RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 MAPK8IP2Q13387 824 aaPredicted RBP12.86□□□□□ -0.35
SCFD2-202ENST00000401642 APOA5Q6Q788 366 aa12.86□□□□□ -0.35
SCFD2-202ENST00000401642 PLA2G4DQ86XP0 818 aa12.86□□□□□ -0.35
SCFD2-202ENST00000401642 TEX13AQ9BXU3 409 aaPredicted RBP12.86□□□□□ -0.35
SCFD2-202ENST00000401642 GYG1P46976 350 aa12.85□□□□□ -0.35
SCFD2-202ENST00000401642 KIF23Q02241 960 aaPredicted RBP12.85□□□□□ -0.35
SCFD2-202ENST00000401642 PNOCQ13519 176 aa12.85□□□□□ -0.35
SCFD2-202ENST00000401642 CPLX2Q6PUV4 134 aaKnown RBP12.85□□□□□ -0.35
SCFD2-202ENST00000401642 DHX40Q8IX18 779 aaKnown RBP12.85□□□□□ -0.35
SCFD2-202ENST00000401642 FMR1NBQ8N0W7 255 aaPredicted RBP12.85□□□□□ -0.35
SCFD2-202ENST00000401642 FAM177A1Q8N128 213 aaPredicted RBP12.85□□□□□ -0.35
SCFD2-202ENST00000401642 LCORLQ8N3X6 602 aa12.85□□□□□ -0.35
SCFD2-202ENST00000401642 ALS2Q96Q42 1657 aa12.85□□□□□ -0.35
SCFD2-202ENST00000401642 SOS2Q07890 1332 aaPredicted RBP12.85□□□□□ -0.35
SCFD2-202ENST00000401642 IGSF3O75054 1194 aa12.85□□□□□ -0.35
SCFD2-202ENST00000401642 FAM182BQ5T319 152 aa12.85□□□□□ -0.35
SCFD2-202ENST00000401642 CREBRFQ8IUR6 639 aa12.85□□□□□ -0.35
SCFD2-202ENST00000401642 IFNL3Q8IZI9 196 aa12.85□□□□□ -0.35
SCFD2-202ENST00000401642 ENGASEQ8NFI3 743 aa12.85□□□□□ -0.35
SCFD2-202ENST00000401642 BTBD18B2RXH4 712 aa12.85□□□□□ -0.35
SCFD2-202ENST00000401642 ATP1A3P13637 1013 aa12.85□□□□□ -0.35
SCFD2-202ENST00000401642 MAP3K12Q12852 859 aa12.85□□□□□ -0.35
SCFD2-202ENST00000401642 PUM3Q15397 648 aaKnown RBP12.85□□□□□ -0.35
SCFD2-202ENST00000401642 ADALQ6DHV7 355 aa12.85□□□□□ -0.35
SCFD2-202ENST00000401642 ZNF710Q8N1W2 664 aa12.85□□□□□ -0.35
SCFD2-202ENST00000401642 AGXT2Q9BYV1 514 aa12.85□□□□□ -0.35
SCFD2-202ENST00000401642 EPB41L4AQ9HCS5 686 aaPredicted RBP12.85□□□□□ -0.35
SCFD2-202ENST00000401642 PHRF1Q9P1Y6 1649 aaKnown RBP12.85□□□□□ -0.35
SCFD2-202ENST00000401642 SALL1Q9NSC2 1324 aa12.84□□□□□ -0.35
SCFD2-202ENST00000401642 ADAMTSL3P82987 1691 aa12.84□□□□□ -0.35
SCFD2-202ENST00000401642 FOXN1O15353 648 aa12.84□□□□□ -0.35
SCFD2-202ENST00000401642 KCNQ2O43526 872 aa12.84□□□□□ -0.35
SCFD2-202ENST00000401642 SLC5A1P13866 664 aa12.84□□□□□ -0.35
SCFD2-202ENST00000401642 SYKP43405 635 aa12.84□□□□□ -0.35
SCFD2-202ENST00000401642 ZNF827Q17R98 1081 aa12.84□□□□□ -0.35
SCFD2-202ENST00000401642 PPP4R3BQ5MIZ7 849 aa12.84□□□□□ -0.35
SCFD2-202ENST00000401642 STRBPQ96SI9 672 aaKnown RBP12.84□□□□□ -0.35
SCFD2-202ENST00000401642 RTEL1Q9NZ71 1219 aa12.84□□□□□ -0.35
SCFD2-202ENST00000401642 CYP7A1P22680 504 aa12.84□□□□□ -0.35
SCFD2-202ENST00000401642 MFSD6Q6ZSS7 791 aa12.84□□□□□ -0.35
SCFD2-202ENST00000401642 GRAMD1CQ8IYS0 662 aa12.84□□□□□ -0.35
SCFD2-202ENST00000401642 ZBTB9Q96C00 473 aa12.84□□□□□ -0.35
SCFD2-202ENST00000401642 XPO4Q9C0E2 1151 aaKnown RBP12.84□□□□□ -0.35
SCFD2-202ENST00000401642 KIAA1468Q9P260 1216 aa12.84□□□□□ -0.35
SCFD2-202ENST00000401642 MROH7-TTC4A0A0A0MT08 1334 aa12.84□□□□□ -0.35
SCFD2-202ENST00000401642 MRC1P22897 1456 aa12.84□□□□□ -0.35
SCFD2-202ENST00000401642 PIP4K2BP78356 416 aa12.83□□□□□ -0.35
SCFD2-202ENST00000401642 NR5A1Q13285 461 aa12.83□□□□□ -0.35
SCFD2-202ENST00000401642 LRRC8AQ8IWT6 810 aa12.83□□□□□ -0.35
SCFD2-202ENST00000401642 DHX37Q8IY37 1157 aaKnown RBP12.83□□□□□ -0.35
SCFD2-202ENST00000401642 SPTLC3Q9NUV7 552 aa12.83□□□□□ -0.35
SCFD2-202ENST00000401642 RFX7Q2KHR2 1363 aa12.83□□□□□ -0.36
SCFD2-202ENST00000401642 CTAGE5O15320 804 aa12.83□□□□□ -0.36
SCFD2-202ENST00000401642 RANBP6O60518 1105 aaKnown RBP12.83□□□□□ -0.36
SCFD2-202ENST00000401642 GRIN1Q05586 938 aa12.83□□□□□ -0.36
SCFD2-202ENST00000401642 RBM43Q6ZSC3 357 aaKnown RBP12.83□□□□□ -0.36
SCFD2-202ENST00000401642 KCNG4Q8TDN1 519 aa12.83□□□□□ -0.36
SCFD2-202ENST00000401642 LPIN2Q92539 896 aa12.83□□□□□ -0.36
SCFD2-202ENST00000401642 NAT10Q9H0A0 1025 aaKnown RBP12.83□□□□□ -0.36
SCFD2-202ENST00000401642 TACC3Q9Y6A5 838 aa12.83□□□□□ -0.36
SCFD2-202ENST00000401642 ZNF142P52746 1687 aaPredicted RBP12.83□□□□□ -0.36
SCFD2-202ENST00000401642 SH2B2O14492 632 aaPredicted RBP12.83□□□□□ -0.36
SCFD2-202ENST00000401642 TPM3P06753 285 aa12.83□□□□□ -0.36
SCFD2-202ENST00000401642 IGHMBP2P38935 993 aaKnown RBP12.83□□□□□ -0.36
SCFD2-202ENST00000401642 CRKLP46109 303 aaKnown RBP12.83□□□□□ -0.36
SCFD2-202ENST00000401642 TTF1Q15361 905 aaPredicted RBP12.83□□□□□ -0.36
SCFD2-202ENST00000401642 PRIMPOLQ96LW4 560 aa12.83□□□□□ -0.36
SCFD2-202ENST00000401642 KIF1AQ12756 1690 aa12.83□□□□□ -0.36
SCFD2-202ENST00000401642 BAZ2BQ9UIF8 2168 aaKnown RBP12.82□□□□□ -0.36
SCFD2-202ENST00000401642 RIC1Q4ADV7 1423 aa12.82□□□□□ -0.36
SCFD2-202ENST00000401642 COBLO75128 1261 aa12.82□□□□□ -0.36
SCFD2-202ENST00000401642 SERPINC1P01008 464 aa12.82□□□□□ -0.36
SCFD2-202ENST00000401642 EVX2Q03828 476 aa12.82□□□□□ -0.36
SCFD2-202ENST00000401642 TRIM28Q13263 835 aaKnown RBP12.82□□□□□ -0.36
SCFD2-202ENST00000401642 UTP14AQ9BVJ6 771 aaKnown RBP12.82□□□□□ -0.36
SCFD2-202ENST00000401642 STRCP1A6NGW2 1772 aa12.82□□□□□ -0.36
SCFD2-202ENST00000401642 KCPQ6ZWJ8 1503 aa12.82□□□□□ -0.36
SCFD2-202ENST00000401642 U2AF2P26368 475 aaKnown RBP eCLIP12.82□□□□□ -0.36
SCFD2-202ENST00000401642 SSRP1Q08945 709 aaKnown RBP12.82□□□□□ -0.36
SCFD2-202ENST00000401642 COL18A1P39060 1754 aa12.82□□□□□ -0.36
SCFD2-202ENST00000401642 TERF1P54274 439 aa12.81□□□□□ -0.36
SCFD2-202ENST00000401642 DDB1Q16531 1140 aa12.81□□□□□ -0.36
SCFD2-202ENST00000401642 ERICH2A1L162 156 aa12.81□□□□□ -0.36
SCFD2-202ENST00000401642 DYNLL1P63167 89 aaKnown RBP12.81□□□□□ -0.36
SCFD2-202ENST00000401642 CFAP100Q494V2 611 aa12.81□□□□□ -0.36
SCFD2-202ENST00000401642 TRMT44Q8IYL2 757 aaKnown RBP12.81□□□□□ -0.36
SCFD2-202ENST00000401642 VGLL2Q8N8G2 317 aa12.81□□□□□ -0.36
SCFD2-202ENST00000401642 CNNM3Q8NE01 707 aa12.81□□□□□ -0.36
SCFD2-202ENST00000401642 CCDC112Q8NEF3 446 aa12.81□□□□□ -0.36
SCFD2-202ENST00000401642 LY9Q9HBG7 655 aa12.81□□□□□ -0.36
SCFD2-202ENST00000401642 TFCP2L1Q9NZI6 479 aa12.81□□□□□ -0.36
SCFD2-202ENST00000401642 FAM205CA6NFA0 338 aa12.81□□□□□ -0.36
SCFD2-202ENST00000401642 CASP1P29466 404 aa12.81□□□□□ -0.36
SCFD2-202ENST00000401642 WTAPQ15007 396 aa12.81□□□□□ -0.36
SCFD2-202ENST00000401642 CEP135Q66GS9 1140 aa12.81□□□□□ -0.36
SCFD2-202ENST00000401642 KLHL10Q6JEL2 608 aa12.81□□□□□ -0.36
SCFD2-202ENST00000401642 PDCL2Q8N4E4 241 aa12.81□□□□□ -0.36
SCFD2-202ENST00000401642 STAMQ92783 540 aa12.81□□□□□ -0.36
SCFD2-202ENST00000401642 UBAC1Q9BSL1 405 aa12.81□□□□□ -0.36
SCFD2-202ENST00000401642 ZMYM6O95789 1325 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms