RNA–Protein interactions for RNA: ENST00000409532.5

ITGA6-203, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 3,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-203ENST00000409532 GIGYF2Q6Y7W6 1299 aaKnown RBP13.02□□□□□ -0.33
ITGA6-203ENST00000409532 KCPQ6ZWJ8 1503 aa13.02□□□□□ -0.33
ITGA6-203ENST00000409532 ZBTB43O43298 467 aa13.01□□□□□ -0.33
ITGA6-203ENST00000409532 IARSP41252 1262 aaKnown RBP13.01□□□□□ -0.33
ITGA6-203ENST00000409532 CTSWP56202 376 aa13.01□□□□□ -0.33
ITGA6-203ENST00000409532 ARMCX5Q6P1M9 558 aa13.01□□□□□ -0.33
ITGA6-203ENST00000409532 MAGEB6Q8N7X4 407 aa13.01□□□□□ -0.33
ITGA6-203ENST00000409532 ARMT1Q9H993 441 aa13.01□□□□□ -0.33
ITGA6-203ENST00000409532 IFIT3O14879 490 aaKnown RBP13.01□□□□□ -0.33
ITGA6-203ENST00000409532 PRKAB2O43741 272 aa13.01□□□□□ -0.33
ITGA6-203ENST00000409532 RBM6P78332 1123 aaKnown RBP13.01□□□□□ -0.33
ITGA6-203ENST00000409532 SMAP1Q8IYB5 467 aaPredicted RBP13.01□□□□□ -0.33
ITGA6-203ENST00000409532 KCNJ14Q9UNX9 436 aa13.01□□□□□ -0.33
ITGA6-203ENST00000409532 CPDO75976 1380 aa13.01□□□□□ -0.33
ITGA6-203ENST00000409532 ADAMTSL3P82987 1691 aa13.01□□□□□ -0.33
ITGA6-203ENST00000409532 FOXN1O15353 648 aa13.01□□□□□ -0.33
ITGA6-203ENST00000409532 SFPQP23246 707 aaKnown RBP eCLIP13.01□□□□□ -0.33
ITGA6-203ENST00000409532 NLRP12P59046 1061 aa13.01□□□□□ -0.33
ITGA6-203ENST00000409532 SLC39A14Q15043 492 aa13.01□□□□□ -0.33
ITGA6-203ENST00000409532 NKX1-1Q15270 411 aaPredicted RBP13.01□□□□□ -0.33
ITGA6-203ENST00000409532 SHC4Q6S5L8 630 aa13.01□□□□□ -0.33
ITGA6-203ENST00000409532 DPF2Q92785 391 aa13.01□□□□□ -0.33
ITGA6-203ENST00000409532 CARD10Q9BWT7 1032 aa13.01□□□□□ -0.33
ITGA6-203ENST00000409532 MAP3K15Q6ZN16 1313 aa13.01□□□□□ -0.33
ITGA6-203ENST00000409532 PKD1L3Q7Z443 1732 aa13□□□□□ -0.33
ITGA6-203ENST00000409532 SH2B2O14492 632 aaPredicted RBP13□□□□□ -0.33
ITGA6-203ENST00000409532 NEMFO60524 1076 aa13□□□□□ -0.33
ITGA6-203ENST00000409532 MBD4O95243 580 aa13□□□□□ -0.33
ITGA6-203ENST00000409532 PDE8BO95263 885 aa13□□□□□ -0.33
ITGA6-203ENST00000409532 SERPINC1P01008 464 aa13□□□□□ -0.33
ITGA6-203ENST00000409532 CMA1P23946 247 aa13□□□□□ -0.33
ITGA6-203ENST00000409532 TRIM29Q14134 588 aa13□□□□□ -0.33
ITGA6-203ENST00000409532 CPLX2Q6PUV4 134 aaKnown RBP13□□□□□ -0.33
ITGA6-203ENST00000409532 MIGA1Q8NAN2 632 aa13□□□□□ -0.33
ITGA6-203ENST00000409532 NAPBQ9H115 298 aa13□□□□□ -0.33
ITGA6-203ENST00000409532 MYO5AQ9Y4I1 1855 aaKnown RBP13□□□□□ -0.33
ITGA6-203ENST00000409532 LAMB4A4D0S4 1761 aa13□□□□□ -0.33
ITGA6-203ENST00000409532 ZMYM6O95789 1325 aa13□□□□□ -0.33
ITGA6-203ENST00000409532 RANBP6O60518 1105 aaKnown RBP13□□□□□ -0.33
ITGA6-203ENST00000409532 FANCCQ00597 558 aa13□□□□□ -0.33
ITGA6-203ENST00000409532 SYT10Q6XYQ8 523 aa13□□□□□ -0.33
ITGA6-203ENST00000409532 FAM177A1Q8N128 213 aaPredicted RBP13□□□□□ -0.33
ITGA6-203ENST00000409532 ZSWIM5Q9P217 1185 aa13□□□□□ -0.33
ITGA6-203ENST00000409532 RIC1Q4ADV7 1423 aa13□□□□□ -0.33
ITGA6-203ENST00000409532 ZSCAN20P17040 1043 aaPredicted RBP13□□□□□ -0.33
ITGA6-203ENST00000409532 GUCY1A2P33402 732 aa13□□□□□ -0.33
ITGA6-203ENST00000409532 TPM4P67936 248 aa13□□□□□ -0.33
ITGA6-203ENST00000409532 CFAP100Q494V2 611 aa13□□□□□ -0.33
ITGA6-203ENST00000409532 E4F1Q66K89 784 aaPredicted RBP13□□□□□ -0.33
ITGA6-203ENST00000409532 HOMER1Q86YM7 354 aa13□□□□□ -0.33
ITGA6-203ENST00000409532 PDILTQ8N807 584 aa13□□□□□ -0.33
ITGA6-203ENST00000409532 SLC4A9Q96Q91 983 aa13□□□□□ -0.33
ITGA6-203ENST00000409532 BTBD18B2RXH4 712 aa12.99□□□□□ -0.33
ITGA6-203ENST00000409532 NCAPHQ15003 741 aa12.99□□□□□ -0.33
ITGA6-203ENST00000409532 ELF2Q15723 593 aa12.99□□□□□ -0.33
ITGA6-203ENST00000409532 NYAP1Q6ZVC0 841 aa12.99□□□□□ -0.33
ITGA6-203ENST00000409532 NUP133Q8WUM0 1156 aa12.99□□□□□ -0.33
ITGA6-203ENST00000409532 NUP188Q5SRE5 1749 aa12.99□□□□□ -0.33
ITGA6-203ENST00000409532 LONRF3Q496Y0 759 aa12.99□□□□□ -0.33
ITGA6-203ENST00000409532 FBXL16Q8N461 479 aa12.99□□□□□ -0.33
ITGA6-203ENST00000409532 KIF18AQ8NI77 898 aa12.99□□□□□ -0.33
ITGA6-203ENST00000409532 TMX1Q9H3N1 280 aa12.99□□□□□ -0.33
ITGA6-203ENST00000409532 SEC31BQ9NQW1 1179 aa12.99□□□□□ -0.33
ITGA6-203ENST00000409532 PRDM4Q9UKN5 801 aa12.99□□□□□ -0.33
ITGA6-203ENST00000409532 SLC12A7Q9Y666 1083 aa12.99□□□□□ -0.33
ITGA6-203ENST00000409532 COL5A2P05997 1499 aaPredicted RBP12.99□□□□□ -0.33
ITGA6-203ENST00000409532 GSDMDP57764 484 aa12.99□□□□□ -0.33
ITGA6-203ENST00000409532 GRIN1Q05586 938 aa12.99□□□□□ -0.33
ITGA6-203ENST00000409532 TRIM28Q13263 835 aaKnown RBP12.99□□□□□ -0.33
ITGA6-203ENST00000409532 STRBPQ96SI9 672 aaKnown RBP12.99□□□□□ -0.33
ITGA6-203ENST00000409532 UBASH3AP57075 661 aa12.98□□□□□ -0.33
ITGA6-203ENST00000409532 ZNF827Q17R98 1081 aa12.98□□□□□ -0.33
ITGA6-203ENST00000409532 CNNM3Q8NE01 707 aa12.98□□□□□ -0.33
ITGA6-203ENST00000409532 IGDCC4Q8TDY8 1250 aa12.98□□□□□ -0.33
ITGA6-203ENST00000409532 EPB41L4AQ9HCS5 686 aaPredicted RBP12.98□□□□□ -0.33
ITGA6-203ENST00000409532 BTG4Q9NY30 223 aa12.98□□□□□ -0.33
ITGA6-203ENST00000409532 TACC3Q9Y6A5 838 aa12.98□□□□□ -0.33
ITGA6-203ENST00000409532 hCG_1642624A0A1W2PR95 340 aa12.98□□□□□ -0.33
ITGA6-203ENST00000409532 TMEM232C9JQI7 657 aa12.98□□□□□ -0.33
ITGA6-203ENST00000409532 SMIM22K7EJ46 135 aa12.98□□□□□ -0.33
ITGA6-203ENST00000409532 IFNL3Q8IZI9 196 aa12.98□□□□□ -0.33
ITGA6-203ENST00000409532 LRRN4CLQ8ND94 238 aa12.98□□□□□ -0.33
ITGA6-203ENST00000409532 SLAIN2Q9P270 581 aa12.98□□□□□ -0.33
ITGA6-203ENST00000409532 UBN2Q6ZU65 1347 aa12.98□□□□□ -0.33
ITGA6-203ENST00000409532 STRCP1A6NGW2 1772 aa12.98□□□□□ -0.33
ITGA6-203ENST00000409532 CDKL5O76039 1030 aa12.97□□□□□ -0.33
ITGA6-203ENST00000409532 TDO2P48775 406 aa12.97□□□□□ -0.33
ITGA6-203ENST00000409532 TTF1Q15361 905 aaPredicted RBP12.97□□□□□ -0.33
ITGA6-203ENST00000409532 DZIP3Q86Y13 1208 aaKnown RBP12.97□□□□□ -0.33
ITGA6-203ENST00000409532 GRAMD1CQ8IYS0 662 aa12.97□□□□□ -0.33
ITGA6-203ENST00000409532 LY9Q9HBG7 655 aa12.97□□□□□ -0.33
ITGA6-203ENST00000409532 FAM217BQ9NTX9 383 aaPredicted RBP12.97□□□□□ -0.33
ITGA6-203ENST00000409532 FBXO3Q9UK99 471 aa12.97□□□□□ -0.33
ITGA6-203ENST00000409532 RASGRF1Q13972 1273 aa12.97□□□□□ -0.33
ITGA6-203ENST00000409532 FOXP4Q8IVH2 680 aaPredicted RBP12.97□□□□□ -0.33
ITGA6-203ENST00000409532 VGLL2Q8N8G2 317 aa12.97□□□□□ -0.33
ITGA6-203ENST00000409532 PPP1R13BQ96KQ4 1090 aa12.97□□□□□ -0.33
ITGA6-203ENST00000409532 PLA2G12BQ9BX93 195 aa12.97□□□□□ -0.33
ITGA6-203ENST00000409532 FANCLQ9NW38 375 aa12.97□□□□□ -0.33
ITGA6-203ENST00000409532 PCDHA5Q9Y5H7 936 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms