RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 FBXO33Q7Z6M2 555 aa10.17□□□□□ -0.78
GPC3-203ENST00000406757 DPF2Q92785 391 aa10.17□□□□□ -0.78
GPC3-203ENST00000406757 RILPL2Q969X0 211 aa10.17□□□□□ -0.78
GPC3-203ENST00000406757 GPATCH3Q96I76 525 aa10.17□□□□□ -0.78
GPC3-203ENST00000406757 ZC3H12CQ9C0D7 883 aaKnown RBP10.17□□□□□ -0.78
GPC3-203ENST00000406757 MCOLN1Q9GZU1 580 aa10.17□□□□□ -0.78
GPC3-203ENST00000406757 OSBPL3Q9H4L5 887 aa10.17□□□□□ -0.78
GPC3-203ENST00000406757 ANTXR1Q9H6X2 564 aa10.17□□□□□ -0.78
GPC3-203ENST00000406757 TTC41PQ6P2S7 1318 aa10.16□□□□□ -0.78
GPC3-203ENST00000406757 G3V3G9 751 aa10.16□□□□□ -0.78
GPC3-203ENST00000406757 FRAT2O75474 233 aaPredicted RBP10.16□□□□□ -0.78
GPC3-203ENST00000406757 ZAP70P43403 619 aa10.16□□□□□ -0.78
GPC3-203ENST00000406757 MLLT1Q03111 559 aaPredicted RBP10.16□□□□□ -0.78
GPC3-203ENST00000406757 NOGQ13253 232 aa10.16□□□□□ -0.78
GPC3-203ENST00000406757 DCAF8Q5TAQ9 597 aa10.16□□□□□ -0.78
GPC3-203ENST00000406757 TBC1D9Q6ZT07 1266 aa10.16□□□□□ -0.78
GPC3-203ENST00000406757 FBXW7Q969H0 707 aa10.16□□□□□ -0.78
GPC3-203ENST00000406757 DCPSQ96C86 337 aaKnown RBP10.16□□□□□ -0.78
GPC3-203ENST00000406757 EYA3Q99504 573 aa10.16□□□□□ -0.78
GPC3-203ENST00000406757 CD209Q9NNX6 404 aa10.16□□□□□ -0.78
GPC3-203ENST00000406757 HMG20BQ9P0W2 317 aa10.16□□□□□ -0.78
GPC3-203ENST00000406757 ASTN2O75129 1339 aaPredicted RBP10.15□□□□□ -0.78
GPC3-203ENST00000406757 FAM155AB1AL88 458 aaPredicted RBP10.15□□□□□ -0.78
GPC3-203ENST00000406757 GOLIM4O00461 696 aa10.15□□□□□ -0.78
GPC3-203ENST00000406757 ERC2O15083 957 aa10.15□□□□□ -0.78
GPC3-203ENST00000406757 GLRX3O76003 335 aaKnown RBP10.15□□□□□ -0.78
GPC3-203ENST00000406757 CHGBP05060 677 aa10.15□□□□□ -0.78
GPC3-203ENST00000406757 UQCRFS1P1P0C7P4 283 aa10.15□□□□□ -0.78
GPC3-203ENST00000406757 SDSP20132 328 aa10.15□□□□□ -0.78
GPC3-203ENST00000406757 RPS12P25398 132 aaKnown RBP10.15□□□□□ -0.78
GPC3-203ENST00000406757 ARID4AP29374 1257 aaPredicted RBP10.15□□□□□ -0.78
GPC3-203ENST00000406757 DGKZQ13574 1117 aa10.15□□□□□ -0.78
GPC3-203ENST00000406757 RASGRF1Q13972 1273 aa10.15□□□□□ -0.78
GPC3-203ENST00000406757 KIF4BQ2VIQ3 1234 aa10.15□□□□□ -0.78
GPC3-203ENST00000406757 SLFNL1Q499Z3 407 aa10.15□□□□□ -0.78
GPC3-203ENST00000406757 RGMBQ6NW40 437 aa10.15□□□□□ -0.78
GPC3-203ENST00000406757 ZNF804AQ7Z570 1209 aa10.15□□□□□ -0.78
GPC3-203ENST00000406757 C2orf69Q8N8R5 385 aa10.15□□□□□ -0.78
GPC3-203ENST00000406757 HAUS7Q99871 368 aa10.15□□□□□ -0.78
GPC3-203ENST00000406757 MXD3Q9BW11 206 aa10.15□□□□□ -0.78
GPC3-203ENST00000406757 GBA2Q9HCG7 927 aaPredicted RBP10.15□□□□□ -0.78
GPC3-203ENST00000406757 MED23Q9ULK4 1368 aa10.14□□□□□ -0.79
GPC3-203ENST00000406757 ARAP2Q8WZ64 1704 aa10.14□□□□□ -0.79
GPC3-203ENST00000406757 CYP2E1P05181 493 aaPredicted RBP10.14□□□□□ -0.79
GPC3-203ENST00000406757 ZNF157P51786 506 aaPredicted RBP10.14□□□□□ -0.79
GPC3-203ENST00000406757 C15orf52Q6ZUT6 534 aaKnown RBP10.14□□□□□ -0.79
GPC3-203ENST00000406757 IFNLR1Q8IU57 520 aaPredicted RBP10.14□□□□□ -0.79
GPC3-203ENST00000406757 SPATA5Q8NB90 893 aa10.14□□□□□ -0.79
GPC3-203ENST00000406757 TDRD7Q8NHU6 1098 aaKnown RBP10.14□□□□□ -0.79
GPC3-203ENST00000406757 PIH1D3Q9NQM4 214 aaKnown RBP10.14□□□□□ -0.79
GPC3-203ENST00000406757 GNL3LQ9NVN8 582 aaKnown RBP10.14□□□□□ -0.79
GPC3-203ENST00000406757 GGA3Q9NZ52 723 aa10.14□□□□□ -0.79
GPC3-203ENST00000406757 AOX1Q06278 1338 aa10.13□□□□□ -0.79
GPC3-203ENST00000406757 COL1A1P02452 1464 aaPredicted RBP10.13□□□□□ -0.79
GPC3-203ENST00000406757 VIL1P09327 827 aaKnown RBP10.13□□□□□ -0.79
GPC3-203ENST00000406757 RGS19P49795 217 aa10.13□□□□□ -0.79
GPC3-203ENST00000406757 GTF2IP78347 998 aa10.13□□□□□ -0.79
GPC3-203ENST00000406757 KIF23Q02241 960 aaPredicted RBP10.13□□□□□ -0.79
GPC3-203ENST00000406757 GRIK5Q16478 980 aa10.13□□□□□ -0.79
GPC3-203ENST00000406757 SULF1Q8IWU6 871 aa10.13□□□□□ -0.79
GPC3-203ENST00000406757 COA1Q9GZY4 146 aa10.13□□□□□ -0.79
GPC3-203ENST00000406757 PAG1Q9NWQ8 432 aa10.13□□□□□ -0.79
GPC3-203ENST00000406757 IL1R1P14778 569 aa10.12□□□□□ -0.79
GPC3-203ENST00000406757 IFNL1Q8IU54 200 aa10.12□□□□□ -0.79
GPC3-203ENST00000406757 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.12□□□□□ -0.79
GPC3-203ENST00000406757 CCDC102AQ96A19 550 aa10.12□□□□□ -0.79
GPC3-203ENST00000406757 CDCA5Q96FF9 252 aa10.12□□□□□ -0.79
GPC3-203ENST00000406757 ZNF512BQ96KM6 892 aaPredicted RBP10.12□□□□□ -0.79
GPC3-203ENST00000406757 FSD1Q9BTV5 496 aa10.12□□□□□ -0.79
GPC3-203ENST00000406757 ABCF2Q9UG63 623 aa10.12□□□□□ -0.79
GPC3-203ENST00000406757 DENND2AQ9ULE3 1009 aa10.12□□□□□ -0.79
GPC3-203ENST00000406757 CASP8AP2Q9UKL3 1982 aa10.12□□□□□ -0.79
GPC3-203ENST00000406757 AKAP11Q9UKA4 1901 aa10.11□□□□□ -0.79
GPC3-203ENST00000406757 F8W031 263 aaPredicted RBP10.11□□□□□ -0.79
GPC3-203ENST00000406757 TRPA1O75762 1119 aa10.11□□□□□ -0.79
GPC3-203ENST00000406757 IDH1O75874 414 aaKnown RBP10.11□□□□□ -0.79
GPC3-203ENST00000406757 BMP2KLQ5H9B9 411 aa10.11□□□□□ -0.79
GPC3-203ENST00000406757 ANGEL2Q5VTE6 544 aaKnown RBP10.11□□□□□ -0.79
GPC3-203ENST00000406757 RSBN1LQ6PCB5 846 aaPredicted RBP10.11□□□□□ -0.79
GPC3-203ENST00000406757 EVI5LQ96CN4 794 aa10.11□□□□□ -0.79
GPC3-203ENST00000406757 RNF186Q9NXI6 227 aa10.11□□□□□ -0.79
GPC3-203ENST00000406757 SCAF8Q9UPN6 1271 aaKnown RBP10.11□□□□□ -0.79
GPC3-203ENST00000406757 SCN9AQ15858 1988 aa10.11□□□□□ -0.79
GPC3-203ENST00000406757 SLC34A2O95436 690 aa10.1□□□□□ -0.79
GPC3-203ENST00000406757 SLC10A3P09131 477 aa10.1□□□□□ -0.79
GPC3-203ENST00000406757 ZNF280AP59817 542 aaPredicted RBP10.1□□□□□ -0.79
GPC3-203ENST00000406757 TTLL5Q6EMB2 1281 aa10.1□□□□□ -0.79
GPC3-203ENST00000406757 AGBL3Q8NEM8 1001 aa10.1□□□□□ -0.79
GPC3-203ENST00000406757 CSRNP1Q96S65 589 aa10.1□□□□□ -0.79
GPC3-203ENST00000406757 MYOZ2Q9NPC6 264 aa10.1□□□□□ -0.79
GPC3-203ENST00000406757 SAGE1Q9NXZ1 904 aa10.1□□□□□ -0.79
GPC3-203ENST00000406757 RAI14Q9P0K7 980 aa10.1□□□□□ -0.79
GPC3-203ENST00000406757 LRP2BPQ9P2M1 347 aa10.1□□□□□ -0.79
GPC3-203ENST00000406757 MYO5AQ9Y4I1 1855 aaKnown RBP10.1□□□□□ -0.79
GPC3-203ENST00000406757 POLR2AP24928 1970 aaKnown RBP10.09□□□□□ -0.79
GPC3-203ENST00000406757 SEMA3EO15041 775 aa10.09□□□□□ -0.79
GPC3-203ENST00000406757 USP17L8P0C7I0 530 aa10.09□□□□□ -0.79
GPC3-203ENST00000406757 PRDX5P30044 214 aa10.09□□□□□ -0.79
GPC3-203ENST00000406757 NMIQ13287 307 aaPredicted RBP10.09□□□□□ -0.79
GPC3-203ENST00000406757 MOB2Q70IA6 237 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms