RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 LY9Q9HBG7 655 aa18.39■□□□□ 0.53
CDC42-203ENST00000400259 SRP68Q9UHB9 627 aaKnown RBP18.39■□□□□ 0.53
CDC42-203ENST00000400259 RTCBQ9Y3I0 505 aaKnown RBP18.39■□□□□ 0.53
CDC42-203ENST00000400259 SEMA3EO15041 775 aa18.38■□□□□ 0.53
CDC42-203ENST00000400259 CDKL5O76039 1030 aa18.38■□□□□ 0.53
CDC42-203ENST00000400259 GYG1P46976 350 aa18.38■□□□□ 0.53
CDC42-203ENST00000400259 CAVIN4Q5BKX8 364 aa18.38■□□□□ 0.53
CDC42-203ENST00000400259 BICD2Q8TD16 824 aa18.38■□□□□ 0.53
CDC42-203ENST00000400259 NLRP3Q96P20 1036 aa18.38■□□□□ 0.53
CDC42-203ENST00000400259 TNMDQ9H2S6 317 aa18.38■□□□□ 0.53
CDC42-203ENST00000400259 CCDC39Q9UFE4 941 aa18.38■□□□□ 0.53
CDC42-203ENST00000400259 NOL7Q9UMY1 257 aaKnown RBP18.38■□□□□ 0.53
CDC42-203ENST00000400259 SLC4A4Q9Y6R1 1079 aa18.38■□□□□ 0.53
CDC42-203ENST00000400259 METAP2P50579 478 aaKnown RBP eCLIP18.38■□□□□ 0.53
CDC42-203ENST00000400259 BRAPQ7Z569 592 aa18.38■□□□□ 0.53
CDC42-203ENST00000400259 NBPF5PQ86XG9 351 aaPredicted RBP18.38■□□□□ 0.53
CDC42-203ENST00000400259 PRKAB2O43741 272 aa18.37■□□□□ 0.53
CDC42-203ENST00000400259 NR1I2O75469 434 aa18.37■□□□□ 0.53
CDC42-203ENST00000400259 RPS8P62241 208 aaKnown RBP18.37■□□□□ 0.53
CDC42-203ENST00000400259 GUCY1B3Q02153 619 aa18.37■□□□□ 0.53
CDC42-203ENST00000400259 FAM84BQ96KN1 310 aaPredicted RBP18.37■□□□□ 0.53
CDC42-203ENST00000400259 RTEL1Q9NZ71 1219 aa18.37■□□□□ 0.53
CDC42-203ENST00000400259 TACC3Q9Y6A5 838 aa18.37■□□□□ 0.53
CDC42-203ENST00000400259 BAZ2AQ9UIF9 1905 aaKnown RBP18.37■□□□□ 0.53
CDC42-203ENST00000400259 CYP7A1P22680 504 aa18.37■□□□□ 0.53
CDC42-203ENST00000400259 CTDSPL2Q05D32 466 aa18.37■□□□□ 0.53
CDC42-203ENST00000400259 TPTE2Q6XPS3 522 aa18.37■□□□□ 0.53
CDC42-203ENST00000400259 MFSD6Q6ZSS7 791 aa18.37■□□□□ 0.53
CDC42-203ENST00000400259 SMIM5Q71RC9 77 aa18.37■□□□□ 0.53
CDC42-203ENST00000400259 FBXO33Q7Z6M2 555 aa18.37■□□□□ 0.53
CDC42-203ENST00000400259 ZSWIM5Q9P217 1185 aa18.37■□□□□ 0.53
CDC42-203ENST00000400259 DLEC1Q9Y238 1755 aa18.37■□□□□ 0.53
CDC42-203ENST00000400259 LAMB1P07942 1786 aa18.36■□□□□ 0.53
CDC42-203ENST00000400259 PPFIA3O75145 1194 aa18.36■□□□□ 0.53
CDC42-203ENST00000400259 TDO2P48775 406 aa18.36■□□□□ 0.53
CDC42-203ENST00000400259 TMEM67Q5HYA8 995 aa18.36■□□□□ 0.53
CDC42-203ENST00000400259 ANKRD2Q9GZV1 360 aa18.36■□□□□ 0.53
CDC42-203ENST00000400259 PODXL2Q9NZ53 605 aa18.36■□□□□ 0.53
CDC42-203ENST00000400259 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.36■□□□□ 0.53
CDC42-203ENST00000400259 ANAPC4Q9UJX5 808 aa18.36■□□□□ 0.53
CDC42-203ENST00000400259 UBR3Q6ZT12 1888 aa18.36■□□□□ 0.53
CDC42-203ENST00000400259 ZBTB43O43298 467 aa18.35■□□□□ 0.53
CDC42-203ENST00000400259 TYRO3Q06418 890 aa18.35■□□□□ 0.53
CDC42-203ENST00000400259 CPLX2Q6PUV4 134 aaKnown RBP18.35■□□□□ 0.53
CDC42-203ENST00000400259 ADGRA1Q86SQ6 560 aa18.35■□□□□ 0.53
CDC42-203ENST00000400259 ARHGEF1Q92888 912 aaKnown RBP18.35■□□□□ 0.53
CDC42-203ENST00000400259 GJD4Q96KN9 370 aaPredicted RBP18.35■□□□□ 0.53
CDC42-203ENST00000400259 FTOQ9C0B1 505 aaKnown RBP eCLIP18.35■□□□□ 0.53
CDC42-203ENST00000400259 RNF41Q9H4P4 317 aaPredicted RBP18.35■□□□□ 0.53
CDC42-203ENST00000400259 SENP2Q9HC62 589 aa18.35■□□□□ 0.53
CDC42-203ENST00000400259 ONECUT3O60422 494 aaPredicted RBP18.35■□□□□ 0.53
CDC42-203ENST00000400259 KDM4AO75164 1064 aa18.35■□□□□ 0.53
CDC42-203ENST00000400259 NTRK3Q16288 839 aa18.35■□□□□ 0.53
CDC42-203ENST00000400259 CAMK4Q16566 473 aa18.35■□□□□ 0.53
CDC42-203ENST00000400259 RAB11FIP4Q86YS3 637 aa18.35■□□□□ 0.53
CDC42-203ENST00000400259 RIOK1Q9BRS2 568 aaKnown RBP18.35■□□□□ 0.53
CDC42-203ENST00000400259 IQSEC3Q9UPP2 1182 aaPredicted RBP18.35■□□□□ 0.53
CDC42-203ENST00000400259 MRVI1Q9Y6F6 885 aa18.35■□□□□ 0.53
CDC42-203ENST00000400259 STK36Q9NRP7 1315 aa18.35■□□□□ 0.53
CDC42-203ENST00000400259 MYH2Q9UKX2 1941 aa18.34■□□□□ 0.53
CDC42-203ENST00000400259 MAGEB6P1A0A0J9YX57 407 aa18.34■□□□□ 0.53
CDC42-203ENST00000400259 WTIPA6NIX2 430 aaPredicted RBP18.34■□□□□ 0.53
CDC42-203ENST00000400259 MIGA1Q8NAN2 632 aa18.34■□□□□ 0.53
CDC42-203ENST00000400259 NAP1L5Q96NT1 182 aaPredicted RBP18.34■□□□□ 0.53
CDC42-203ENST00000400259 INCENPQ9NQS7 918 aa18.34■□□□□ 0.53
CDC42-203ENST00000400259 POLR3EQ9NVU0 708 aa18.34■□□□□ 0.53
CDC42-203ENST00000400259 USP25Q9UHP3 1055 aa18.34■□□□□ 0.53
CDC42-203ENST00000400259 DUOX1Q9NRD9 1551 aa18.34■□□□□ 0.53
CDC42-203ENST00000400259 YEATS4O95619 227 aa18.34■□□□□ 0.53
CDC42-203ENST00000400259 MSNP26038 577 aaKnown RBP18.34■□□□□ 0.53
CDC42-203ENST00000400259 CDC27P30260 824 aa18.34■□□□□ 0.53
CDC42-203ENST00000400259 CEBPZQ03701 1054 aaKnown RBP18.34■□□□□ 0.53
CDC42-203ENST00000400259 AMIGO3Q86WK7 504 aa18.34■□□□□ 0.53
CDC42-203ENST00000400259 VPS37DQ86XT2 251 aa18.34■□□□□ 0.53
CDC42-203ENST00000400259 FAM200AQ8TCP9 573 aa18.34■□□□□ 0.53
CDC42-203ENST00000400259 FAM217BQ9NTX9 383 aaPredicted RBP18.34■□□□□ 0.53
CDC42-203ENST00000400259 RAI14Q9P0K7 980 aa18.34■□□□□ 0.53
CDC42-203ENST00000400259 ABCF2Q9UG63 623 aa18.34■□□□□ 0.53
CDC42-203ENST00000400259 MYH6P13533 1939 aa18.34■□□□□ 0.53
CDC42-203ENST00000400259 IFIT3O14879 490 aaKnown RBP18.33■□□□□ 0.53
CDC42-203ENST00000400259 RCAN1P53805 252 aa18.33■□□□□ 0.53
CDC42-203ENST00000400259 KIF23Q02241 960 aaPredicted RBP18.33■□□□□ 0.53
CDC42-203ENST00000400259 TMED8Q6PL24 325 aaPredicted RBP18.33■□□□□ 0.53
CDC42-203ENST00000400259 CCAR1Q8IX12 1150 aaKnown RBP18.33■□□□□ 0.53
CDC42-203ENST00000400259 ZKSCAN5Q9Y2L8 839 aa18.33■□□□□ 0.53
CDC42-203ENST00000400259 CTAGE5O15320 804 aa18.33■□□□□ 0.52
CDC42-203ENST00000400259 TM4SF1P30408 202 aa18.33■□□□□ 0.52
CDC42-203ENST00000400259 PPARAQ07869 468 aa18.33■□□□□ 0.52
CDC42-203ENST00000400259 MYSM1Q5VVJ2 828 aa18.33■□□□□ 0.52
CDC42-203ENST00000400259 OTUD7BQ6GQQ9 843 aa18.33■□□□□ 0.52
CDC42-203ENST00000400259 NFXL1Q6ZNB6 911 aa18.33■□□□□ 0.52
CDC42-203ENST00000400259 MICU3Q86XE3 530 aa18.33■□□□□ 0.52
CDC42-203ENST00000400259 A0A1W2PQ27 194 aa18.32■□□□□ 0.52
CDC42-203ENST00000400259 A0A1W2PQ64 194 aa18.32■□□□□ 0.52
CDC42-203ENST00000400259 A0A1W2PQD8 194 aa18.32■□□□□ 0.52
CDC42-203ENST00000400259 GOLGA8AA7E2F4 631 aa18.32■□□□□ 0.52
CDC42-203ENST00000400259 SART3Q15020 963 aaKnown RBP18.32■□□□□ 0.52
CDC42-203ENST00000400259 LINC00301Q8NCQ3 95 aa18.32■□□□□ 0.52
CDC42-203ENST00000400259 ENGASEQ8NFI3 743 aa18.32■□□□□ 0.52
CDC42-203ENST00000400259 BRIP1Q9BX63 1249 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms