RNA–Protein interactions for RNA: ENST00000405053.7

PDE4D-206, Transcript of phosphodiesterase 4D, humanhuman

TSL 5

Gene PDE4D, Length 512 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-206ENST00000405053 MBD4O95243 580 aa12.99□□□□□ -0.33
PDE4D-206ENST00000405053 PLCG2P16885 1265 aa12.99□□□□□ -0.33
PDE4D-206ENST00000405053 MFAP1P55081 439 aaKnown RBP12.99□□□□□ -0.33
PDE4D-206ENST00000405053 RHBDL3P58872 404 aa12.99□□□□□ -0.33
PDE4D-206ENST00000405053 DLGAP5Q15398 846 aa12.99□□□□□ -0.33
PDE4D-206ENST00000405053 ZNF589Q86UQ0 364 aaPredicted RBP12.99□□□□□ -0.33
PDE4D-206ENST00000405053 AIDAQ96BJ3 306 aa12.99□□□□□ -0.33
PDE4D-206ENST00000405053 NOL10Q9BSC4 688 aaKnown RBP12.99□□□□□ -0.33
PDE4D-206ENST00000405053 AATFQ9NY61 560 aaKnown RBP eCLIP12.99□□□□□ -0.33
PDE4D-206ENST00000405053 RPAP1Q9BWH6 1393 aaPredicted RBP12.98□□□□□ -0.33
PDE4D-206ENST00000405053 EIF5BO60841 1220 aaKnown RBP12.98□□□□□ -0.33
PDE4D-206ENST00000405053 GNAT2P19087 354 aa12.98□□□□□ -0.33
PDE4D-206ENST00000405053 LMOD1P29536 600 aaPredicted RBP12.98□□□□□ -0.33
PDE4D-206ENST00000405053 EPS15P42566 896 aa12.98□□□□□ -0.33
PDE4D-206ENST00000405053 DYNLL1P63167 89 aaKnown RBP12.98□□□□□ -0.33
PDE4D-206ENST00000405053 CDC42EP5Q6NZY7 148 aa12.98□□□□□ -0.33
PDE4D-206ENST00000405053 LCORLQ8N3X6 602 aa12.98□□□□□ -0.33
PDE4D-206ENST00000405053 PRMT6Q96LA8 375 aaPredicted RBP12.98□□□□□ -0.33
PDE4D-206ENST00000405053 ARMT1Q9H993 441 aa12.98□□□□□ -0.33
PDE4D-206ENST00000405053 ADARB2Q9NS39 739 aaKnown RBP12.98□□□□□ -0.33
PDE4D-206ENST00000405053 PCDHAC2Q9Y5I4 1007 aa12.98□□□□□ -0.33
PDE4D-206ENST00000405053 ADAMTSL1Q8N6G6 1762 aa12.98□□□□□ -0.33
PDE4D-206ENST00000405053 SCN4AP35499 1836 aa12.97□□□□□ -0.33
PDE4D-206ENST00000405053 IQCA1LA6NCM1 817 aa12.97□□□□□ -0.33
PDE4D-206ENST00000405053 POTECB2RU33 542 aa12.97□□□□□ -0.33
PDE4D-206ENST00000405053 WNT10BO00744 389 aa12.97□□□□□ -0.33
PDE4D-206ENST00000405053 FOXP2O15409 715 aa12.97□□□□□ -0.33
PDE4D-206ENST00000405053 EPB41L2O43491 1005 aaKnown RBP12.97□□□□□ -0.33
PDE4D-206ENST00000405053 EGFRP00533 1210 aa12.97□□□□□ -0.33
PDE4D-206ENST00000405053 RBM5P52756 815 aaKnown RBP eCLIP12.97□□□□□ -0.33
PDE4D-206ENST00000405053 CCDC129Q6ZRS4 1044 aa12.97□□□□□ -0.33
PDE4D-206ENST00000405053 SAMD7Q7Z3H4 446 aa12.97□□□□□ -0.33
PDE4D-206ENST00000405053 HACL1Q9UJ83 578 aa12.97□□□□□ -0.33
PDE4D-206ENST00000405053 NPM3O75607 178 aaKnown RBP12.96□□□□□ -0.33
PDE4D-206ENST00000405053 WDHD1O75717 1129 aaPredicted RBP12.96□□□□□ -0.33
PDE4D-206ENST00000405053 KIF4BQ2VIQ3 1234 aa12.96□□□□□ -0.33
PDE4D-206ENST00000405053 NBPF9Q3BBW0 867 aa12.96□□□□□ -0.33
PDE4D-206ENST00000405053 SPDYE2Q495Y8 402 aa12.96□□□□□ -0.33
PDE4D-206ENST00000405053 FKBP1CQ5VVH2 108 aa12.96□□□□□ -0.33
PDE4D-206ENST00000405053 GIMAP6Q6P9H5 292 aa12.96□□□□□ -0.33
PDE4D-206ENST00000405053 TRPM4Q8TD43 1214 aa12.96□□□□□ -0.33
PDE4D-206ENST00000405053 SH3RF3Q8TEJ3 882 aaPredicted RBP12.96□□□□□ -0.33
PDE4D-206ENST00000405053 DSCC1Q9BVC3 393 aa12.96□□□□□ -0.33
PDE4D-206ENST00000405053 IDI2Q9BXS1 227 aa12.96□□□□□ -0.33
PDE4D-206ENST00000405053 CRNKL1Q9BZJ0 848 aaKnown RBP12.96□□□□□ -0.33
PDE4D-206ENST00000405053 LSG1Q9H089 658 aaKnown RBP12.96□□□□□ -0.33
PDE4D-206ENST00000405053 USP40Q9NVE5 1235 aa12.96□□□□□ -0.33
PDE4D-206ENST00000405053 MKRN1Q9UHC7 482 aaKnown RBP12.96□□□□□ -0.33
PDE4D-206ENST00000405053 ZMYM6O95789 1325 aa12.95□□□□□ -0.34
PDE4D-206ENST00000405053 GSG1L2A8MUP6 293 aa12.95□□□□□ -0.34
PDE4D-206ENST00000405053 PATL2C9JE40 543 aaKnown RBP12.95□□□□□ -0.34
PDE4D-206ENST00000405053 MYO1BO43795 1136 aa12.95□□□□□ -0.34
PDE4D-206ENST00000405053 REC8O95072 547 aa12.95□□□□□ -0.34
PDE4D-206ENST00000405053 HSPD1P10809 573 aaKnown RBP12.95□□□□□ -0.34
PDE4D-206ENST00000405053 HIRAP54198 1017 aaPredicted RBP12.95□□□□□ -0.34
PDE4D-206ENST00000405053 ALX1Q15699 326 aa12.95□□□□□ -0.34
PDE4D-206ENST00000405053 TBC1D10BQ4KMP7 808 aaPredicted RBP12.95□□□□□ -0.34
PDE4D-206ENST00000405053 VPS53Q5VIR6 699 aa12.95□□□□□ -0.34
PDE4D-206ENST00000405053 USP50Q70EL3 339 aaPredicted RBP12.95□□□□□ -0.34
PDE4D-206ENST00000405053 TEX11Q8IYF3 940 aa12.95□□□□□ -0.34
PDE4D-206ENST00000405053 MAP4K1Q92918 833 aa12.95□□□□□ -0.34
PDE4D-206ENST00000405053 BACH2Q9BYV9 841 aa12.95□□□□□ -0.34
PDE4D-206ENST00000405053 TDRD3Q9H7E2 651 aaKnown RBP12.95□□□□□ -0.34
PDE4D-206ENST00000405053 ATP8A2Q9NTI2 1148 aa12.95□□□□□ -0.34
PDE4D-206ENST00000405053 ZNF70Q9UC06 446 aaPredicted RBP12.95□□□□□ -0.34
PDE4D-206ENST00000405053 SLC4A4Q9Y6R1 1079 aa12.95□□□□□ -0.34
PDE4D-206ENST00000405053 PRKAB2O43741 272 aa12.94□□□□□ -0.34
PDE4D-206ENST00000405053 EPHX2P34913 555 aa12.94□□□□□ -0.34
PDE4D-206ENST00000405053 RBM26Q5T8P6 1007 aaKnown RBP12.94□□□□□ -0.34
PDE4D-206ENST00000405053 KIAA1211Q6ZU35 1233 aa12.94□□□□□ -0.34
PDE4D-206ENST00000405053 TAF1DQ9H5J8 278 aaPredicted RBP12.94□□□□□ -0.34
PDE4D-206ENST00000405053 EPB41L4AQ9HCS5 686 aaPredicted RBP12.94□□□□□ -0.34
PDE4D-206ENST00000405053 DCP1AQ9NPI6 582 aaPredicted RBP12.94□□□□□ -0.34
PDE4D-206ENST00000405053 ECM29Q5VYK3 1845 aa12.94□□□□□ -0.34
PDE4D-206ENST00000405053 PITPNM2Q9BZ72 1349 aa12.93□□□□□ -0.34
PDE4D-206ENST00000405053 FOCADQ5VW36 1801 aa12.93□□□□□ -0.34
PDE4D-206ENST00000405053 COL2A1P02458 1487 aaPredicted RBP12.93□□□□□ -0.34
PDE4D-206ENST00000405053 SEC24BO95487 1268 aa12.93□□□□□ -0.34
PDE4D-206ENST00000405053 VEGFAP15692 232 aaPredicted RBP12.93□□□□□ -0.34
PDE4D-206ENST00000405053 PTH1RQ03431 593 aa12.93□□□□□ -0.34
PDE4D-206ENST00000405053 PNMA8AQ86V59 439 aaPredicted RBP12.93□□□□□ -0.34
PDE4D-206ENST00000405053 IFNL3Q8IZI9 196 aa12.93□□□□□ -0.34
PDE4D-206ENST00000405053 ZC3H15Q8WU90 426 aaKnown RBP12.93□□□□□ -0.34
PDE4D-206ENST00000405053 TGFBRAP1Q8WUH2 860 aa12.93□□□□□ -0.34
PDE4D-206ENST00000405053 SDR42E1Q8WUS8 393 aa12.93□□□□□ -0.34
PDE4D-206ENST00000405053 ANO2Q9NQ90 1003 aa12.93□□□□□ -0.34
PDE4D-206ENST00000405053 DDX4Q9NQI0 724 aaKnown RBP12.93□□□□□ -0.34
PDE4D-206ENST00000405053 TMOD2Q9NZR1 351 aa12.93□□□□□ -0.34
PDE4D-206ENST00000405053 FAM198AQ9UFP1 575 aa12.93□□□□□ -0.34
PDE4D-206ENST00000405053 PGAP2Q9UHJ9 254 aa12.93□□□□□ -0.34
PDE4D-206ENST00000405053 CDK5RAP2Q96SN8 1893 aa12.93□□□□□ -0.34
PDE4D-206ENST00000405053 FLT1P17948 1338 aa12.92□□□□□ -0.34
PDE4D-206ENST00000405053 CLRN2A0PK11 232 aa12.92□□□□□ -0.34
PDE4D-206ENST00000405053 ENTPD3O75355 529 aa12.92□□□□□ -0.34
PDE4D-206ENST00000405053 FGAP02671 866 aa12.92□□□□□ -0.34
PDE4D-206ENST00000405053 NFIAQ12857 509 aa12.92□□□□□ -0.34
PDE4D-206ENST00000405053 DDX60LQ5H9U9 1706 aaKnown RBP12.92□□□□□ -0.34
PDE4D-206ENST00000405053 FAM83AQ86UY5 434 aa12.92□□□□□ -0.34
PDE4D-206ENST00000405053 USP26Q9BXU7 913 aa12.92□□□□□ -0.34
PDE4D-206ENST00000405053 NACAP1Q9BZK3 213 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms