RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 HSD3B7Q9H2F3 369 aa13.83□□□□□ -0.2
RBM39-206ENST00000403542 GOLGB1Q14789 3259 aaKnown RBP13.83□□□□□ -0.2
RBM39-206ENST00000403542 CMA1P23946 247 aa13.83□□□□□ -0.2
RBM39-206ENST00000403542 SLC39A14Q15043 492 aa13.83□□□□□ -0.2
RBM39-206ENST00000403542 BRAPQ7Z569 592 aa13.83□□□□□ -0.2
RBM39-206ENST00000403542 CNNM3Q8NE01 707 aa13.83□□□□□ -0.2
RBM39-206ENST00000403542 CHMP4CQ96CF2 233 aa13.83□□□□□ -0.2
RBM39-206ENST00000403542 ERO1AQ96HE7 468 aa13.83□□□□□ -0.2
RBM39-206ENST00000403542 IQSEC3Q9UPP2 1182 aaPredicted RBP13.83□□□□□ -0.2
RBM39-206ENST00000403542 AKAP2Q9Y2D5 859 aa13.83□□□□□ -0.2
RBM39-206ENST00000403542 BTBD18B2RXH4 712 aa13.82□□□□□ -0.2
RBM39-206ENST00000403542 RANBP6O60518 1105 aaKnown RBP13.82□□□□□ -0.2
RBM39-206ENST00000403542 COBLO75128 1261 aa13.82□□□□□ -0.2
RBM39-206ENST00000403542 TCIRG1Q13488 830 aa13.82□□□□□ -0.2
RBM39-206ENST00000403542 TMEM67Q5HYA8 995 aa13.82□□□□□ -0.2
RBM39-206ENST00000403542 APOA5Q6Q788 366 aa13.82□□□□□ -0.2
RBM39-206ENST00000403542 PCDHA5Q9Y5H7 936 aa13.82□□□□□ -0.2
RBM39-206ENST00000403542 GOLGA8AA7E2F4 631 aa13.82□□□□□ -0.2
RBM39-206ENST00000403542 FANCGO15287 622 aa13.82□□□□□ -0.2
RBM39-206ENST00000403542 IARSP41252 1262 aaKnown RBP13.82□□□□□ -0.2
RBM39-206ENST00000403542 ADKP55263 362 aaKnown RBP13.82□□□□□ -0.2
RBM39-206ENST00000403542 ZBTB43O43298 467 aa13.81□□□□□ -0.2
RBM39-206ENST00000403542 METTL16Q86W50 562 aaKnown RBP13.81□□□□□ -0.2
RBM39-206ENST00000403542 ZSWIM4Q9H7M6 989 aa13.81□□□□□ -0.2
RBM39-206ENST00000403542 ARFGEF2Q9Y6D5 1785 aa13.81□□□□□ -0.2
RBM39-206ENST00000403542 PRKAB2O43741 272 aa13.81□□□□□ -0.2
RBM39-206ENST00000403542 CIAO1O76071 339 aa13.81□□□□□ -0.2
RBM39-206ENST00000403542 CDK11BP21127 795 aaKnown RBP13.81□□□□□ -0.2
RBM39-206ENST00000403542 TRIM29Q14134 588 aa13.81□□□□□ -0.2
RBM39-206ENST00000403542 KRT222Q8N1A0 295 aa13.81□□□□□ -0.2
RBM39-206ENST00000403542 CCDC150Q8NCX0 1101 aa13.81□□□□□ -0.2
RBM39-206ENST00000403542 NUP133Q8WUM0 1156 aa13.81□□□□□ -0.2
RBM39-206ENST00000403542 AIDAQ96BJ3 306 aa13.81□□□□□ -0.2
RBM39-206ENST00000403542 DESI2Q9BSY9 194 aa13.81□□□□□ -0.2
RBM39-206ENST00000403542 TBC1D2BQ9UPU7 963 aa13.81□□□□□ -0.2
RBM39-206ENST00000403542 SMIM22K7EJ46 135 aa13.81□□□□□ -0.2
RBM39-206ENST00000403542 IFIT3O14879 490 aaKnown RBP13.81□□□□□ -0.2
RBM39-206ENST00000403542 SEC31AO94979 1220 aaKnown RBP13.81□□□□□ -0.2
RBM39-206ENST00000403542 TOP1P11387 765 aaKnown RBP13.81□□□□□ -0.2
RBM39-206ENST00000403542 BMP6P22004 513 aa13.81□□□□□ -0.2
RBM39-206ENST00000403542 CASP1P29466 404 aa13.81□□□□□ -0.2
RBM39-206ENST00000403542 NR5A1Q13285 461 aa13.81□□□□□ -0.2
RBM39-206ENST00000403542 LRRFIP1Q32MZ4 808 aaKnown RBP13.81□□□□□ -0.2
RBM39-206ENST00000403542 ARMT1Q9H993 441 aa13.81□□□□□ -0.2
RBM39-206ENST00000403542 KCNH3Q9ULD8 1083 aa13.81□□□□□ -0.2
RBM39-206ENST00000403542 SCN11AQ9UI33 1791 aa13.8□□□□□ -0.2
RBM39-206ENST00000403542 ZFYP08048 801 aaPredicted RBP13.8□□□□□ -0.2
RBM39-206ENST00000403542 EVCP57679 992 aa13.8□□□□□ -0.2
RBM39-206ENST00000403542 MYL5Q02045 173 aa13.8□□□□□ -0.2
RBM39-206ENST00000403542 KLHL10Q6JEL2 608 aa13.8□□□□□ -0.2
RBM39-206ENST00000403542 KIF6Q6ZMV9 814 aa13.8□□□□□ -0.2
RBM39-206ENST00000403542 MIGA1Q8NAN2 632 aa13.8□□□□□ -0.2
RBM39-206ENST00000403542 CARD6Q9BX69 1037 aa13.8□□□□□ -0.2
RBM39-206ENST00000403542 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.8□□□□□ -0.22e-8■□□□□ 11.3
RBM39-206ENST00000403542 TMEM94Q12767 1356 aa13.8□□□□□ -0.2
RBM39-206ENST00000403542 NRDCO43847 1150 aa13.8□□□□□ -0.2
RBM39-206ENST00000403542 PRR29P0C7W0 189 aa13.8□□□□□ -0.2
RBM39-206ENST00000403542 SYCP1Q15431 976 aa13.8□□□□□ -0.2
RBM39-206ENST00000403542 OLFM4Q6UX06 510 aa13.8□□□□□ -0.2
RBM39-206ENST00000403542 USP49Q70CQ1 688 aa13.8□□□□□ -0.2
RBM39-206ENST00000403542 CREBRFQ8IUR6 639 aa13.8□□□□□ -0.2
RBM39-206ENST00000403542 CPLX3Q8WVH0 158 aa13.8□□□□□ -0.2
RBM39-206ENST00000403542 ZSWIM5Q9P217 1185 aa13.8□□□□□ -0.2
RBM39-206ENST00000403542 IMPACTQ9P2X3 320 aa13.8□□□□□ -0.2
RBM39-206ENST00000403542 TRMT112Q9UI30 125 aaKnown RBP13.8□□□□□ -0.2
RBM39-206ENST00000403542 ZMYM6O95789 1325 aa13.79□□□□□ -0.2
RBM39-206ENST00000403542 UBN2Q6ZU65 1347 aa13.79□□□□□ -0.2
RBM39-206ENST00000403542 SH2B2O14492 632 aaPredicted RBP13.79□□□□□ -0.2
RBM39-206ENST00000403542 POLR3GO15318 223 aaPredicted RBP13.79□□□□□ -0.2
RBM39-206ENST00000403542 POLR2DO15514 142 aaKnown RBP13.79□□□□□ -0.2
RBM39-206ENST00000403542 SLFN14P0C7P3 912 aa13.79□□□□□ -0.2
RBM39-206ENST00000403542 ADD2P35612 726 aa13.79□□□□□ -0.2
RBM39-206ENST00000403542 CLCN6P51797 869 aa13.79□□□□□ -0.2
RBM39-206ENST00000403542 MAGEB6Q8N7X4 407 aa13.79□□□□□ -0.2
RBM39-206ENST00000403542 ISCA1Q9BUE6 129 aa13.79□□□□□ -0.2
RBM39-206ENST00000403542 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.79□□□□□ -0.21e-13■■□□□ 13.9
RBM39-206ENST00000403542 MORC2Q9Y6X9 1032 aaPredicted RBP13.79□□□□□ -0.2
RBM39-206ENST00000403542 MBD4O95243 580 aa13.79□□□□□ -0.2
RBM39-206ENST00000403542 PDE6AP16499 860 aa13.79□□□□□ -0.2
RBM39-206ENST00000403542 EVA1CP58658 441 aa13.79□□□□□ -0.2
RBM39-206ENST00000403542 KARSQ15046 597 aaKnown RBP13.79□□□□□ -0.2
RBM39-206ENST00000403542 PTPAQ15257 358 aa13.79□□□□□ -0.2
RBM39-206ENST00000403542 MNS1Q8NEH6 495 aa13.79□□□□□ -0.2
RBM39-206ENST00000403542 IRX2Q9BZI1 471 aaPredicted RBP13.79□□□□□ -0.2
RBM39-206ENST00000403542 TMOD3Q9NYL9 352 aa13.79□□□□□ -0.2
RBM39-206ENST00000403542 SLC12A7Q9Y666 1083 aa13.79□□□□□ -0.2
RBM39-206ENST00000403542 TACC3Q9Y6A5 838 aa13.79□□□□□ -0.2
RBM39-206ENST00000403542 PCDH11XQ9BZA7 1347 aa13.78□□□□□ -0.2
RBM39-206ENST00000403542 PCDH11YQ9BZA8 1340 aa13.78□□□□□ -0.2
RBM39-206ENST00000403542 STX17P56962 302 aa13.78□□□□□ -0.2
RBM39-206ENST00000403542 FMR1Q06787 632 aaKnown RBP eCLIP13.78□□□□□ -0.26e-13■□□□□ 10.3
RBM39-206ENST00000403542 CCDC102BQ68D86 513 aa13.78□□□□□ -0.2
RBM39-206ENST00000403542 CPLX2Q6PUV4 134 aaKnown RBP13.78□□□□□ -0.2
RBM39-206ENST00000403542 TRERF1Q96PN7 1200 aa13.78□□□□□ -0.2
RBM39-206ENST00000403542 ZBTB22O15209 634 aa13.78□□□□□ -0.2
RBM39-206ENST00000403542 ETF1P62495 437 aaKnown RBP13.78□□□□□ -0.2
RBM39-206ENST00000403542 TTLL11Q8NHH1 800 aa13.78□□□□□ -0.2
RBM39-206ENST00000403542 UBXN4Q92575 508 aa13.78□□□□□ -0.2
RBM39-206ENST00000403542 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.78□□□□□ -0.2
RBM39-206ENST00000403542 NAPBQ9H115 298 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms