aa18.24■□□□□ 0.51
CBX3-203ENST00000409747 SNCAIPQ9Y6H5 919 aa18.24■□□□□ 0.51
CBX3-203ENST00000409747 TIMM10P62072 90 aa18.23■□□□□ 0.51
CBX3-203ENST00000409747 TFCP2Q12800 502 aa18.23■□□□□ 0.51
CBX3-203ENST00000409747 RASGRF1Q13972 1273 aa18.23■□□□□ 0.51
CBX3-203ENST00000409747 SPTY2D1Q68D10 685 aaPredicted RBP18.23■□□□□ 0.51
CBX3-203ENST00000409747 BRI3BPQ8WY22 251 aa18.23■□□□□ 0.51
CBX3-203ENST00000409747 CLUAP1Q96AJ1 413 aa18.23■□□□□ 0.51
CBX3-203ENST00000409747 TRIM17Q9Y577 477 aa18.23■□□□□ 0.51
CBX3-203ENST00000409747 TNRC18O15417 2968 aaPredicted RBP18.23■□□□□ 0.51
CBX3-203ENST00000409747 CETPP11597 493 aa18.23■□□□□ 0.51
CBX3-203ENST00000409747 XAGE2Q96GT9 111 aa18.23■□□□□ 0.51
CBX3-203ENST00000409747 ZCCHC17Q9NP64 241 aaKnown RBP18.23■□□□□ 0.51
CBX3-203ENST00000409747 USP40Q9NVE5 1235 aa18.23■□□□□ 0.51
CBX3-203ENST00000409747 MYH2Q9UKX2 1941 aa18.23■□□□□ 0.51
CBX3-203ENST00000409747 SP3Q02447 781 aa18.22■□□□□ 0.51
CBX3-203ENST00000409747 TCP10Q12799 353 aa18.22■□□□□ 0.51
CBX3-203ENST00000409747 PPIL2Q13356 520 aa18.22■□□□□ 0.51
CBX3-203ENST00000409747 SNAPC2Q13487 334 aa18.22■□□□□ 0.51
CBX3-203ENST00000409747 TAF1CQ15572 869 aaPredicted RBP18.22■□□□□ 0.51
CBX3-203ENST00000409747 ZKSCAN4Q969J2 545 aaPredicted RBP18.22■□□□□ 0.51
CBX3-203ENST00000409747 ZFYVE28Q9HCC9 887 aa18.22■□□□□ 0.51
CBX3-203ENST00000409747 ABCF2Q9UG63 623 aa18.22■□□□□ 0.51
CBX3-203ENST00000409747 AK9Q5TCS8 1911 aa18.22■□□□□ 0.51
CBX3-203ENST00000409747 GAKO14976 1311 aa18.21■□□□□ 0.51
CBX3-203ENST00000409747 G3BP1Q13283 466 aaKnown RBP eCLIP18.21■□□□□ 0.51
CBX3-203ENST00000409747 ARHGEF6Q15052 776 aa18.21■□□□□ 0.51
CBX3-203ENST00000409747 GORABQ5T7V8 394 aa18.21■□□□□ 0.51
CBX3-203ENST00000409747 DIEXFQ68CQ4 756 aaKnown RBP18.21■□□□□ 0.51
CBX3-203ENST00000409747 OTOP1Q7RTM1 612 aa18.21■□□□□ 0.51
CBX3-203ENST00000409747 PPATQ06203 517 aa18.2■□□□□ 0.5
CBX3-203ENST00000409747 NFIAQ12857 509 aa18.2■□□□□ 0.5
CBX3-203ENST00000409747 MIGA2Q7L4E1 593 aa18.2■□□□□ 0.5
CBX3-203ENST00000409747 NEUROD6Q96NK8 337 aa18.2■□□□□ 0.5
CBX3-203ENST00000409747 TNNQ9UQP3 1299 aa18.2■□□□□ 0.5
CBX3-203ENST00000409747 DOCK2Q92608 1830 aa18.2■□□□□ 0.5
CBX3-203ENST00000409747 FTSJ3Q8IY81 847 aaKnown RBP18.2■□□□□ 0.5
CBX3-203ENST00000409747 MIER1Q8N108 512 aa18.2■□□□□ 0.5
CBX3-203ENST00000409747 TMEM57Q8N5G2 664 aa18.2■□□□□ 0.5
CBX3-203ENST00000409747 CD99L2Q8TCZ2 262 aa18.2■□□□□ 0.5
CBX3-203ENST00000409747 IDI2Q9BXS1 227 aa18.2■□□□□ 0.5
CBX3-203ENST00000409747 FAM198AQ9UFP1 575 aa18.2■□□□□ 0.5
CBX3-203ENST00000409747 HTTP42858 3142 aa18.2■□□□□ 0.5
CBX3-203ENST00000409747 PNMA6EA0A0J9YXQ4 647 aa18.19■□□□□ 0.5
CBX3-203ENST00000409747 IRF6O14896 467 aa18.19■□□□□ 0.5
CBX3-203ENST00000409747 ENTPD3O75355 529 aa18.19■□□□□ 0.5
CBX3-203ENST00000409747 ERICH6Q7L0X2 663 aa18.19■□□□□ 0.5
CBX3-203ENST00000409747 FAM43AQ8N2R8 423 aa18.19■□□□□ 0.5
CBX3-203ENST00000409747 FAM163AQ96GL9 167 aaPredicted RBP18.19■□□□□ 0.5
CBX3-203ENST00000409747 EFCC1Q9HA90 598 aa18.19■□□□□ 0.5
CBX3-203ENST00000409747 ZNF112Q9UJU3 913 aa18.19■□□□□ 0.5
CBX3-203ENST00000409747 MROH7-TTC4A0A0A0MT08 1334 aa18.18■□□□□ 0.5
CBX3-203ENST00000409747 RFX7Q2KHR2 1363 aa18.18■□□□□ 0.5
CBX3-203ENST00000409747 INPP5BP32019 993 aa18.18■□□□□ 0.5
CBX3-203ENST00000409747 RGS3P49796 1198 aa18.18■□□□□ 0.5
CBX3-203ENST00000409747 NOL9Q5SY16 702 aaKnown RBP18.18■□□□□ 0.5
CBX3-203ENST00000409747 PTPN22Q9Y2R2 807 aa18.18■□□□□ 0.5
CBX3-203ENST00000409747 ARID4AP29374 1257 aaPredicted RBP18.17■□□□□ 0.5
CBX3-203ENST00000409747 GSTO1P78417 241 aa18.17■□□□□ 0.5
CBX3-203ENST00000409747 SPATA5Q8NB90 893 aa18.17■□□□□ 0.5
CBX3-203ENST00000409747 MAP4K4O95819 1239 aaPredicted RBP18.16■□□□□ 0.5
CBX3-203ENST00000409747 UQCRFS1P1P0C7P4 283 aa18.16■□□□□ 0.5
CBX3-203ENST00000409747 BTDP43251 543 aa18.16■□□□□ 0.5
CBX3-203ENST00000409747 ZSCAN29Q8IWY8 852 aaPredicted RBP18.16■□□□□ 0.5
CBX3-203ENST00000409747 HMG20BQ9P0W2 317 aa18.16■□□□□ 0.5
CBX3-203ENST00000409747 BTBD19C9JJ37 291 aa18.15■□□□□ 0.5
CBX3-203ENST00000409747 TLR2O60603 784 aa18.15■□□□□ 0.5
CBX3-203ENST00000409747 LDHCP07864 332 aa18.15■□□□□ 0.5
CBX3-203ENST00000409747 MECOMQ03112 1051 aa18.15■□□□□ 0.5
CBX3-203ENST00000409747 OS9Q13438 667 aaPredicted RBP18.15■□□□□ 0.5
CBX3-203ENST00000409747 POLA2Q14181 598 aa18.15■□□□□ 0.5
CBX3-203ENST00000409747 GPR108Q9NPR9 543 aa18.15■□□□□ 0.5
CBX3-203ENST00000409747 ZBED9Q6R2W3 1325 aa18.15■□□□□ 0.5
CBX3-203ENST00000409747 ATRNL1Q5VV63 1379 aa18.15■□□□□ 0.5
CBX3-203ENST00000409747 KIF22Q14807 665 aa18.15■□□□□ 0.5
CBX3-203ENST00000409747 ITPRIPQ8IWB1 547 aa18.15■□□□□ 0.5
CBX3-203ENST00000409747 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.15■□□□□ 0.5
CBX3-203ENST00000409747 SSH3Q8TE77 659 aa18.15■□□□□ 0.5
CBX3-203ENST00000409747 KCNH4Q9UQ05 1017 aa18.15■□□□□ 0.5
CBX3-203ENST00000409747 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms