RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 CSPP1Q1MSJ5 1256 aa7.4□□□□□ -1.23
GTF3C3-202ENST00000409364 FOXD4L5Q5VV16 416 aaPredicted RBP7.4□□□□□ -1.23
GTF3C3-202ENST00000409364 ZNF467Q7Z7K2 595 aaPredicted RBP7.4□□□□□ -1.23
GTF3C3-202ENST00000409364 RALYLQ86SE5 291 aaKnown RBP7.4□□□□□ -1.23
GTF3C3-202ENST00000409364 FOXD4L4Q8WXT5 416 aaPredicted RBP7.4□□□□□ -1.23
GTF3C3-202ENST00000409364 GTF3C6Q969F1 213 aa7.4□□□□□ -1.23
GTF3C3-202ENST00000409364 LEMD3Q9Y2U8 911 aa7.4□□□□□ -1.23
GTF3C3-202ENST00000409364 ZMYM6O95789 1325 aa7.4□□□□□ -1.23
GTF3C3-202ENST00000409364 PDS5AQ29RF7 1337 aaKnown RBP7.4□□□□□ -1.23
GTF3C3-202ENST00000409364 WDR19Q8NEZ3 1342 aa7.4□□□□□ -1.23
GTF3C3-202ENST00000409364 NHSQ6T4R5 1651 aa7.39□□□□□ -1.23
GTF3C3-202ENST00000409364 COL5A3P25940 1745 aaPredicted RBP7.39□□□□□ -1.23
GTF3C3-202ENST00000409364 GOLGA6L3A6NEY3 463 aa7.39□□□□□ -1.23
GTF3C3-202ENST00000409364 DHX16O60231 1041 aaKnown RBP7.39□□□□□ -1.23
GTF3C3-202ENST00000409364 MBD3O95983 291 aa7.39□□□□□ -1.23
GTF3C3-202ENST00000409364 F13A1P00488 732 aa7.39□□□□□ -1.23
GTF3C3-202ENST00000409364 SERPINB2P05120 415 aa7.39□□□□□ -1.23
GTF3C3-202ENST00000409364 CYP7A1P22680 504 aa7.39□□□□□ -1.23
GTF3C3-202ENST00000409364 ST5P78524 1137 aa7.39□□□□□ -1.23
GTF3C3-202ENST00000409364 HMGN5P82970 282 aaKnown RBP7.39□□□□□ -1.23
GTF3C3-202ENST00000409364 ST3GAL1Q11201 340 aa7.39□□□□□ -1.23
GTF3C3-202ENST00000409364 STK3Q13188 491 aa7.39□□□□□ -1.23
GTF3C3-202ENST00000409364 GRAPQ13588 217 aa7.39□□□□□ -1.23
GTF3C3-202ENST00000409364 FLAD1Q8NFF5 587 aa7.39□□□□□ -1.23
GTF3C3-202ENST00000409364 GRAPLQ8TC17 118 aaPredicted RBP7.39□□□□□ -1.23
GTF3C3-202ENST00000409364 MTMR6Q9Y217 621 aa7.39□□□□□ -1.23
GTF3C3-202ENST00000409364 PNPLA7Q6ZV29 1317 aa7.39□□□□□ -1.23
GTF3C3-202ENST00000409364 PRC1O43663 620 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 BBOX1O75936 387 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 MBD4O95243 580 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 PDIA3P30101 505 aaKnown RBP7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 HAND2P61296 217 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 ARSIQ5FYB1 569 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 PRR5LQ6MZQ0 368 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 IFNL3Q8IZI9 196 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 PROM2Q8N271 834 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 NLGN1Q8N2Q7 840 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 CCDC24Q8N4L8 307 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 RPGRQ92834 1020 aaKnown RBP7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 KCTD12Q96CX2 325 aaKnown RBP7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 RBM17Q96I25 401 aaKnown RBP7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 LRRC2Q9BYS8 371 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 NAPBQ9H115 298 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 RAI14Q9P0K7 980 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 ANKIB1Q9P2G1 1089 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 ABCF2Q9UG63 623 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 LRP5O75197 1615 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 MYH3P11055 1940 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 A0A0G2JLW4 131 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 FSD2A1L4K1 749 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 GSG1L2A8MUP6 293 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 RXRBP28702 533 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 APOBRQ0VD83 1088 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 SCRN1Q12765 414 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 CRY2Q49AN0 593 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 SPTY2D1Q68D10 685 aaPredicted RBP7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 C15orf52Q6ZUT6 534 aaKnown RBP7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 MB21D2Q8IYB1 491 aaPredicted RBP7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 FAM184AQ8NB25 1140 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 TMEM87AQ8NBN3 555 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 SMARCC2Q8TAQ2 1214 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 TMEM87BQ96K49 555 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 KRT23Q9C075 422 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 CNNM2Q9H8M5 875 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 ARMT1Q9H993 441 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 SLC4A4Q9Y6R1 1079 aa7.38□□□□□ -1.23
GTF3C3-202ENST00000409364 BTAF1O14981 1849 aa7.37□□□□□ -1.23
GTF3C3-202ENST00000409364 MAGEB6P1A0A0J9YX57 407 aa7.37□□□□□ -1.23
GTF3C3-202ENST00000409364 KLRG2A4D1S0 409 aaPredicted RBP7.37□□□□□ -1.23
GTF3C3-202ENST00000409364 VPS37CA5D8V6 355 aaPredicted RBP7.37□□□□□ -1.23
GTF3C3-202ENST00000409364 WTIPA6NIX2 430 aaPredicted RBP7.37□□□□□ -1.23
GTF3C3-202ENST00000409364 TK2O00142 265 aa7.37□□□□□ -1.23
GTF3C3-202ENST00000409364 APBA3O96018 575 aa7.37□□□□□ -1.23
GTF3C3-202ENST00000409364 PYGBP11216 843 aa7.37□□□□□ -1.23
GTF3C3-202ENST00000409364 HOXA10P31260 410 aaPredicted RBP7.37□□□□□ -1.23
GTF3C3-202ENST00000409364 MRE11P49959 708 aa7.37□□□□□ -1.23
GTF3C3-202ENST00000409364 NAA16Q6N069 864 aaPredicted RBP7.37□□□□□ -1.23
GTF3C3-202ENST00000409364 GIMAP6Q6P9H5 292 aa7.37□□□□□ -1.23
GTF3C3-202ENST00000409364 MFSD6Q6ZSS7 791 aa7.37□□□□□ -1.23
GTF3C3-202ENST00000409364 TMC4Q7Z404 712 aa7.37□□□□□ -1.23
GTF3C3-202ENST00000409364 USP48Q86UV5 1035 aa7.37□□□□□ -1.23
GTF3C3-202ENST00000409364 TMTC2Q8N394 836 aa7.37□□□□□ -1.23
GTF3C3-202ENST00000409364 SYAP1Q96A49 352 aaPredicted RBP7.37□□□□□ -1.23
GTF3C3-202ENST00000409364 CRAMP1Q96RY5 1269 aa7.37□□□□□ -1.23
GTF3C3-202ENST00000409364 MTA3Q9BTC8 594 aa7.37□□□□□ -1.23
GTF3C3-202ENST00000409364 RNF41Q9H4P4 317 aaPredicted RBP7.37□□□□□ -1.23
GTF3C3-202ENST00000409364 ZSCAN16Q9H4T2 348 aaPredicted RBP7.37□□□□□ -1.23
GTF3C3-202ENST00000409364 TFCP2L1Q9NZI6 479 aa7.37□□□□□ -1.23
GTF3C3-202ENST00000409364 IQSEC3Q9UPP2 1182 aaPredicted RBP7.37□□□□□ -1.23
GTF3C3-202ENST00000409364 XDHP47989 1333 aa7.37□□□□□ -1.23
GTF3C3-202ENST00000409364 BRWD3Q6RI45 1802 aa7.36□□□□□ -1.23
GTF3C3-202ENST00000409364 H3BQV1 296 aa7.36□□□□□ -1.23
GTF3C3-202ENST00000409364 ATP2B4P23634 1241 aa7.36□□□□□ -1.23
GTF3C3-202ENST00000409364 TDO2P48775 406 aa7.36□□□□□ -1.23
GTF3C3-202ENST00000409364 AKNAD1Q5T1N1 836 aa7.36□□□□□ -1.23
GTF3C3-202ENST00000409364 CHST3Q7LGC8 479 aa7.36□□□□□ -1.23
GTF3C3-202ENST00000409364 RGS22Q8NE09 1264 aa7.36□□□□□ -1.23
GTF3C3-202ENST00000409364 WDR66Q8TBY9 1149 aa7.36□□□□□ -1.23
GTF3C3-202ENST00000409364 NAP1L2Q9ULW6 460 aaPredicted RBP7.36□□□□□ -1.23
GTF3C3-202ENST00000409364 ANGEL1Q9UNK9 670 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms