RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 KNDC1Q76NI1 1749 aa15.91■□□□□ 0.14
DUSP28-202ENST00000405954 CCDC189A1A4V9 331 aa15.91■□□□□ 0.14
DUSP28-202ENST00000405954 LRRIQ3A6PVS8 624 aaPredicted RBP15.91■□□□□ 0.14
DUSP28-202ENST00000405954 EIF2S2P20042 333 aaKnown RBP15.91■□□□□ 0.14
DUSP28-202ENST00000405954 GPTP24298 496 aa15.91■□□□□ 0.14
DUSP28-202ENST00000405954 PDCLQ13371 301 aa15.91■□□□□ 0.14
DUSP28-202ENST00000405954 SND1Q7KZF4 910 aaKnown RBP eCLIP15.91■□□□□ 0.14
DUSP28-202ENST00000405954 RSRC2Q7L4I2 434 aaKnown RBP15.91■□□□□ 0.14
DUSP28-202ENST00000405954 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.91■□□□□ 0.14
DUSP28-202ENST00000405954 ZNF202O95125 648 aa15.91■□□□□ 0.14
DUSP28-202ENST00000405954 CPP00450 1065 aa15.91■□□□□ 0.14
DUSP28-202ENST00000405954 ANXA1P04083 346 aa15.91■□□□□ 0.14
DUSP28-202ENST00000405954 GSPT2Q8IYD1 628 aaKnown RBP15.91■□□□□ 0.14
DUSP28-202ENST00000405954 ZNF513Q8N8E2 541 aaPredicted RBP15.91■□□□□ 0.14
DUSP28-202ENST00000405954 TTC21AQ8NDW8 1320 aa15.91■□□□□ 0.14
DUSP28-202ENST00000405954 PNPLA6Q8IY17 1366 aa15.9■□□□□ 0.14
DUSP28-202ENST00000405954 TTC21BQ7Z4L5 1316 aa15.9■□□□□ 0.14
DUSP28-202ENST00000405954 AP1G2O75843 785 aa15.9■□□□□ 0.14
DUSP28-202ENST00000405954 TFRCP02786 760 aaKnown RBP15.9■□□□□ 0.14
DUSP28-202ENST00000405954 NDUFA8P51970 172 aa15.9■□□□□ 0.14
DUSP28-202ENST00000405954 PPFIA1Q13136 1202 aa15.9■□□□□ 0.14
DUSP28-202ENST00000405954 SMARCC2Q8TAQ2 1214 aa15.9■□□□□ 0.14
DUSP28-202ENST00000405954 SAAL1Q96ER3 474 aa15.9■□□□□ 0.14
DUSP28-202ENST00000405954 ZSWIM6Q9HCJ5 1215 aa15.9■□□□□ 0.14
DUSP28-202ENST00000405954 RPS6KA5O75582 802 aa15.9■□□□□ 0.14
DUSP28-202ENST00000405954 SF3B2Q13435 895 aaKnown RBP15.9■□□□□ 0.14
DUSP28-202ENST00000405954 MSL1Q68DK7 614 aa15.9■□□□□ 0.14
DUSP28-202ENST00000405954 NCAPH2Q6IBW4 605 aa15.9■□□□□ 0.14
DUSP28-202ENST00000405954 SLC35F6Q8N357 371 aa15.9■□□□□ 0.14
DUSP28-202ENST00000405954 UBXN6Q9BZV1 441 aa15.9■□□□□ 0.14
DUSP28-202ENST00000405954 CPS1P31327 1500 aa15.9■□□□□ 0.14
DUSP28-202ENST00000405954 LMTK2Q8IWU2 1503 aa15.9■□□□□ 0.14
DUSP28-202ENST00000405954 PRR36Q9H6K5 1346 aa15.89■□□□□ 0.14
DUSP28-202ENST00000405954 TUBB4BP68371 445 aa15.89■□□□□ 0.13
DUSP28-202ENST00000405954 DPF2Q92785 391 aa15.89■□□□□ 0.13
DUSP28-202ENST00000405954 TEFQ10587 303 aa15.89■□□□□ 0.13
DUSP28-202ENST00000405954 FILIP1LQ4L180 1135 aa15.89■□□□□ 0.13
DUSP28-202ENST00000405954 KCNV1Q6PIU1 500 aa15.89■□□□□ 0.13
DUSP28-202ENST00000405954 PPP1R42Q7Z4L9 355 aa15.89■□□□□ 0.13
DUSP28-202ENST00000405954 ZKSCAN4Q969J2 545 aaPredicted RBP15.89■□□□□ 0.13
DUSP28-202ENST00000405954 TACO1Q9BSH4 297 aaKnown RBP15.89■□□□□ 0.13
DUSP28-202ENST00000405954 YIPF3Q9GZM5 350 aa15.89■□□□□ 0.13
DUSP28-202ENST00000405954 OPA1O60313 960 aa15.89■□□□□ 0.13
DUSP28-202ENST00000405954 HSF2BPO75031 334 aa15.89■□□□□ 0.13
DUSP28-202ENST00000405954 NLRP12P59046 1061 aa15.89■□□□□ 0.13
DUSP28-202ENST00000405954 ATP8B2P98198 1209 aa15.89■□□□□ 0.13
DUSP28-202ENST00000405954 RPUSD2Q8IZ73 545 aaKnown RBP15.89■□□□□ 0.13
DUSP28-202ENST00000405954 CDC5LQ99459 802 aaKnown RBP15.89■□□□□ 0.13
DUSP28-202ENST00000405954 USP32Q8NFA0 1604 aa15.89■□□□□ 0.13
DUSP28-202ENST00000405954 SYKP43405 635 aa15.88■□□□□ 0.13
DUSP28-202ENST00000405954 ARMC3Q5W041 872 aa15.88■□□□□ 0.13
DUSP28-202ENST00000405954 PNMA8AQ86V59 439 aaPredicted RBP15.88■□□□□ 0.13
DUSP28-202ENST00000405954 JADE2Q9NQC1 790 aa15.88■□□□□ 0.13
DUSP28-202ENST00000405954 MED14O60244 1454 aa15.88■□□□□ 0.13
DUSP28-202ENST00000405954 MTF1Q14872 753 aa15.88■□□□□ 0.13
DUSP28-202ENST00000405954 CRYMQ14894 314 aa15.88■□□□□ 0.13
DUSP28-202ENST00000405954 RBM43Q6ZSC3 357 aaKnown RBP15.88■□□□□ 0.13
DUSP28-202ENST00000405954 Q6ZUG5 572 aa15.88■□□□□ 0.13
DUSP28-202ENST00000405954 TBC1D22AQ8WUA7 517 aa15.88■□□□□ 0.13
DUSP28-202ENST00000405954 ANKZF1Q9H8Y5 726 aa15.88■□□□□ 0.13
DUSP28-202ENST00000405954 G3BP2Q9UN86 482 aaKnown RBP15.88■□□□□ 0.13
DUSP28-202ENST00000405954 EIF4E1BA6NMX2 242 aaKnown RBP15.88■□□□□ 0.13
DUSP28-202ENST00000405954 STX10O60499 249 aa15.88■□□□□ 0.13
DUSP28-202ENST00000405954 AACSQ86V21 672 aa15.88■□□□□ 0.13
DUSP28-202ENST00000405954 SH3BP1Q9Y3L3 701 aa15.88■□□□□ 0.13
DUSP28-202ENST00000405954 PTCH1Q13635 1447 aa15.88■□□□□ 0.13
DUSP28-202ENST00000405954 GOLGA6L10A6NI86 522 aa15.87■□□□□ 0.13
DUSP28-202ENST00000405954 SOWAHDA6NJG2 315 aa15.87■□□□□ 0.13
DUSP28-202ENST00000405954 HPDP32754 393 aaPredicted RBP15.87■□□□□ 0.13
DUSP28-202ENST00000405954 FCHSD1Q86WN1 690 aa15.87■□□□□ 0.13
DUSP28-202ENST00000405954 BOLA2Q9H3K6 86 aa15.87■□□□□ 0.13
DUSP28-202ENST00000405954 DLG5Q8TDM6 1919 aa15.87■□□□□ 0.13
DUSP28-202ENST00000405954 KCNJ6P48051 423 aa15.87■□□□□ 0.13
DUSP28-202ENST00000405954 OTUD7BQ6GQQ9 843 aa15.87■□□□□ 0.13
DUSP28-202ENST00000405954 HNRNPLLQ8WVV9 542 aaKnown RBP15.87■□□□□ 0.13
DUSP28-202ENST00000405954 DYDC1Q8WWB3 177 aa15.87■□□□□ 0.13
DUSP28-202ENST00000405954 PPANQ9NQ55 473 aaKnown RBP15.87■□□□□ 0.13
DUSP28-202ENST00000405954 ARHGEF40Q8TER5 1519 aa15.87■□□□□ 0.13
DUSP28-202ENST00000405954 ALKQ9UM73 1620 aa15.87■□□□□ 0.13
DUSP28-202ENST00000405954 AKR1B15C9JRZ8 316 aaPredicted RBP15.87■□□□□ 0.13
DUSP28-202ENST00000405954 E7EVH7 732 aa15.87■□□□□ 0.13
DUSP28-202ENST00000405954 ENC1O14682 589 aa15.87■□□□□ 0.13
DUSP28-202ENST00000405954 MTHFSDQ2M296 383 aaKnown RBP15.87■□□□□ 0.13
DUSP28-202ENST00000405954 HSP90AB4PQ58FF6 505 aa15.87■□□□□ 0.13
DUSP28-202ENST00000405954 SPECC1LQ69YQ0 1117 aa15.87■□□□□ 0.13
DUSP28-202ENST00000405954 THOC1Q96FV9 657 aaKnown RBP15.87■□□□□ 0.13
DUSP28-202ENST00000405954 PCDHA7Q9UN72 937 aa15.87■□□□□ 0.13
DUSP28-202ENST00000405954 CCNHP51946 323 aaPredicted RBP15.86■□□□□ 0.13
DUSP28-202ENST00000405954 FAM227BQ96M60 508 aa15.86■□□□□ 0.13
DUSP28-202ENST00000405954 MLH3Q9UHC1 1453 aa15.86■□□□□ 0.13
DUSP28-202ENST00000405954 SPTLC2O15270 562 aa15.86■□□□□ 0.13
DUSP28-202ENST00000405954 MEFVO15553 781 aaPredicted RBP15.86■□□□□ 0.13
DUSP28-202ENST00000405954 NOA1Q8NC60 698 aaKnown RBP15.86■□□□□ 0.13
DUSP28-202ENST00000405954 NUP88Q99567 741 aaPredicted RBP15.86■□□□□ 0.13
DUSP28-202ENST00000405954 NBPF5PQ86XG9 351 aaPredicted RBP15.85■□□□□ 0.13
DUSP28-202ENST00000405954 TRMT44Q8IYL2 757 aaKnown RBP15.85■□□□□ 0.13
DUSP28-202ENST00000405954 STAG1Q8WVM7 1258 aa15.85■□□□□ 0.13
DUSP28-202ENST00000405954 NEK1Q96PY6 1258 aa15.85■□□□□ 0.13
DUSP28-202ENST00000405954 SLC27A2O14975 620 aa15.85■□□□□ 0.13
DUSP28-202ENST00000405954 CCDC61Q9Y6R9 512 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms