RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 POLA2Q14181 598 aa11.18□□□□□ -0.62
SNORD88A-201ENST00000408314 GRIK5Q16478 980 aa11.18□□□□□ -0.62
SNORD88A-201ENST00000408314 ERICH6Q7L0X2 663 aa11.18□□□□□ -0.62
SNORD88A-201ENST00000408314 CTU1Q7Z7A3 348 aaKnown RBP11.18□□□□□ -0.62
SNORD88A-201ENST00000408314 FAM151AQ8WW52 585 aa11.18□□□□□ -0.62
SNORD88A-201ENST00000408314 ZNF341Q9BYN7 854 aa11.18□□□□□ -0.62
SNORD88A-201ENST00000408314 MCOLN1Q9GZU1 580 aa11.18□□□□□ -0.62
SNORD88A-201ENST00000408314 ABCF2Q9UG63 623 aa11.18□□□□□ -0.62
SNORD88A-201ENST00000408314 GAKO14976 1311 aa11.17□□□□□ -0.62
SNORD88A-201ENST00000408314 PNMA6EA0A0J9YXQ4 647 aa11.17□□□□□ -0.62
SNORD88A-201ENST00000408314 SURF6O75683 361 aaKnown RBP11.17□□□□□ -0.62
SNORD88A-201ENST00000408314 LDHCP07864 332 aa11.17□□□□□ -0.62
SNORD88A-201ENST00000408314 GTF2A2P52657 109 aa11.17□□□□□ -0.62
SNORD88A-201ENST00000408314 DIXDC1Q155Q3 683 aa11.17□□□□□ -0.62
SNORD88A-201ENST00000408314 HSP90AB4PQ58FF6 505 aa11.17□□□□□ -0.62
SNORD88A-201ENST00000408314 CCDC158Q5M9N0 1113 aa11.17□□□□□ -0.62
SNORD88A-201ENST00000408314 IFNL1Q8IU54 200 aa11.17□□□□□ -0.62
SNORD88A-201ENST00000408314 ERC1Q8IUD2 1116 aa11.17□□□□□ -0.62
SNORD88A-201ENST00000408314 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.17□□□□□ -0.62
SNORD88A-201ENST00000408314 SSH3Q8TE77 659 aa11.17□□□□□ -0.62
SNORD88A-201ENST00000408314 OPTNQ96CV9 577 aa11.17□□□□□ -0.62
SNORD88A-201ENST00000408314 CLMNQ96JQ2 1002 aa11.17□□□□□ -0.62
SNORD88A-201ENST00000408314 WRNIP1Q96S55 665 aa11.17□□□□□ -0.62
SNORD88A-201ENST00000408314 NOL10Q9BSC4 688 aaKnown RBP11.17□□□□□ -0.62
SNORD88A-201ENST00000408314 ELP3Q9H9T3 547 aa11.17□□□□□ -0.62
SNORD88A-201ENST00000408314 TNNQ9UQP3 1299 aa11.17□□□□□ -0.62
SNORD88A-201ENST00000408314 OTOFQ9HC10 1997 aa11.16□□□□□ -0.62
SNORD88A-201ENST00000408314 GPR25O00155 361 aa11.16□□□□□ -0.62
SNORD88A-201ENST00000408314 FKTNO75072 461 aa11.16□□□□□ -0.62
SNORD88A-201ENST00000408314 ENTPD3O75355 529 aa11.16□□□□□ -0.62
SNORD88A-201ENST00000408314 ARID4AP29374 1257 aaPredicted RBP11.16□□□□□ -0.62
SNORD88A-201ENST00000408314 CACNB3P54284 484 aa11.16□□□□□ -0.62
SNORD88A-201ENST00000408314 VGLL4Q14135 290 aa11.16□□□□□ -0.62
SNORD88A-201ENST00000408314 ARHGEF6Q15052 776 aa11.16□□□□□ -0.62
SNORD88A-201ENST00000408314 CDC42EP5Q6NZY7 148 aa11.16□□□□□ -0.62
SNORD88A-201ENST00000408314 ERO1BQ86YB8 467 aa11.16□□□□□ -0.62
SNORD88A-201ENST00000408314 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.16□□□□□ -0.62
SNORD88A-201ENST00000408314 SPATA5Q8NB90 893 aa11.16□□□□□ -0.62
SNORD88A-201ENST00000408314 FAM163AQ96GL9 167 aaPredicted RBP11.16□□□□□ -0.62
SNORD88A-201ENST00000408314 ZCCHC17Q9NP64 241 aaKnown RBP11.16□□□□□ -0.62
SNORD88A-201ENST00000408314 USP40Q9NVE5 1235 aa11.16□□□□□ -0.62
SNORD88A-201ENST00000408314 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.16□□□□□ -0.62
SNORD88A-201ENST00000408314 FZD1Q9UP38 647 aa11.16□□□□□ -0.62
SNORD88A-201ENST00000408314 MROH7-TTC4A0A0A0MT08 1334 aa11.15□□□□□ -0.62
SNORD88A-201ENST00000408314 TESPA1A2RU30 521 aaPredicted RBP11.15□□□□□ -0.62
SNORD88A-201ENST00000408314 SPDYE5A6NIY4 337 aa11.15□□□□□ -0.62
SNORD88A-201ENST00000408314 CCDC85CA6NKD9 419 aa11.15□□□□□ -0.62
SNORD88A-201ENST00000408314 ZBTB7BO15156 539 aaPredicted RBP11.15□□□□□ -0.62
SNORD88A-201ENST00000408314 HMMRO75330 724 aa11.15□□□□□ -0.62
SNORD88A-201ENST00000408314 TBC1D8O95759 1140 aa11.15□□□□□ -0.62
SNORD88A-201ENST00000408314 TNNI3KQ59H18 835 aa11.15□□□□□ -0.62
SNORD88A-201ENST00000408314 TTC39AQ5SRH9 613 aa11.15□□□□□ -0.62
SNORD88A-201ENST00000408314 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.15□□□□□ -0.62
SNORD88A-201ENST00000408314 ZNF296Q8WUU4 475 aaPredicted RBP11.15□□□□□ -0.62
SNORD88A-201ENST00000408314 IDI2Q9BXS1 227 aa11.15□□□□□ -0.62
SNORD88A-201ENST00000408314 DDX19BQ9UMR2 479 aa11.15□□□□□ -0.62
SNORD88A-201ENST00000408314 NOP58Q9Y2X3 529 aaKnown RBP11.15□□□□□ -0.62
SNORD88A-201ENST00000408314 FPGT-TNNI3KV9GXZ4 949 aa11.15□□□□□ -0.62
SNORD88A-201ENST00000408314 MYH2Q9UKX2 1941 aa11.14□□□□□ -0.63
SNORD88A-201ENST00000408314 CETPP11597 493 aa11.14□□□□□ -0.63
SNORD88A-201ENST00000408314 PLCG2P16885 1265 aa11.14□□□□□ -0.63
SNORD88A-201ENST00000408314 PPATQ06203 517 aa11.14□□□□□ -0.63
SNORD88A-201ENST00000408314 PPIL2Q13356 520 aa11.14□□□□□ -0.63
SNORD88A-201ENST00000408314 SNAPC2Q13487 334 aa11.14□□□□□ -0.63
SNORD88A-201ENST00000408314 TMED8Q6PL24 325 aaPredicted RBP11.14□□□□□ -0.63
SNORD88A-201ENST00000408314 OTUD5Q96G74 571 aa11.14□□□□□ -0.63
SNORD88A-201ENST00000408314 ERO1AQ96HE7 468 aa11.14□□□□□ -0.63
SNORD88A-201ENST00000408314 ZNF512BQ96KM6 892 aaPredicted RBP11.14□□□□□ -0.63
SNORD88A-201ENST00000408314 RAI14Q9P0K7 980 aa11.14□□□□□ -0.63
SNORD88A-201ENST00000408314 HMG20BQ9P0W2 317 aa11.14□□□□□ -0.63
SNORD88A-201ENST00000408314 LRP2BPQ9P2M1 347 aa11.14□□□□□ -0.63
SNORD88A-201ENST00000408314 MAST2Q6P0Q8 1798 aa11.13□□□□□ -0.63
SNORD88A-201ENST00000408314 CCL15-CCL14A0A0B4J2E2 113 aa11.13□□□□□ -0.63
SNORD88A-201ENST00000408314 IGF2BP3O00425 579 aaKnown RBP eCLIP11.13□□□□□ -0.63
SNORD88A-201ENST00000408314 NPM3O75607 178 aaKnown RBP11.13□□□□□ -0.63
SNORD88A-201ENST00000408314 BAG3O95817 575 aa11.13□□□□□ -0.63
SNORD88A-201ENST00000408314 RLBP1P12271 317 aa11.13□□□□□ -0.63
SNORD88A-201ENST00000408314 BTDP43251 543 aa11.13□□□□□ -0.63
SNORD88A-201ENST00000408314 RGS3P49796 1198 aa11.13□□□□□ -0.63
SNORD88A-201ENST00000408314 MECOMQ03112 1051 aa11.13□□□□□ -0.63
SNORD88A-201ENST00000408314 TCP10Q12799 353 aa11.13□□□□□ -0.63
SNORD88A-201ENST00000408314 CCL15Q16663 113 aa11.13□□□□□ -0.63
SNORD88A-201ENST00000408314 NOL9Q5SY16 702 aaKnown RBP11.13□□□□□ -0.63
SNORD88A-201ENST00000408314 CERS3Q8IU89 383 aa11.13□□□□□ -0.63
SNORD88A-201ENST00000408314 ZSCAN29Q8IWY8 852 aaPredicted RBP11.13□□□□□ -0.63
SNORD88A-201ENST00000408314 CDAN1Q8IWY9 1227 aa11.13□□□□□ -0.63
SNORD88A-201ENST00000408314 C1orf115Q9H7X2 142 aa11.13□□□□□ -0.63
SNORD88A-201ENST00000408314 ZFYVE28Q9HCC9 887 aa11.13□□□□□ -0.63
SNORD88A-201ENST00000408314 RCAN3Q9UKA8 241 aa11.13□□□□□ -0.63
SNORD88A-201ENST00000408314 SNCAIPQ9Y6H5 919 aa11.13□□□□□ -0.63
SNORD88A-201ENST00000408314 AK9Q5TCS8 1911 aa11.13□□□□□ -0.63
SNORD88A-201ENST00000408314 DOCK2Q92608 1830 aa11.12□□□□□ -0.63
SNORD88A-201ENST00000408314 GPR75-ASB3A0A0A6YYF3 556 aa11.12□□□□□ -0.63
SNORD88A-201ENST00000408314 NFIAQ12857 509 aa11.12□□□□□ -0.63
SNORD88A-201ENST00000408314 TAF1CQ15572 869 aaPredicted RBP11.12□□□□□ -0.63
SNORD88A-201ENST00000408314 CEP85Q6P2H3 762 aa11.12□□□□□ -0.63
SNORD88A-201ENST00000408314 FBXO46Q6PJ61 603 aaPredicted RBP11.12□□□□□ -0.63
SNORD88A-201ENST00000408314 RPAP2Q8IXW5 612 aaPredicted RBP11.12□□□□□ -0.63
SNORD88A-201ENST00000408314 PICK1Q9NRD5 415 aa11.12□□□□□ -0.63
SNORD88A-201ENST00000408314 FAM198AQ9UFP1 575 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms