RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 CCDC102BQ68D86 513 aa11.48□□□□□ -0.57
MSH2-202ENST00000406134 SHC4Q6S5L8 630 aa11.48□□□□□ -0.57
MSH2-202ENST00000406134 KAT6BQ8WYB5 2073 aa11.48□□□□□ -0.57
MSH2-202ENST00000406134 CCDC94Q9BW85 323 aaPredicted RBP11.48□□□□□ -0.57
MSH2-202ENST00000406134 ZNF532Q9HCE3 1301 aa11.48□□□□□ -0.57
MSH2-202ENST00000406134 ORC3Q9UBD5 711 aaPredicted RBP11.48□□□□□ -0.57
MSH2-202ENST00000406134 CTNNA3Q9UI47 895 aa11.48□□□□□ -0.57
MSH2-202ENST00000406134 APOA5Q6Q788 366 aa11.48□□□□□ -0.57
MSH2-202ENST00000406134 ZNF34Q8IZ26 560 aa11.48□□□□□ -0.57
MSH2-202ENST00000406134 C8orf76Q96K31 380 aa11.48□□□□□ -0.57
MSH2-202ENST00000406134 STRBPQ96SI9 672 aaKnown RBP11.48□□□□□ -0.57
MSH2-202ENST00000406134 PFKFB1P16118 471 aa11.47□□□□□ -0.57
MSH2-202ENST00000406134 PDE6AP16499 860 aa11.47□□□□□ -0.57
MSH2-202ENST00000406134 UBE3CQ15386 1083 aa11.47□□□□□ -0.57
MSH2-202ENST00000406134 ZNF213O14771 459 aa11.47□□□□□ -0.57
MSH2-202ENST00000406134 METTL24Q5JXM2 366 aa11.47□□□□□ -0.57
MSH2-202ENST00000406134 SLC9C2Q5TAH2 1124 aa11.47□□□□□ -0.57
MSH2-202ENST00000406134 ARMCX5Q6P1M9 558 aa11.47□□□□□ -0.57
MSH2-202ENST00000406134 OSBPL5Q9H0X9 879 aaPredicted RBP11.47□□□□□ -0.57
MSH2-202ENST00000406134 PRDM4Q9UKN5 801 aa11.47□□□□□ -0.57
MSH2-202ENST00000406134 SPTLC2O15270 562 aa11.47□□□□□ -0.57
MSH2-202ENST00000406134 ANO1Q5XXA6 986 aa11.47□□□□□ -0.57
MSH2-202ENST00000406134 BRAPQ7Z569 592 aa11.47□□□□□ -0.57
MSH2-202ENST00000406134 PHKBQ93100 1093 aa11.47□□□□□ -0.57
MSH2-202ENST00000406134 ANGEL1Q9UNK9 670 aaKnown RBP11.47□□□□□ -0.57
MSH2-202ENST00000406134 FANCGO15287 622 aa11.46□□□□□ -0.57
MSH2-202ENST00000406134 KINO60870 393 aaKnown RBP11.46□□□□□ -0.57
MSH2-202ENST00000406134 ZNF202O95125 648 aa11.46□□□□□ -0.57
MSH2-202ENST00000406134 BMP6P22004 513 aa11.46□□□□□ -0.57
MSH2-202ENST00000406134 U2AF2P26368 475 aaKnown RBP eCLIP11.46□□□□□ -0.57
MSH2-202ENST00000406134 LDHAL6AQ6ZMR3 332 aa11.46□□□□□ -0.57
MSH2-202ENST00000406134 KIF6Q6ZMV9 814 aa11.46□□□□□ -0.57
MSH2-202ENST00000406134 CCDC73Q6ZRK6 1079 aa11.46□□□□□ -0.57
MSH2-202ENST00000406134 FOXP4Q8IVH2 680 aaPredicted RBP11.46□□□□□ -0.57
MSH2-202ENST00000406134 ANO10Q9NW15 660 aa11.46□□□□□ -0.57
MSH2-202ENST00000406134 TUBE1Q9UJT0 475 aa11.46□□□□□ -0.57
MSH2-202ENST00000406134 NAP1L2Q9ULW6 460 aaPredicted RBP11.46□□□□□ -0.57
MSH2-202ENST00000406134 ZNF330Q9Y3S2 320 aaPredicted RBP11.46□□□□□ -0.57
MSH2-202ENST00000406134 COL24A1Q17RW2 1714 aa11.46□□□□□ -0.57
MSH2-202ENST00000406134 B4E1Z4 1266 aa11.46□□□□□ -0.58
MSH2-202ENST00000406134 SMIM22K7EJ46 135 aa11.46□□□□□ -0.58
MSH2-202ENST00000406134 IRS4O14654 1257 aaPredicted RBP11.46□□□□□ -0.58
MSH2-202ENST00000406134 SLC39A14Q15043 492 aa11.46□□□□□ -0.58
MSH2-202ENST00000406134 MTERF4Q7Z6M4 381 aaKnown RBP11.46□□□□□ -0.58
MSH2-202ENST00000406134 SGMS1Q86VZ5 419 aa11.46□□□□□ -0.58
MSH2-202ENST00000406134 KCNG4Q8TDN1 519 aa11.46□□□□□ -0.58
MSH2-202ENST00000406134 MAST2Q6P0Q8 1798 aa11.46□□□□□ -0.58
MSH2-202ENST00000406134 CDK5RAP2Q96SN8 1893 aa11.46□□□□□ -0.58
MSH2-202ENST00000406134 GUCY1A2P33402 732 aa11.46□□□□□ -0.58
MSH2-202ENST00000406134 VPS37DQ86XT2 251 aa11.46□□□□□ -0.58
MSH2-202ENST00000406134 ARID3AQ99856 593 aa11.46□□□□□ -0.58
MSH2-202ENST00000406134 CMA1P23946 247 aa11.45□□□□□ -0.58
MSH2-202ENST00000406134 TOB1P50616 345 aaPredicted RBP11.45□□□□□ -0.58
MSH2-202ENST00000406134 RASGRF1Q13972 1273 aa11.45□□□□□ -0.58
MSH2-202ENST00000406134 MYL10Q9BUA6 226 aa11.45□□□□□ -0.58
MSH2-202ENST00000406134 AHDC1Q5TGY3 1603 aaPredicted RBP11.45□□□□□ -0.58
MSH2-202ENST00000406134 CCDC69A6NI79 296 aa11.45□□□□□ -0.58
MSH2-202ENST00000406134 SMTNL1A8MU46 457 aa11.45□□□□□ -0.58
MSH2-202ENST00000406134 ALX1Q15699 326 aa11.45□□□□□ -0.58
MSH2-202ENST00000406134 E4F1Q66K89 784 aaPredicted RBP11.45□□□□□ -0.58
MSH2-202ENST00000406134 MDM2Q00987 491 aaPredicted RBP11.45□□□□□ -0.58
MSH2-202ENST00000406134 SF3A1Q15459 793 aaKnown RBP11.45□□□□□ -0.58
MSH2-202ENST00000406134 KRT40Q6A162 431 aa11.45□□□□□ -0.58
MSH2-202ENST00000406134 INTS5Q6P9B9 1019 aaKnown RBP11.45□□□□□ -0.58
MSH2-202ENST00000406134 METTL16Q86W50 562 aaKnown RBP11.45□□□□□ -0.58
MSH2-202ENST00000406134 FBXW7Q969H0 707 aa11.45□□□□□ -0.58
MSH2-202ENST00000406134 XPO4Q9C0E2 1151 aaKnown RBP11.45□□□□□ -0.58
MSH2-202ENST00000406134 GSG1L2A8MUP6 293 aa11.44□□□□□ -0.58
MSH2-202ENST00000406134 TNNT1P13805 278 aa11.44□□□□□ -0.58
MSH2-202ENST00000406134 NLRP12P59046 1061 aa11.44□□□□□ -0.58
MSH2-202ENST00000406134 GRIN1Q05586 938 aa11.44□□□□□ -0.58
MSH2-202ENST00000406134 ADGRA1Q86SQ6 560 aa11.44□□□□□ -0.58
MSH2-202ENST00000406134 TEX13AQ9BXU3 409 aaPredicted RBP11.44□□□□□ -0.58
MSH2-202ENST00000406134 ZSWIM5Q9P217 1185 aa11.44□□□□□ -0.58
MSH2-202ENST00000406134 ANKRD18BA2A2Z9 1011 aa11.44□□□□□ -0.58
MSH2-202ENST00000406134 PDE8AO60658 829 aa11.44□□□□□ -0.58
MSH2-202ENST00000406134 MARCKSP29966 332 aaPredicted RBP11.44□□□□□ -0.58
MSH2-202ENST00000406134 CTDSPL2Q05D32 466 aa11.44□□□□□ -0.58
MSH2-202ENST00000406134 GORABQ5T7V8 394 aa11.44□□□□□ -0.58
MSH2-202ENST00000406134 RESP18Q5W5W9 173 aa11.44□□□□□ -0.58
MSH2-202ENST00000406134 CCAR2Q8N163 923 aaKnown RBP11.44□□□□□ -0.58
MSH2-202ENST00000406134 STK11IPQ8N1F8 1099 aa11.44□□□□□ -0.58
MSH2-202ENST00000406134 HELBQ8NG08 1087 aaPredicted RBP11.44□□□□□ -0.58
MSH2-202ENST00000406134 DPF2Q92785 391 aa11.44□□□□□ -0.58
MSH2-202ENST00000406134 INTS13Q9NVM9 706 aa11.44□□□□□ -0.58
MSH2-202ENST00000406134 BTG4Q9NY30 223 aa11.44□□□□□ -0.58
MSH2-202ENST00000406134 ATP1A3P13637 1013 aa11.43□□□□□ -0.58
MSH2-202ENST00000406134 SUSD4Q5VX71 490 aa11.43□□□□□ -0.58
MSH2-202ENST00000406134 DRC7Q8IY82 874 aa11.43□□□□□ -0.58
MSH2-202ENST00000406134 CLIC6Q96NY7 704 aa11.43□□□□□ -0.58
MSH2-202ENST00000406134 WTIPA6NIX2 430 aaPredicted RBP11.43□□□□□ -0.58
MSH2-202ENST00000406134 ERVV-1B6SEH8 477 aa11.43□□□□□ -0.58
MSH2-202ENST00000406134 PRKAB2O43741 272 aa11.43□□□□□ -0.58
MSH2-202ENST00000406134 PPP6R2O75170 966 aa11.43□□□□□ -0.58
MSH2-202ENST00000406134 ZSCAN20P17040 1043 aaPredicted RBP11.43□□□□□ -0.58
MSH2-202ENST00000406134 STK38Q15208 465 aa11.43□□□□□ -0.58
MSH2-202ENST00000406134 SYCP1Q15431 976 aa11.43□□□□□ -0.58
MSH2-202ENST00000406134 MED15Q96RN5 788 aa11.43□□□□□ -0.58
MSH2-202ENST00000406134 ALG1Q9BT22 464 aa11.43□□□□□ -0.58
MSH2-202ENST00000406134 SEC31BQ9NQW1 1179 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms