RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 GRIK5Q16478 980 aa17.87■□□□□ 0.45
COL25A1-201ENST00000399126 NAA16Q6N069 864 aaPredicted RBP17.87■□□□□ 0.45
COL25A1-201ENST00000399126 GTF3C6Q969F1 213 aa17.87■□□□□ 0.45
COL25A1-201ENST00000399126 NSUN4Q96CB9 384 aaKnown RBP17.87■□□□□ 0.45
COL25A1-201ENST00000399126 RIOK1Q9BRS2 568 aaKnown RBP17.87■□□□□ 0.45
COL25A1-201ENST00000399126 BRIP1Q9BX63 1249 aa17.87■□□□□ 0.45
COL25A1-201ENST00000399126 AGXT2Q9BYV1 514 aa17.87■□□□□ 0.45
COL25A1-201ENST00000399126 NAPBQ9H115 298 aa17.87■□□□□ 0.45
COL25A1-201ENST00000399126 PRDM16Q9HAZ2 1276 aa17.87■□□□□ 0.45
COL25A1-201ENST00000399126 NEDD4P46934 1319 aa17.87■□□□□ 0.45
COL25A1-201ENST00000399126 FLAD1Q8NFF5 587 aa17.87■□□□□ 0.45
COL25A1-201ENST00000399126 IPO4Q8TEX9 1081 aaKnown RBP17.87■□□□□ 0.45
COL25A1-201ENST00000399126 MAGEB6P1A0A0J9YX57 407 aa17.86■□□□□ 0.45
COL25A1-201ENST00000399126 PRC1O43663 620 aa17.86■□□□□ 0.45
COL25A1-201ENST00000399126 SRGNP10124 158 aa17.86■□□□□ 0.45
COL25A1-201ENST00000399126 DEFB132Q7Z7B7 95 aa17.86■□□□□ 0.45
COL25A1-201ENST00000399126 NCOA7Q8NI08 942 aa17.86■□□□□ 0.45
COL25A1-201ENST00000399126 CRAMP1Q96RY5 1269 aa17.86■□□□□ 0.45
COL25A1-201ENST00000399126 NCOA5Q9HCD5 579 aaKnown RBP17.86■□□□□ 0.45
COL25A1-201ENST00000399126 RRAGDQ9NQL2 400 aaPredicted RBP17.86■□□□□ 0.45
COL25A1-201ENST00000399126 PARP3Q9Y6F1 533 aa17.86■□□□□ 0.45
COL25A1-201ENST00000399126 STX6O43752 255 aa17.86■□□□□ 0.45
COL25A1-201ENST00000399126 BBOX1O75936 387 aa17.86■□□□□ 0.45
COL25A1-201ENST00000399126 CCT2P78371 535 aaKnown RBP17.86■□□□□ 0.45
COL25A1-201ENST00000399126 SLC15A2Q16348 729 aa17.86■□□□□ 0.45
COL25A1-201ENST00000399126 RAB11FIP4Q86YS3 637 aa17.86■□□□□ 0.45
COL25A1-201ENST00000399126 PSMD1Q99460 953 aa17.86■□□□□ 0.45
COL25A1-201ENST00000399126 B4E1Z4 1266 aa17.85■□□□□ 0.45
COL25A1-201ENST00000399126 HMGB2P26583 209 aaKnown RBP17.85■□□□□ 0.45
COL25A1-201ENST00000399126 TDO2P48775 406 aa17.85■□□□□ 0.45
COL25A1-201ENST00000399126 ALX1Q15699 326 aa17.85■□□□□ 0.45
COL25A1-201ENST00000399126 CYB5R4Q7L1T6 521 aa17.85■□□□□ 0.45
COL25A1-201ENST00000399126 RALYLQ86SE5 291 aaKnown RBP17.85■□□□□ 0.45
COL25A1-201ENST00000399126 GGA1Q9UJY5 639 aa17.85■□□□□ 0.45
COL25A1-201ENST00000399126 LTBP1Q14766 1721 aa17.85■□□□□ 0.45
COL25A1-201ENST00000399126 CCDC88AQ3V6T2 1871 aa17.85■□□□□ 0.45
COL25A1-201ENST00000399126 LRRC37AA6NMS7 1700 aa17.85■□□□□ 0.45
COL25A1-201ENST00000399126 PPEF1O14829 653 aaPredicted RBP17.85■□□□□ 0.45
COL25A1-201ENST00000399126 TBC1D16Q8TBP0 767 aa17.85■□□□□ 0.45
COL25A1-201ENST00000399126 UTRNP46939 3433 aa17.85■□□□□ 0.45
COL25A1-201ENST00000399126 WDR33Q9C0J8 1336 aaKnown RBP17.85■□□□□ 0.45
COL25A1-201ENST00000399126 MCM5P33992 734 aa17.85■□□□□ 0.45
COL25A1-201ENST00000399126 TDRD7Q8NHU6 1098 aaKnown RBP17.85■□□□□ 0.45
COL25A1-201ENST00000399126 PDS5AQ29RF7 1337 aaKnown RBP17.84■□□□□ 0.45
COL25A1-201ENST00000399126 AATFQ9NY61 560 aaKnown RBP eCLIP17.84■□□□□ 0.45
COL25A1-201ENST00000399126 EVX2Q03828 476 aa17.84■□□□□ 0.45
COL25A1-201ENST00000399126 DDX11Q96FC9 970 aa17.84■□□□□ 0.45
COL25A1-201ENST00000399126 SENP2Q9HC62 589 aa17.84■□□□□ 0.45
COL25A1-201ENST00000399126 MTMR6Q9Y217 621 aa17.84■□□□□ 0.45
COL25A1-201ENST00000399126 CYP2D7A0A087X1C5 515 aa17.83■□□□□ 0.44
COL25A1-201ENST00000399126 C6orf229H3BNL8 230 aa17.83■□□□□ 0.44
COL25A1-201ENST00000399126 PFKFB2O60825 505 aa17.83■□□□□ 0.44
COL25A1-201ENST00000399126 ZSCAN22P10073 491 aaPredicted RBP17.83■□□□□ 0.44
COL25A1-201ENST00000399126 PDIA3P30101 505 aaKnown RBP17.83■□□□□ 0.44
COL25A1-201ENST00000399126 ZNF804AQ7Z570 1209 aa17.83■□□□□ 0.44
COL25A1-201ENST00000399126 GDPD2Q9HCC8 539 aa17.83■□□□□ 0.44
COL25A1-201ENST00000399126 ZMYM6O95789 1325 aa17.83■□□□□ 0.44
COL25A1-201ENST00000399126 VPS37CA5D8V6 355 aaPredicted RBP17.83■□□□□ 0.44
COL25A1-201ENST00000399126 CTDNEP1O95476 244 aa17.83■□□□□ 0.44
COL25A1-201ENST00000399126 GNAT2P19087 354 aa17.83■□□□□ 0.44
COL25A1-201ENST00000399126 ATP2B4P23634 1241 aa17.83■□□□□ 0.44
COL25A1-201ENST00000399126 CD209Q9NNX6 404 aa17.83■□□□□ 0.44
COL25A1-201ENST00000399126 LMBRD1Q9NUN5 540 aa17.83■□□□□ 0.44
COL25A1-201ENST00000399126 PRPF40AO75400 957 aaKnown RBP17.82■□□□□ 0.44
COL25A1-201ENST00000399126 TRDNQ13061 729 aa17.82■□□□□ 0.44
COL25A1-201ENST00000399126 DIXDC1Q155Q3 683 aa17.82■□□□□ 0.44
COL25A1-201ENST00000399126 NACAP1Q9BZK3 213 aa17.82■□□□□ 0.44
COL25A1-201ENST00000399126 MAST2Q6P0Q8 1798 aa17.81■□□□□ 0.44
COL25A1-201ENST00000399126 MINDY4BA8MYZ0 360 aa17.81■□□□□ 0.44
COL25A1-201ENST00000399126 GOLGA6L22H0YM25 854 aa17.81■□□□□ 0.44
COL25A1-201ENST00000399126 RIMBP2O15034 1052 aa17.81■□□□□ 0.44
COL25A1-201ENST00000399126 NPR1P16066 1061 aa17.81■□□□□ 0.44
COL25A1-201ENST00000399126 LARP1BQ659C4 914 aaKnown RBP17.81■□□□□ 0.44
COL25A1-201ENST00000399126 C15orf52Q6ZUT6 534 aaKnown RBP17.81■□□□□ 0.44
COL25A1-201ENST00000399126 CDC37L1Q7L3B6 337 aa17.81■□□□□ 0.44
COL25A1-201ENST00000399126 STK32BQ9NY57 414 aa17.81■□□□□ 0.44
COL25A1-201ENST00000399126 ATP6V0A2Q9Y487 856 aa17.81■□□□□ 0.44
COL25A1-201ENST00000399126 DUOX1Q9NRD9 1551 aa17.81■□□□□ 0.44
COL25A1-201ENST00000399126 TIAM2Q8IVF5 1701 aa17.81■□□□□ 0.44
COL25A1-201ENST00000399126 RRP12Q5JTH9 1297 aaKnown RBP17.81■□□□□ 0.44
COL25A1-201ENST00000399126 DZIP1Q86YF9 867 aaKnown RBP17.81■□□□□ 0.44
COL25A1-201ENST00000399126 KLF18A0A0U1RQI7 1052 aa17.8■□□□□ 0.44
COL25A1-201ENST00000399126 KDM4AO75164 1064 aa17.8■□□□□ 0.44
COL25A1-201ENST00000399126 F13A1P00488 732 aa17.8■□□□□ 0.44
COL25A1-201ENST00000399126 FERMT3Q86UX7 667 aa17.8■□□□□ 0.44
COL25A1-201ENST00000399126 SP8Q8IXZ3 490 aa17.8■□□□□ 0.44
COL25A1-201ENST00000399126 NSUN7Q8NE18 718 aaKnown RBP17.8■□□□□ 0.44
COL25A1-201ENST00000399126 ZNF622Q969S3 477 aaKnown RBP eCLIP17.8■□□□□ 0.44
COL25A1-201ENST00000399126 PDE6BP35913 854 aa17.8■□□□□ 0.44
COL25A1-201ENST00000399126 AKNAD1Q5T1N1 836 aa17.8■□□□□ 0.44
COL25A1-201ENST00000399126 FBXL16Q8N461 479 aa17.8■□□□□ 0.44
COL25A1-201ENST00000399126 RNF216Q9NWF9 866 aaPredicted RBP17.8■□□□□ 0.44
COL25A1-201ENST00000399126 HPS5Q9UPZ3 1129 aa17.8■□□□□ 0.44
COL25A1-201ENST00000399126 CHRNA5P30532 468 aa17.79■□□□□ 0.44
COL25A1-201ENST00000399126 FOSBP53539 338 aa17.79■□□□□ 0.44
COL25A1-201ENST00000399126 PPARAQ07869 468 aa17.79■□□□□ 0.44
COL25A1-201ENST00000399126 FAM43BQ6ZT52 329 aaPredicted RBP17.79■□□□□ 0.44
COL25A1-201ENST00000399126 TOMM22Q9NS69 142 aa17.79■□□□□ 0.44
COL25A1-201ENST00000399126 ZSWIM5Q9P217 1185 aa17.79■□□□□ 0.44
COL25A1-201ENST00000399126 MYH2Q9UKX2 1941 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms