RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 TRPM2O94759 1503 aa10.55□□□□□ -0.72
CDH23-203ENST00000398788 GOLGA6CA6NDK9 693 aa10.55□□□□□ -0.72
CDH23-203ENST00000398788 ZBTB7BO15156 539 aaPredicted RBP10.55□□□□□ -0.72
CDH23-203ENST00000398788 NR1I2O75469 434 aa10.55□□□□□ -0.72
CDH23-203ENST00000398788 HMGB1P09429 215 aaKnown RBP10.55□□□□□ -0.72
CDH23-203ENST00000398788 GOLGA6DP0CG33 693 aa10.55□□□□□ -0.72
CDH23-203ENST00000398788 HNRNPH1P31943 449 aaKnown RBP10.55□□□□□ -0.72
CDH23-203ENST00000398788 SSRP1Q08945 709 aaKnown RBP10.55□□□□□ -0.72
CDH23-203ENST00000398788 SPTY2D1Q68D10 685 aaPredicted RBP10.55□□□□□ -0.72
CDH23-203ENST00000398788 CLSTN2Q9H4D0 955 aa10.55□□□□□ -0.72
CDH23-203ENST00000398788 GOLGA6AQ9NYA3 693 aa10.55□□□□□ -0.72
CDH23-203ENST00000398788 FAM169AQ9Y6X4 670 aa10.55□□□□□ -0.72
CDH23-203ENST00000398788 H2AFXP16104 143 aaPredicted RBP10.54□□□□□ -0.72
CDH23-203ENST00000398788 MARCKSP29966 332 aaPredicted RBP10.54□□□□□ -0.72
CDH23-203ENST00000398788 METAP2P50579 478 aaKnown RBP eCLIP10.54□□□□□ -0.72
CDH23-203ENST00000398788 ATP8B2P98198 1209 aa10.54□□□□□ -0.72
CDH23-203ENST00000398788 SLC9C2Q5TAH2 1124 aa10.54□□□□□ -0.72
CDH23-203ENST00000398788 TTC6Q86TZ1 520 aa10.54□□□□□ -0.72
CDH23-203ENST00000398788 ARHGAP45Q92619 1136 aa10.54□□□□□ -0.72
CDH23-203ENST00000398788 A0A1W2PP64 1363 aa10.54□□□□□ -0.72
CDH23-203ENST00000398788 GOLGA6L9A6NEM1 432 aa10.54□□□□□ -0.72
CDH23-203ENST00000398788 PAX7P23759 505 aa10.54□□□□□ -0.72
CDH23-203ENST00000398788 HOXC9P31274 260 aa10.54□□□□□ -0.72
CDH23-203ENST00000398788 MATR3P43243 847 aaKnown RBP eCLIP10.54□□□□□ -0.72
CDH23-203ENST00000398788 BRD3Q15059 726 aa10.54□□□□□ -0.72
CDH23-203ENST00000398788 FKBP15Q5T1M5 1219 aa10.54□□□□□ -0.72
CDH23-203ENST00000398788 CCDC121Q6ZUS5 278 aa10.54□□□□□ -0.72
CDH23-203ENST00000398788 RPUSD2Q8IZ73 545 aaKnown RBP10.54□□□□□ -0.72
CDH23-203ENST00000398788 KIRREL3Q8IZU9 778 aa10.54□□□□□ -0.72
CDH23-203ENST00000398788 XPO4Q9C0E2 1151 aaKnown RBP10.54□□□□□ -0.72
CDH23-203ENST00000398788 MRFAP1Q9Y605 127 aa10.54□□□□□ -0.72
CDH23-203ENST00000398788 RXRAP19793 462 aa10.54□□□□□ -0.72
CDH23-203ENST00000398788 KSR2Q6VAB6 950 aa10.54□□□□□ -0.72
CDH23-203ENST00000398788 MFSD6Q6ZSS7 791 aa10.54□□□□□ -0.72
CDH23-203ENST00000398788 TDRD7Q8NHU6 1098 aaKnown RBP10.54□□□□□ -0.72
CDH23-203ENST00000398788 ANAPC15P60006 121 aa10.54□□□□□ -0.72
CDH23-203ENST00000398788 TIMM10P62072 90 aa10.54□□□□□ -0.72
CDH23-203ENST00000398788 FAM160A1Q05DH4 1040 aa10.54□□□□□ -0.72
CDH23-203ENST00000398788 ZKSCAN8Q15776 578 aaPredicted RBP10.54□□□□□ -0.72
CDH23-203ENST00000398788 CATIPQ7Z7H3 387 aa10.54□□□□□ -0.72
CDH23-203ENST00000398788 LUC7LQ9NQ29 371 aaKnown RBP10.54□□□□□ -0.72
CDH23-203ENST00000398788 CEP131Q9UPN4 1083 aa10.54□□□□□ -0.72
CDH23-203ENST00000398788 ENO4A6NNW6 628 aa10.53□□□□□ -0.72
CDH23-203ENST00000398788 RNF40O75150 1001 aa10.53□□□□□ -0.72
CDH23-203ENST00000398788 ZNF569Q5MCW4 686 aa10.53□□□□□ -0.72
CDH23-203ENST00000398788 CEP85Q6P2H3 762 aa10.53□□□□□ -0.72
CDH23-203ENST00000398788 CDC5LQ99459 802 aaKnown RBP10.53□□□□□ -0.72
CDH23-203ENST00000398788 GNGT1P63211 74 aa10.53□□□□□ -0.72
CDH23-203ENST00000398788 PTPN21Q16825 1174 aa10.53□□□□□ -0.72
CDH23-203ENST00000398788 NBPF6Q5VWK0 638 aa10.53□□□□□ -0.72
CDH23-203ENST00000398788 NBPF5PQ86XG9 351 aaPredicted RBP10.53□□□□□ -0.72
CDH23-203ENST00000398788 FAM71BQ8TC56 605 aa10.53□□□□□ -0.72
CDH23-203ENST00000398788 DDX17Q92841 729 aaKnown RBP10.53□□□□□ -0.72
CDH23-203ENST00000398788 TBC1D31Q96DN5 1066 aa10.53□□□□□ -0.72
CDH23-203ENST00000398788 DCAF5Q96JK2 942 aa10.53□□□□□ -0.72
CDH23-203ENST00000398788 NBPF4Q96M43 638 aa10.53□□□□□ -0.72
CDH23-203ENST00000398788 B4GALNT4Q76KP1 1039 aa10.53□□□□□ -0.72
CDH23-203ENST00000398788 NCOA7Q8NI08 942 aa10.53□□□□□ -0.72
CDH23-203ENST00000398788 RNF41Q9H4P4 317 aaPredicted RBP10.53□□□□□ -0.72
CDH23-203ENST00000398788 ARHGEF40Q8TER5 1519 aa10.53□□□□□ -0.72
CDH23-203ENST00000398788 ANKRD62A6NC57 917 aa10.52□□□□□ -0.72
CDH23-203ENST00000398788 BUB1BO60566 1050 aaPredicted RBP10.52□□□□□ -0.72
CDH23-203ENST00000398788 SKAP2O75563 359 aaPredicted RBP10.52□□□□□ -0.72
CDH23-203ENST00000398788 CYP7A1P22680 504 aa10.52□□□□□ -0.72
CDH23-203ENST00000398788 UBA7P41226 1012 aa10.52□□□□□ -0.72
CDH23-203ENST00000398788 AFMP43652 599 aa10.52□□□□□ -0.72
CDH23-203ENST00000398788 GOLGA8FQ08AF8 430 aa10.52□□□□□ -0.72
CDH23-203ENST00000398788 GOLGA8DPQ0D2H9 430 aa10.52□□□□□ -0.72
CDH23-203ENST00000398788 TDRD12Q587J7 1177 aaKnown RBP10.52□□□□□ -0.72
CDH23-203ENST00000398788 TCERG1LQ5VWI1 586 aa10.52□□□□□ -0.72
CDH23-203ENST00000398788 CACNA2D4Q7Z3S7 1137 aa10.52□□□□□ -0.72
CDH23-203ENST00000398788 ARMC2Q8NEN0 867 aa10.52□□□□□ -0.72
CDH23-203ENST00000398788 SGSM3Q96HU1 749 aa10.52□□□□□ -0.72
CDH23-203ENST00000398788 DCTPP1Q9H773 170 aa10.52□□□□□ -0.72
CDH23-203ENST00000398788 BAIAP2L1Q9UHR4 511 aa10.52□□□□□ -0.72
CDH23-203ENST00000398788 NDUFB9Q9Y6M9 179 aa10.52□□□□□ -0.72
CDH23-203ENST00000398788 CAND2O75155 1236 aa10.52□□□□□ -0.73
CDH23-203ENST00000398788 NMIQ13287 307 aaPredicted RBP10.52□□□□□ -0.73
CDH23-203ENST00000398788 LINS1Q8NG48 757 aa10.52□□□□□ -0.73
CDH23-203ENST00000398788 RABGGTAQ92696 567 aa10.52□□□□□ -0.73
CDH23-203ENST00000398788 UNC13BO14795 1591 aa10.52□□□□□ -0.73
CDH23-203ENST00000398788 PLEKHG2Q9H7P9 1386 aa10.52□□□□□ -0.73
CDH23-203ENST00000398788 GOLGA6L10A6NI86 522 aa10.52□□□□□ -0.73
CDH23-203ENST00000398788 CHUKO15111 745 aa10.52□□□□□ -0.73
CDH23-203ENST00000398788 TBC1D8O95759 1140 aa10.52□□□□□ -0.73
CDH23-203ENST00000398788 MSL1Q68DK7 614 aa10.52□□□□□ -0.73
CDH23-203ENST00000398788 Q6ZUG5 572 aa10.52□□□□□ -0.73
CDH23-203ENST00000398788 MIGA1Q8NAN2 632 aa10.52□□□□□ -0.73
CDH23-203ENST00000398788 ZNF287Q9HBT7 754 aa10.52□□□□□ -0.73
CDH23-203ENST00000398788 G3BP2Q9UN86 482 aaKnown RBP10.52□□□□□ -0.73
CDH23-203ENST00000398788 ASXL1Q8IXJ9 1541 aa10.52□□□□□ -0.73
CDH23-203ENST00000398788 CCDC151A5D8V7 595 aa10.52□□□□□ -0.73
CDH23-203ENST00000398788 IRX1P78414 480 aaPredicted RBP10.52□□□□□ -0.73
CDH23-203ENST00000398788 C11orf57Q6ZUT1 292 aaPredicted RBP10.52□□□□□ -0.73
CDH23-203ENST00000398788 PLA2G4DQ86XP0 818 aa10.52□□□□□ -0.73
CDH23-203ENST00000398788 HINFPQ9BQA5 517 aa10.52□□□□□ -0.73
CDH23-203ENST00000398788 NIP7Q9Y221 180 aaKnown RBP eCLIP10.52□□□□□ -0.73
CDH23-203ENST00000398788 PLEKHG3A1L390 1219 aa10.51□□□□□ -0.73
CDH23-203ENST00000398788 MACROD2A1Z1Q3 448 aa10.51□□□□□ -0.73
CDH23-203ENST00000398788 TMCO5BA8MYB1 307 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms