RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 ARHGAP23Q9P227 1491 aa15.53■□□□□ 0.08
SIRPA-203ENST00000400068 PARP10Q53GL7 1025 aa15.53■□□□□ 0.08
SIRPA-203ENST00000400068 DHX58Q96C10 678 aa15.53■□□□□ 0.08
SIRPA-203ENST00000400068 PSMD1Q99460 953 aa15.53■□□□□ 0.08
SIRPA-203ENST00000400068 STX17P56962 302 aa15.52■□□□□ 0.08
SIRPA-203ENST00000400068 FAM160A1Q05DH4 1040 aa15.52■□□□□ 0.08
SIRPA-203ENST00000400068 SOGA3Q5TF21 947 aa15.52■□□□□ 0.08
SIRPA-203ENST00000400068 ANO1Q5XXA6 986 aa15.52■□□□□ 0.08
SIRPA-203ENST00000400068 LLPHQ9BRT6 129 aaKnown RBP15.52■□□□□ 0.08
SIRPA-203ENST00000400068 CGNQ9P2M7 1197 aaKnown RBP15.52■□□□□ 0.08
SIRPA-203ENST00000400068 SMTNL1A8MU46 457 aa15.52■□□□□ 0.08
SIRPA-203ENST00000400068 CIAO1O76071 339 aa15.52■□□□□ 0.08
SIRPA-203ENST00000400068 KAT14Q9H8E8 782 aa15.52■□□□□ 0.08
SIRPA-203ENST00000400068 KDM6AO15550 1401 aaPredicted RBP15.52■□□□□ 0.08
SIRPA-203ENST00000400068 LRMPQ12912 555 aa15.52■□□□□ 0.07
SIRPA-203ENST00000400068 RASGRF1Q13972 1273 aa15.52■□□□□ 0.07
SIRPA-203ENST00000400068 RABL6Q3YEC7 729 aaPredicted RBP15.52■□□□□ 0.07
SIRPA-203ENST00000400068 DIS3L2Q8IYB7 885 aaKnown RBP15.52■□□□□ 0.07
SIRPA-203ENST00000400068 PPP1R9BQ96SB3 815 aa15.52■□□□□ 0.07
SIRPA-203ENST00000400068 ERFEQ4G0M1 354 aa15.51■□□□□ 0.07
SIRPA-203ENST00000400068 STAMQ92783 540 aa15.51■□□□□ 0.07
SIRPA-203ENST00000400068 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.51■□□□□ 0.07
SIRPA-203ENST00000400068 V9GYY5 206 aaPredicted RBP15.51■□□□□ 0.07
SIRPA-203ENST00000400068 DLG5Q8TDM6 1919 aa15.51■□□□□ 0.07
SIRPA-203ENST00000400068 SLIT1O75093 1534 aa15.51■□□□□ 0.07
SIRPA-203ENST00000400068 CYP19A1P11511 503 aaPredicted RBP15.51■□□□□ 0.07
SIRPA-203ENST00000400068 IL6STP40189 918 aaPredicted RBP15.51■□□□□ 0.07
SIRPA-203ENST00000400068 PDE4BQ07343 736 aa15.51■□□□□ 0.07
SIRPA-203ENST00000400068 ZBTB9Q96C00 473 aa15.51■□□□□ 0.07
SIRPA-203ENST00000400068 IFNKQ9P0W0 207 aa15.51■□□□□ 0.07
SIRPA-203ENST00000400068 MROH5Q6ZUA9 1318 aa15.51■□□□□ 0.07
SIRPA-203ENST00000400068 ZNF609O15014 1411 aa15.51■□□□□ 0.07
SIRPA-203ENST00000400068 USP17L12C9JPN9 530 aa15.51■□□□□ 0.07
SIRPA-203ENST00000400068 USP17L21D6R901 530 aa15.51■□□□□ 0.07
SIRPA-203ENST00000400068 SKILP12757 684 aa15.51■□□□□ 0.07
SIRPA-203ENST00000400068 PTPN14Q15678 1187 aa15.51■□□□□ 0.07
SIRPA-203ENST00000400068 PTPN21Q16825 1174 aa15.51■□□□□ 0.07
SIRPA-203ENST00000400068 CLIC6Q96NY7 704 aa15.51■□□□□ 0.07
SIRPA-203ENST00000400068 RGPD8O14715 1765 aaPredicted RBP15.51■□□□□ 0.07
SIRPA-203ENST00000400068 HIBADHP31937 336 aaKnown RBP15.51■□□□□ 0.07
SIRPA-203ENST00000400068 DYNLL1P63167 89 aaKnown RBP15.51■□□□□ 0.07
SIRPA-203ENST00000400068 ZNF174Q15697 407 aa15.51■□□□□ 0.07
SIRPA-203ENST00000400068 ISCA1Q9BUE6 129 aa15.51■□□□□ 0.07
SIRPA-203ENST00000400068 NRXN3Q9Y4C0 1643 aa15.5■□□□□ 0.07
SIRPA-203ENST00000400068 CALRP27797 417 aaKnown RBP15.5■□□□□ 0.07
SIRPA-203ENST00000400068 MYSM1Q5VVJ2 828 aa15.5■□□□□ 0.07
SIRPA-203ENST00000400068 GPR108Q9NPR9 543 aa15.5■□□□□ 0.07
SIRPA-203ENST00000400068 VPS54Q9P1Q0 977 aa15.5■□□□□ 0.07
SIRPA-203ENST00000400068 ANKRD26Q9UPS8 1709 aa15.5■□□□□ 0.07
SIRPA-203ENST00000400068 CCDC194A0A1B0GVG4 234 aa15.5■□□□□ 0.07
SIRPA-203ENST00000400068 OFD1O75665 1012 aa15.5■□□□□ 0.07
SIRPA-203ENST00000400068 AKNAD1Q5T1N1 836 aa15.5■□□□□ 0.07
SIRPA-203ENST00000400068 CCDC47Q96A33 483 aaKnown RBP15.5■□□□□ 0.07
SIRPA-203ENST00000400068 CDK5RAP3Q96JB5 506 aa15.5■□□□□ 0.07
SIRPA-203ENST00000400068 REREQ9P2R6 1566 aa15.5■□□□□ 0.07
SIRPA-203ENST00000400068 TOP1P11387 765 aaKnown RBP15.5■□□□□ 0.07
SIRPA-203ENST00000400068 ADD2P35612 726 aa15.5■□□□□ 0.07
SIRPA-203ENST00000400068 LCORLQ8N3X6 602 aa15.5■□□□□ 0.07
SIRPA-203ENST00000400068 ZNF622Q969S3 477 aaKnown RBP eCLIP15.5■□□□□ 0.07
SIRPA-203ENST00000400068 ZNF274Q96GC6 653 aaPredicted RBP15.5■□□□□ 0.07
SIRPA-203ENST00000400068 PCDHA7Q9UN72 937 aa15.5■□□□□ 0.07
SIRPA-203ENST00000400068 TSPY3P0CV98 308 aa15.49■□□□□ 0.07
SIRPA-203ENST00000400068 TSPY8P0CW00 308 aa15.49■□□□□ 0.07
SIRPA-203ENST00000400068 RPS8P62241 208 aaKnown RBP15.49■□□□□ 0.07
SIRPA-203ENST00000400068 HEATR3Q7Z4Q2 680 aa15.49■□□□□ 0.07
SIRPA-203ENST00000400068 PDCL3Q9H2J4 239 aa15.49■□□□□ 0.07
SIRPA-203ENST00000400068 NRBP1Q9UHY1 535 aa15.49■□□□□ 0.07
SIRPA-203ENST00000400068 CEP131Q9UPN4 1083 aa15.49■□□□□ 0.07
SIRPA-203ENST00000400068 RPAP1Q9BWH6 1393 aaPredicted RBP15.49■□□□□ 0.07
SIRPA-203ENST00000400068 BTBD18B2RXH4 712 aa15.49■□□□□ 0.07
SIRPA-203ENST00000400068 ZNF202O95125 648 aa15.49■□□□□ 0.07
SIRPA-203ENST00000400068 SMARCE1Q969G3 411 aa15.49■□□□□ 0.07
SIRPA-203ENST00000400068 GPR101Q96P66 508 aaPredicted RBP15.49■□□□□ 0.07
SIRPA-203ENST00000400068 UIMC1Q96RL1 719 aa15.49■□□□□ 0.07
SIRPA-203ENST00000400068 DENND2AQ9ULE3 1009 aa15.49■□□□□ 0.07
SIRPA-203ENST00000400068 EIF6P56537 245 aaKnown RBP15.49■□□□□ 0.07
SIRPA-203ENST00000400068 FILIP1LQ4L180 1135 aa15.49■□□□□ 0.07
SIRPA-203ENST00000400068 PPFIBP1Q86W92 1011 aa15.49■□□□□ 0.07
SIRPA-203ENST00000400068 PEAK1Q9H792 1746 aa15.49■□□□□ 0.07
SIRPA-203ENST00000400068 MCM7P33993 719 aa15.48■□□□□ 0.07
SIRPA-203ENST00000400068 UBASH3AP57075 661 aa15.48■□□□□ 0.07
SIRPA-203ENST00000400068 NCOA3Q9Y6Q9 1424 aa15.48■□□□□ 0.07
SIRPA-203ENST00000400068 NDUFA8P51970 172 aa15.48■□□□□ 0.07
SIRPA-203ENST00000400068 TRAPPC3LQ5T215 181 aa15.48■□□□□ 0.07
SIRPA-203ENST00000400068 BRAPQ7Z569 592 aa15.48■□□□□ 0.07
SIRPA-203ENST00000400068 TMEM87BQ96K49 555 aa15.48■□□□□ 0.07
SIRPA-203ENST00000400068 CLGNO14967 610 aa15.48■□□□□ 0.07
SIRPA-203ENST00000400068 USP21Q9UK80 565 aa15.48■□□□□ 0.07
SIRPA-203ENST00000400068 LDHBP07195 334 aaKnown RBP15.47■□□□□ 0.07
SIRPA-203ENST00000400068 GNAT2P19087 354 aa15.47■□□□□ 0.07
SIRPA-203ENST00000400068 CCDC96Q2M329 555 aa15.47■□□□□ 0.07
SIRPA-203ENST00000400068 TBC1D10CQ8IV04 446 aa15.47■□□□□ 0.07
SIRPA-203ENST00000400068 CNBD1Q8NA66 436 aa15.47■□□□□ 0.07
SIRPA-203ENST00000400068 NOC3LQ8WTT2 800 aaKnown RBP15.47■□□□□ 0.07
SIRPA-203ENST00000400068 USP42Q9H9J4 1324 aaKnown RBP15.47■□□□□ 0.07
SIRPA-203ENST00000400068 C3P01024 1663 aa15.47■□□□□ 0.07
SIRPA-203ENST00000400068 TRIM75PA6NK02 468 aa15.47■□□□□ 0.07
SIRPA-203ENST00000400068 BAG3O95817 575 aa15.47■□□□□ 0.07
SIRPA-203ENST00000400068 FBXO18Q8NFZ0 1043 aa15.47■□□□□ 0.07
SIRPA-203ENST00000400068 PGBD1Q96JS3 809 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms