RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 ZNF274Q96GC6 653 aaPredicted RBP10.99□□□□□ -0.65
SMC1B-202ENST00000404354 HPS5Q9UPZ3 1129 aa10.99□□□□□ -0.65
SMC1B-202ENST00000404354 SALL1Q9NSC2 1324 aa10.99□□□□□ -0.65
SMC1B-202ENST00000404354 RGPD8O14715 1765 aaPredicted RBP10.99□□□□□ -0.65
SMC1B-202ENST00000404354 CSB-PGBD3P0DP91 1061 aa10.99□□□□□ -0.65
SMC1B-202ENST00000404354 IMMTQ16891 758 aaKnown RBP10.99□□□□□ -0.65
SMC1B-202ENST00000404354 ZMYM1Q5SVZ6 1142 aa10.99□□□□□ -0.65
SMC1B-202ENST00000404354 KRT40Q6A162 431 aa10.99□□□□□ -0.65
SMC1B-202ENST00000404354 SMYD4Q8IYR2 804 aaPredicted RBP10.99□□□□□ -0.65
SMC1B-202ENST00000404354 CCDC102AQ96A19 550 aa10.99□□□□□ -0.65
SMC1B-202ENST00000404354 KCNJ14Q9UNX9 436 aa10.99□□□□□ -0.65
SMC1B-202ENST00000404354 TEX33O43247 280 aa10.99□□□□□ -0.65
SMC1B-202ENST00000404354 CMA1P23946 247 aa10.99□□□□□ -0.65
SMC1B-202ENST00000404354 GPS2Q13227 327 aa10.99□□□□□ -0.65
SMC1B-202ENST00000404354 RRP12Q5JTH9 1297 aaKnown RBP10.99□□□□□ -0.65
SMC1B-202ENST00000404354 TTLL7Q6ZT98 887 aa10.99□□□□□ -0.65
SMC1B-202ENST00000404354 KLHL34Q8N239 644 aa10.99□□□□□ -0.65
SMC1B-202ENST00000404354 ZKSCAN3Q9BRR0 538 aa10.99□□□□□ -0.65
SMC1B-202ENST00000404354 PHLPP2Q6ZVD8 1323 aa10.99□□□□□ -0.65
SMC1B-202ENST00000404354 POLR2DO15514 142 aaKnown RBP10.98□□□□□ -0.65
SMC1B-202ENST00000404354 AFMP43652 599 aa10.98□□□□□ -0.65
SMC1B-202ENST00000404354 ANTXR2P58335 489 aa10.98□□□□□ -0.65
SMC1B-202ENST00000404354 USP49Q70CQ1 688 aa10.98□□□□□ -0.65
SMC1B-202ENST00000404354 POLR3EQ9NVU0 708 aa10.98□□□□□ -0.65
SMC1B-202ENST00000404354 PALLDQ8WX93 1383 aa10.98□□□□□ -0.65
SMC1B-202ENST00000404354 B4E1Z4 1266 aa10.98□□□□□ -0.65
SMC1B-202ENST00000404354 MYO1CO00159 1063 aa10.98□□□□□ -0.65
SMC1B-202ENST00000404354 CCDC158Q5M9N0 1113 aa10.98□□□□□ -0.65
SMC1B-202ENST00000404354 FUT8Q9BYC5 575 aa10.98□□□□□ -0.65
SMC1B-202ENST00000404354 KCNH3Q9ULD8 1083 aa10.98□□□□□ -0.65
SMC1B-202ENST00000404354 hCG_1642624A0A1W2PR95 340 aa10.98□□□□□ -0.65
SMC1B-202ENST00000404354 ZNF213O14771 459 aa10.98□□□□□ -0.65
SMC1B-202ENST00000404354 YEATS4O95619 227 aa10.98□□□□□ -0.65
SMC1B-202ENST00000404354 KIF4BQ2VIQ3 1234 aa10.98□□□□□ -0.65
SMC1B-202ENST00000404354 ZNF569Q5MCW4 686 aa10.98□□□□□ -0.65
SMC1B-202ENST00000404354 CCDC102BQ68D86 513 aa10.98□□□□□ -0.65
SMC1B-202ENST00000404354 NWD1Q149M9 1564 aa10.98□□□□□ -0.65
SMC1B-202ENST00000404354 TULP2O00295 520 aa10.97□□□□□ -0.65
SMC1B-202ENST00000404354 ARHGAP6O43182 974 aa10.97□□□□□ -0.65
SMC1B-202ENST00000404354 ZAP70P43403 619 aa10.97□□□□□ -0.65
SMC1B-202ENST00000404354 SLC39A14Q15043 492 aa10.97□□□□□ -0.65
SMC1B-202ENST00000404354 AMOTQ4VCS5 1084 aa10.97□□□□□ -0.65
SMC1B-202ENST00000404354 TTC39AQ5SRH9 613 aa10.97□□□□□ -0.65
SMC1B-202ENST00000404354 ATG9AQ7Z3C6 839 aa10.97□□□□□ -0.65
SMC1B-202ENST00000404354 TXLNBQ8N3L3 684 aa10.97□□□□□ -0.65
SMC1B-202ENST00000404354 RAPGEF4Q8WZA2 1011 aa10.97□□□□□ -0.65
SMC1B-202ENST00000404354 CDC5LQ99459 802 aaKnown RBP10.97□□□□□ -0.65
SMC1B-202ENST00000404354 DSCC1Q9BVC3 393 aa10.97□□□□□ -0.65
SMC1B-202ENST00000404354 SLC26A6Q9BXS9 759 aa10.97□□□□□ -0.65
SMC1B-202ENST00000404354 BTBD18B2RXH4 712 aa10.97□□□□□ -0.65
SMC1B-202ENST00000404354 CBFA2T2O43439 604 aa10.97□□□□□ -0.65
SMC1B-202ENST00000404354 METAP2P50579 478 aaKnown RBP eCLIP10.97□□□□□ -0.65
SMC1B-202ENST00000404354 TMEM139Q8IV31 216 aa10.97□□□□□ -0.65
SMC1B-202ENST00000404354 TC2NQ8N9U0 490 aa10.97□□□□□ -0.65
SMC1B-202ENST00000404354 HELLSQ9NRZ9 838 aa10.97□□□□□ -0.65
SMC1B-202ENST00000404354 SERTAD1Q9UHV2 236 aa10.97□□□□□ -0.65
SMC1B-202ENST00000404354 FAN1Q9Y2M0 1017 aa10.97□□□□□ -0.65
SMC1B-202ENST00000404354 IDH1O75874 414 aaKnown RBP10.97□□□□□ -0.65
SMC1B-202ENST00000404354 A1BGP04217 495 aa10.97□□□□□ -0.65
SMC1B-202ENST00000404354 MAP3K9P80192 1104 aa10.97□□□□□ -0.65
SMC1B-202ENST00000404354 DDX17Q92841 729 aaKnown RBP10.97□□□□□ -0.65
SMC1B-202ENST00000404354 PNKPQ96T60 521 aa10.97□□□□□ -0.65
SMC1B-202ENST00000404354 SEC31BQ9NQW1 1179 aa10.97□□□□□ -0.65
SMC1B-202ENST00000404354 DHX16O60231 1041 aaKnown RBP10.96□□□□□ -0.65
SMC1B-202ENST00000404354 ZMYND10O75800 440 aa10.96□□□□□ -0.65
SMC1B-202ENST00000404354 CDC25AP30304 524 aa10.96□□□□□ -0.65
SMC1B-202ENST00000404354 CHMP4BP1P59074 171 aa10.96□□□□□ -0.65
SMC1B-202ENST00000404354 PPARDQ03181 441 aa10.96□□□□□ -0.65
SMC1B-202ENST00000404354 GPIHBP1Q8IV16 184 aa10.96□□□□□ -0.65
SMC1B-202ENST00000404354 RGS22Q8NE09 1264 aa10.96□□□□□ -0.65
SMC1B-202ENST00000404354 CABLES1Q8TDN4 633 aa10.96□□□□□ -0.65
SMC1B-202ENST00000404354 TFR2Q9UP52 801 aa10.96□□□□□ -0.65
SMC1B-202ENST00000404354 MRFAP1Q9Y605 127 aa10.96□□□□□ -0.65
SMC1B-202ENST00000404354 UTYO14607 1347 aa10.96□□□□□ -0.65
SMC1B-202ENST00000404354 CACNA1FO60840 1977 aa10.96□□□□□ -0.65
SMC1B-202ENST00000404354 FAM193AP78312 1265 aa10.96□□□□□ -0.65
SMC1B-202ENST00000404354 TRDNQ13061 729 aa10.96□□□□□ -0.65
SMC1B-202ENST00000404354 CHRNA2Q15822 529 aa10.96□□□□□ -0.65
SMC1B-202ENST00000404354 TAF7LQ5H9L4 462 aa10.96□□□□□ -0.65
SMC1B-202ENST00000404354 FKBP15Q5T1M5 1219 aa10.96□□□□□ -0.65
SMC1B-202ENST00000404354 ATL3Q6DD88 541 aa10.96□□□□□ -0.65
SMC1B-202ENST00000404354 SYNE4Q8N205 404 aa10.96□□□□□ -0.65
SMC1B-202ENST00000404354 GPR161Q8N6U8 529 aaKnown RBP10.96□□□□□ -0.65
SMC1B-202ENST00000404354 ACRBPQ8NEB7 543 aa10.96□□□□□ -0.65
SMC1B-202ENST00000404354 NCOA7Q8NI08 942 aa10.96□□□□□ -0.65
SMC1B-202ENST00000404354 GOLGA1Q92805 767 aa10.96□□□□□ -0.65
SMC1B-202ENST00000404354 PES1O00541 588 aaKnown RBP10.96□□□□□ -0.66
SMC1B-202ENST00000404354 FOXP2O15409 715 aa10.96□□□□□ -0.66
SMC1B-202ENST00000404354 CCP110O43303 1012 aa10.96□□□□□ -0.66
SMC1B-202ENST00000404354 GUCY1A2P33402 732 aa10.96□□□□□ -0.66
SMC1B-202ENST00000404354 CCT6AP40227 531 aaKnown RBP10.96□□□□□ -0.66
SMC1B-202ENST00000404354 CYB5R4Q7L1T6 521 aa10.96□□□□□ -0.66
SMC1B-202ENST00000404354 EEF2KMTQ96G04 330 aa10.96□□□□□ -0.66
SMC1B-202ENST00000404354 RASSF4Q9H2L5 321 aa10.96□□□□□ -0.66
SMC1B-202ENST00000404354 ABCB6Q9NP58 842 aa10.96□□□□□ -0.66
SMC1B-202ENST00000404354 SH3TC1Q8TE82 1336 aa10.96□□□□□ -0.66
SMC1B-202ENST00000404354 GPAA1O43292 621 aa10.95□□□□□ -0.66
SMC1B-202ENST00000404354 JAKMIP3Q5VZ66 844 aa10.95□□□□□ -0.66
SMC1B-202ENST00000404354 AK7Q96M32 723 aa10.95□□□□□ -0.66
SMC1B-202ENST00000404354 CEP126Q9P2H0 1117 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms