RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 FAM117BQ6P1L5 589 aa6.99□□□□□ -1.29
HMGB3P18-201ENST00000406327 LRP10Q7Z4F1 713 aa6.99□□□□□ -1.29
HMGB3P18-201ENST00000406327 VN1R5Q7Z5H4 357 aa6.99□□□□□ -1.29
HMGB3P18-201ENST00000406327 ELOA3Q8NG57 546 aa6.99□□□□□ -1.29
HMGB3P18-201ENST00000406327 WNT8BQ93098 351 aa6.99□□□□□ -1.29
HMGB3P18-201ENST00000406327 ANAPC16Q96DE5 110 aa6.99□□□□□ -1.29
HMGB3P18-201ENST00000406327 FERD3LQ96RJ6 166 aa6.99□□□□□ -1.29
HMGB3P18-201ENST00000406327 MBIPQ9NS73 344 aa6.99□□□□□ -1.29
HMGB3P18-201ENST00000406327 C2CD2LO14523 706 aa6.98□□□□□ -1.29
HMGB3P18-201ENST00000406327 CILPO75339 1184 aa6.98□□□□□ -1.29
HMGB3P18-201ENST00000406327 RGS9O75916 674 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P18-201ENST00000406327 ESRRAP11474 423 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P18-201ENST00000406327 BMP6P22004 513 aa6.98□□□□□ -1.29
HMGB3P18-201ENST00000406327 MCM4P33991 863 aa6.98□□□□□ -1.29
HMGB3P18-201ENST00000406327 ZNF157P51786 506 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P18-201ENST00000406327 SERINC3Q13530 473 aa6.98□□□□□ -1.29
HMGB3P18-201ENST00000406327 RAB33AQ14088 237 aa6.98□□□□□ -1.29
HMGB3P18-201ENST00000406327 PSAPL1Q6NUJ1 521 aa6.98□□□□□ -1.29
HMGB3P18-201ENST00000406327 BNC2Q6ZN30 1099 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P18-201ENST00000406327 REC114Q7Z4M0 266 aa6.98□□□□□ -1.29
HMGB3P18-201ENST00000406327 BEND7Q8N7W2 519 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P18-201ENST00000406327 GOLGA6L1Q8N7Z2 621 aa6.98□□□□□ -1.29
HMGB3P18-201ENST00000406327 JARID2Q92833 1246 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P18-201ENST00000406327 LPIN3Q9BQK8 851 aa6.98□□□□□ -1.29
HMGB3P18-201ENST00000406327 LACRTQ9GZZ8 138 aa6.98□□□□□ -1.29
HMGB3P18-201ENST00000406327 GDF2Q9UK05 429 aaPredicted RBP6.98□□□□□ -1.29
HMGB3P18-201ENST00000406327 NAGPAQ9UK23 515 aa6.98□□□□□ -1.29
HMGB3P18-201ENST00000406327 TRIM33Q9UPN9 1127 aa6.98□□□□□ -1.29
HMGB3P18-201ENST00000406327 MRVI1Q9Y6F6 885 aa6.98□□□□□ -1.29
HMGB3P18-201ENST00000406327 CNTNAP5Q8WYK1 1306 aa6.98□□□□□ -1.29
HMGB3P18-201ENST00000406327 FAM221AA4D161 298 aa6.97□□□□□ -1.29
HMGB3P18-201ENST00000406327 TLR3O15455 904 aaKnown RBP6.97□□□□□ -1.29
HMGB3P18-201ENST00000406327 TRIM37O94972 964 aa6.97□□□□□ -1.29
HMGB3P18-201ENST00000406327 ETFBP38117 255 aa6.97□□□□□ -1.29
HMGB3P18-201ENST00000406327 CRKP46108 304 aa6.97□□□□□ -1.29
HMGB3P18-201ENST00000406327 PIP4K2BP78356 416 aa6.97□□□□□ -1.29
HMGB3P18-201ENST00000406327 ZNF423Q2M1K9 1284 aa6.97□□□□□ -1.29
HMGB3P18-201ENST00000406327 HP1BP3Q5SSJ5 553 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P18-201ENST00000406327 SDE2Q6IQ49 451 aa6.97□□□□□ -1.29
HMGB3P18-201ENST00000406327 ZNF746Q6NUN9 644 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P18-201ENST00000406327 PODNQ7Z5L7 613 aa6.97□□□□□ -1.29
HMGB3P18-201ENST00000406327 Q8N3U1 123 aa6.97□□□□□ -1.29
HMGB3P18-201ENST00000406327 PIF1Q9H611 641 aa6.97□□□□□ -1.29
HMGB3P18-201ENST00000406327 CDK11AQ9UQ88 783 aaPredicted RBP6.97□□□□□ -1.29
HMGB3P18-201ENST00000406327 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P18-201ENST00000406327 CYP11A1P05108 521 aa6.96□□□□□ -1.3
HMGB3P18-201ENST00000406327 RPL6Q02878 288 aaKnown RBP6.96□□□□□ -1.3
HMGB3P18-201ENST00000406327 SEPT6Q14141 434 aa6.96□□□□□ -1.3
HMGB3P18-201ENST00000406327 MLECQ14165 292 aa6.96□□□□□ -1.3
HMGB3P18-201ENST00000406327 FBXW10Q5XX13 1052 aa6.96□□□□□ -1.3
HMGB3P18-201ENST00000406327 GDF6Q6KF10 455 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P18-201ENST00000406327 SRPK1Q96SB4 655 aaKnown RBP6.96□□□□□ -1.3
HMGB3P18-201ENST00000406327 KRTAP9-2Q9BYQ4 174 aa6.96□□□□□ -1.3
HMGB3P18-201ENST00000406327 TBX22Q9Y458 520 aa6.96□□□□□ -1.3
HMGB3P18-201ENST00000406327 PCDHB5Q9Y5E4 795 aa6.96□□□□□ -1.3
HMGB3P18-201ENST00000406327 ANKRD62A6NC57 917 aa6.95□□□□□ -1.3
HMGB3P18-201ENST00000406327 NEURL1BA8MQ27 555 aa6.95□□□□□ -1.3
HMGB3P18-201ENST00000406327 KLF4O43474 513 aa6.95□□□□□ -1.3
HMGB3P18-201ENST00000406327 GSTP1P09211 210 aaKnown RBP6.95□□□□□ -1.3
HMGB3P18-201ENST00000406327 SLCO4C1Q6ZQN7 724 aa6.95□□□□□ -1.3
HMGB3P18-201ENST00000406327 GAL3ST3Q96A11 431 aa6.95□□□□□ -1.3
HMGB3P18-201ENST00000406327 SHDQ96IW2 340 aa6.95□□□□□ -1.3
HMGB3P18-201ENST00000406327 MDFIQ99750 246 aa6.95□□□□□ -1.3
HMGB3P18-201ENST00000406327 OSGEPQ9NPF4 335 aa6.95□□□□□ -1.3
HMGB3P18-201ENST00000406327 ZNRF3Q9ULT6 936 aa6.95□□□□□ -1.3
HMGB3P18-201ENST00000406327 PPT2Q9UMR5 302 aa6.95□□□□□ -1.3
HMGB3P18-201ENST00000406327 PPME1Q9Y570 386 aa6.95□□□□□ -1.3
HMGB3P18-201ENST00000406327 EPHA1P21709 976 aa6.94□□□□□ -1.3
HMGB3P18-201ENST00000406327 GIPRP48546 466 aa6.94□□□□□ -1.3
HMGB3P18-201ENST00000406327 ZNF252P-AS1Q0IIN9 211 aa6.94□□□□□ -1.3
HMGB3P18-201ENST00000406327 C19orf57Q0VDD7 668 aa6.94□□□□□ -1.3
HMGB3P18-201ENST00000406327 LRRFIP1Q32MZ4 808 aaKnown RBP6.94□□□□□ -1.3
HMGB3P18-201ENST00000406327 FCHSD1Q86WN1 690 aa6.94□□□□□ -1.3
HMGB3P18-201ENST00000406327 IL22RA1Q8N6P7 574 aa6.94□□□□□ -1.3
HMGB3P18-201ENST00000406327 RBBP8NLQ8NC74 664 aaPredicted RBP6.94□□□□□ -1.3
HMGB3P18-201ENST00000406327 DCAF11Q8TEB1 546 aa6.94□□□□□ -1.3
HMGB3P18-201ENST00000406327 HNRNPLLQ8WVV9 542 aaKnown RBP6.94□□□□□ -1.3
HMGB3P18-201ENST00000406327 ACSBG1Q96GR2 724 aa6.94□□□□□ -1.3
HMGB3P18-201ENST00000406327 CORO1BQ9BR76 489 aa6.94□□□□□ -1.3
HMGB3P18-201ENST00000406327 JPH1Q9HDC5 661 aaPredicted RBP6.94□□□□□ -1.3
HMGB3P18-201ENST00000406327 KRT82Q9NSB4 513 aa6.94□□□□□ -1.3
HMGB3P18-201ENST00000406327 ACTR10Q9NZ32 417 aa6.94□□□□□ -1.3
HMGB3P18-201ENST00000406327 KLF15Q9UIH9 416 aa6.94□□□□□ -1.3
HMGB3P18-201ENST00000406327 GGA1Q9UJY5 639 aa6.94□□□□□ -1.3
HMGB3P18-201ENST00000406327 SMAD7O15105 426 aaKnown RBP6.93□□□□□ -1.3
HMGB3P18-201ENST00000406327 GSTM4Q03013 218 aa6.93□□□□□ -1.3
HMGB3P18-201ENST00000406327 GAS6Q14393 721 aa6.93□□□□□ -1.3
HMGB3P18-201ENST00000406327 MAP1SQ66K74 1059 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P18-201ENST00000406327 CCDC81Q6ZN84 652 aa6.93□□□□□ -1.3
HMGB3P18-201ENST00000406327 PDZD3Q86UT5 571 aa6.93□□□□□ -1.3
HMGB3P18-201ENST00000406327 MAP4K3Q8IVH8 894 aa6.93□□□□□ -1.3
HMGB3P18-201ENST00000406327 FBXO27Q8NI29 283 aa6.93□□□□□ -1.3
HMGB3P18-201ENST00000406327 KCNB2Q92953 911 aa6.93□□□□□ -1.3
HMGB3P18-201ENST00000406327 DEPDC7Q96QD5 511 aa6.93□□□□□ -1.3
HMGB3P18-201ENST00000406327 EHMT1Q9H9B1 1298 aa6.93□□□□□ -1.3
HMGB3P18-201ENST00000406327 BRMS1Q9HCU9 246 aa6.93□□□□□ -1.3
HMGB3P18-201ENST00000406327 SH2B1Q9NRF2 756 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P18-201ENST00000406327 KRTAP9-6A0A140TA67 174 aa6.92□□□□□ -1.3
HMGB3P18-201ENST00000406327 SOX1O00570 391 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P18-201ENST00000406327 LILRB5O75023 590 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms