RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 LEO1Q8WVC0 666 aaPredicted RBP13.23□□□□□ -0.29
TMF1-201ENST00000398559 SETDB2Q96T68 719 aa13.22□□□□□ -0.29
TMF1-201ENST00000398559 KRT5P13647 590 aa13.22□□□□□ -0.29
TMF1-201ENST00000398559 ZCRB1Q8TBF4 217 aaKnown RBP13.22□□□□□ -0.29
TMF1-201ENST00000398559 UTP11Q9Y3A2 253 aaKnown RBP13.22□□□□□ -0.29
TMF1-201ENST00000398559 EPB41P11171 864 aaKnown RBP13.22□□□□□ -0.29
TMF1-201ENST00000398559 INPP5BP32019 993 aa13.22□□□□□ -0.29
TMF1-201ENST00000398559 ATP6V1AP38606 617 aa13.22□□□□□ -0.29
TMF1-201ENST00000398559 TUBB2AQ13885 445 aa13.22□□□□□ -0.29
TMF1-201ENST00000398559 HELBQ8NG08 1087 aaPredicted RBP13.22□□□□□ -0.29
TMF1-201ENST00000398559 TUBB2BQ9BVA1 445 aa13.22□□□□□ -0.29
TMF1-201ENST00000398559 HELLSQ9NRZ9 838 aa13.22□□□□□ -0.29
TMF1-201ENST00000398559 FRMD4BQ9Y2L6 1034 aa13.22□□□□□ -0.29
TMF1-201ENST00000398559 SYNRGQ9UMZ2 1314 aa13.22□□□□□ -0.29
TMF1-201ENST00000398559 PDE4DQ08499 809 aa13.22□□□□□ -0.29
TMF1-201ENST00000398559 SEPT6Q14141 434 aa13.22□□□□□ -0.29
TMF1-201ENST00000398559 MSANTD4Q8NCY6 345 aa13.22□□□□□ -0.29
TMF1-201ENST00000398559 LINS1Q8NG48 757 aa13.22□□□□□ -0.29
TMF1-201ENST00000398559 SLC27A2O14975 620 aa13.22□□□□□ -0.29
TMF1-201ENST00000398559 RPL13P26373 211 aaKnown RBP13.22□□□□□ -0.29
TMF1-201ENST00000398559 ANO1Q5XXA6 986 aa13.22□□□□□ -0.29
TMF1-201ENST00000398559 GPR161Q8N6U8 529 aaKnown RBP13.22□□□□□ -0.29
TMF1-201ENST00000398559 MRRFQ96E11 262 aaKnown RBP13.22□□□□□ -0.29
TMF1-201ENST00000398559 NIP7Q9Y221 180 aaKnown RBP eCLIP13.22□□□□□ -0.29
TMF1-201ENST00000398559 LETM2Q2VYF4 491 aa13.21□□□□□ -0.29
TMF1-201ENST00000398559 SMC1BQ8NDV3 1235 aa13.21□□□□□ -0.29
TMF1-201ENST00000398559 KIAA1524Q8TCG1 905 aa13.21□□□□□ -0.29
TMF1-201ENST00000398559 MAPK8IP1Q9UQF2 711 aa13.21□□□□□ -0.29
TMF1-201ENST00000398559 POLR3AO14802 1390 aaPredicted RBP13.21□□□□□ -0.29
TMF1-201ENST00000398559 BUB1BO60566 1050 aaPredicted RBP13.21□□□□□ -0.29
TMF1-201ENST00000398559 KCNH3Q9ULD8 1083 aa13.21□□□□□ -0.29
TMF1-201ENST00000398559 ZWINTO95229 277 aa13.21□□□□□ -0.29
TMF1-201ENST00000398559 PPARDQ03181 441 aa13.21□□□□□ -0.29
TMF1-201ENST00000398559 CCDC14Q49A88 953 aa13.21□□□□□ -0.29
TMF1-201ENST00000398559 ODF2LQ9ULJ1 636 aa13.21□□□□□ -0.29
TMF1-201ENST00000398559 SPOPO43791 374 aa13.21□□□□□ -0.3
TMF1-201ENST00000398559 PCK1P35558 622 aa13.21□□□□□ -0.3
TMF1-201ENST00000398559 LONRF3Q496Y0 759 aa13.21□□□□□ -0.3
TMF1-201ENST00000398559 NLRP3Q96P20 1036 aa13.21□□□□□ -0.3
TMF1-201ENST00000398559 ASIC2Q16515 512 aa13.21□□□□□ -0.3
TMF1-201ENST00000398559 PAXIP1Q6ZW49 1069 aaPredicted RBP13.21□□□□□ -0.3
TMF1-201ENST00000398559 IFT20Q8IY31 132 aa13.21□□□□□ -0.3
TMF1-201ENST00000398559 NGLY1Q96IV0 654 aa13.21□□□□□ -0.3
TMF1-201ENST00000398559 AGTPBP1Q9UPW5 1226 aa13.21□□□□□ -0.3
TMF1-201ENST00000398559 POLR2DO15514 142 aaKnown RBP13.2□□□□□ -0.3
TMF1-201ENST00000398559 TNFAIP3P21580 790 aa13.2□□□□□ -0.3
TMF1-201ENST00000398559 FYB2Q5VWT5 728 aa13.2□□□□□ -0.3
TMF1-201ENST00000398559 INF2Q27J81 1249 aa13.2□□□□□ -0.3
TMF1-201ENST00000398559 POTEDQ86YR6 584 aa13.2□□□□□ -0.3
TMF1-201ENST00000398559 CCDC110Q8TBZ0 833 aa13.2□□□□□ -0.3
TMF1-201ENST00000398559 GBP1P32455 592 aa13.2□□□□□ -0.3
TMF1-201ENST00000398559 WDR66Q8TBY9 1149 aa13.2□□□□□ -0.3
TMF1-201ENST00000398559 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.2□□□□□ -0.3
TMF1-201ENST00000398559 SNX14Q9Y5W7 946 aa13.2□□□□□ -0.3
TMF1-201ENST00000398559 A0A1B0GUA9 196 aa13.2□□□□□ -0.3
TMF1-201ENST00000398559 CA8P35219 290 aa13.2□□□□□ -0.3
TMF1-201ENST00000398559 PLCD1P51178 756 aa13.2□□□□□ -0.3
TMF1-201ENST00000398559 VWA3BQ502W6 1294 aa13.2□□□□□ -0.3
TMF1-201ENST00000398559 ACSBG1Q96GR2 724 aa13.2□□□□□ -0.3
TMF1-201ENST00000398559 PARP1P09874 1014 aaKnown RBP13.2□□□□□ -0.3
TMF1-201ENST00000398559 FMNL3Q8IVF7 1028 aa13.2□□□□□ -0.3
TMF1-201ENST00000398559 IMPACTQ9P2X3 320 aa13.2□□□□□ -0.3
TMF1-201ENST00000398559 B4E1Z4 1266 aa13.19□□□□□ -0.3
TMF1-201ENST00000398559 GADD45BO75293 160 aaPredicted RBP13.19□□□□□ -0.3
TMF1-201ENST00000398559 CEBPAP49715 358 aaPredicted RBP13.19□□□□□ -0.3
TMF1-201ENST00000398559 NLRP12P59046 1061 aa13.19□□□□□ -0.3
TMF1-201ENST00000398559 NEDD9Q14511 834 aa13.19□□□□□ -0.3
TMF1-201ENST00000398559 SECISBP2LQ93073 1101 aaKnown RBP13.19□□□□□ -0.3
TMF1-201ENST00000398559 ERCC5P28715 1186 aaPredicted RBP13.19□□□□□ -0.3
TMF1-201ENST00000398559 CNNM4Q6P4Q7 775 aa13.19□□□□□ -0.3
TMF1-201ENST00000398559 CACNA2D3Q8IZS8 1091 aa13.19□□□□□ -0.3
TMF1-201ENST00000398559 ACTN4O43707 911 aaKnown RBP13.19□□□□□ -0.3
TMF1-201ENST00000398559 PPP1R2P41236 205 aa13.19□□□□□ -0.3
TMF1-201ENST00000398559 RILPL1Q5EBL4 403 aa13.19□□□□□ -0.3
TMF1-201ENST00000398559 RPUSD2Q8IZ73 545 aaKnown RBP13.19□□□□□ -0.3
TMF1-201ENST00000398559 HGSO14964 777 aaPredicted RBP13.19□□□□□ -0.3
TMF1-201ENST00000398559 OAS2P29728 719 aaKnown RBP13.19□□□□□ -0.3
TMF1-201ENST00000398559 FAM173BQ6P4H8 233 aa13.19□□□□□ -0.3
TMF1-201ENST00000398559 LMNTD2Q8IXW0 634 aa13.19□□□□□ -0.3
TMF1-201ENST00000398559 KIFAP3Q92845 792 aa13.19□□□□□ -0.3
TMF1-201ENST00000398559 TRIM31Q9BZY9 425 aa13.19□□□□□ -0.3
TMF1-201ENST00000398559 GOLGA6BA6NDN3 693 aa13.19□□□□□ -0.3
TMF1-201ENST00000398559 MBD4O95243 580 aa13.19□□□□□ -0.3
TMF1-201ENST00000398559 ZNF445P59923 1031 aa13.19□□□□□ -0.3
TMF1-201ENST00000398559 PPP1R21Q6ZMI0 780 aa13.19□□□□□ -0.3
TMF1-201ENST00000398559 HDAC9Q9UKV0 1011 aa13.19□□□□□ -0.3
TMF1-201ENST00000398559 IRS4O14654 1257 aaPredicted RBP13.19□□□□□ -0.3
TMF1-201ENST00000398559 ZBTB7BO15156 539 aaPredicted RBP13.19□□□□□ -0.3
TMF1-201ENST00000398559 KRT9P35527 623 aa13.19□□□□□ -0.3
TMF1-201ENST00000398559 CLNS1AP54105 237 aaKnown RBP13.19□□□□□ -0.3
TMF1-201ENST00000398559 GKAP1Q5VSY0 366 aaPredicted RBP13.19□□□□□ -0.3
TMF1-201ENST00000398559 PIK3AP1Q6ZUJ8 805 aa13.19□□□□□ -0.3
TMF1-201ENST00000398559 PLCD3Q8N3E9 789 aa13.19□□□□□ -0.3
TMF1-201ENST00000398559 OTUD7AQ8TE49 926 aaPredicted RBP13.19□□□□□ -0.3
TMF1-201ENST00000398559 NOX5Q96PH1 765 aa13.19□□□□□ -0.3
TMF1-201ENST00000398559 NCOA5Q9HCD5 579 aaKnown RBP13.19□□□□□ -0.3
TMF1-201ENST00000398559 POLKQ9UBT6 870 aa13.19□□□□□ -0.3
TMF1-201ENST00000398559 CCNT1O60563 726 aaKnown RBP13.18□□□□□ -0.3
TMF1-201ENST00000398559 GABPB1Q06547 395 aaPredicted RBP13.18□□□□□ -0.3
TMF1-201ENST00000398559 PAK1Q13153 545 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms