RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 TMEM165Q9HC07 324 aa14.32□□□□□ -0.12
CCBE1-201ENST00000398179 FAM9CQ8IZT9 166 aa14.32□□□□□ -0.12
CCBE1-201ENST00000398179 B4GALNT2Q8NHY0 566 aa14.32□□□□□ -0.12
CCBE1-201ENST00000398179 ARHGEF2Q92974 986 aaKnown RBP14.32□□□□□ -0.12
CCBE1-201ENST00000398179 BAIAP2L1Q9UHR4 511 aa14.32□□□□□ -0.12
CCBE1-201ENST00000398179 PDHA1P08559 390 aa14.31□□□□□ -0.12
CCBE1-201ENST00000398179 TTLL12Q14166 644 aaPredicted RBP14.31□□□□□ -0.12
CCBE1-201ENST00000398179 NUDCD3Q8IVD9 361 aa14.31□□□□□ -0.12
CCBE1-201ENST00000398179 CEP131Q9UPN4 1083 aa14.31□□□□□ -0.12
CCBE1-201ENST00000398179 FSCBQ5H9T9 825 aa14.31□□□□□ -0.12
CCBE1-201ENST00000398179 MAP3K21Q5TCX8 1036 aa14.31□□□□□ -0.12
CCBE1-201ENST00000398179 NECTIN2Q92692 538 aa14.31□□□□□ -0.12
CCBE1-201ENST00000398179 TSKSQ9UJT2 592 aa14.31□□□□□ -0.12
CCBE1-201ENST00000398179 RFWD2Q8NHY2 731 aa14.31□□□□□ -0.12
CCBE1-201ENST00000398179 LRRC45Q96CN5 670 aa14.31□□□□□ -0.12
CCBE1-201ENST00000398179 CCDC14Q49A88 953 aa14.31□□□□□ -0.12
CCBE1-201ENST00000398179 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.31□□□□□ -0.12
CCBE1-201ENST00000398179 POLR3CQ9BUI4 534 aaPredicted RBP14.31□□□□□ -0.12
CCBE1-201ENST00000398179 RAD21L1Q9H4I0 556 aa14.31□□□□□ -0.12
CCBE1-201ENST00000398179 KCNG1Q9UIX4 513 aa14.31□□□□□ -0.12
CCBE1-201ENST00000398179 NEK4P51957 841 aa14.3□□□□□ -0.12
CCBE1-201ENST00000398179 PDE1BQ01064 536 aa14.3□□□□□ -0.12
CCBE1-201ENST00000398179 ADCY2Q08462 1091 aa14.3□□□□□ -0.12
CCBE1-201ENST00000398179 ZNF394Q53GI3 561 aa14.3□□□□□ -0.12
CCBE1-201ENST00000398179 CCDC122Q5T0U0 273 aa14.3□□□□□ -0.12
CCBE1-201ENST00000398179 RAD51AP2Q09MP3 1159 aa14.3□□□□□ -0.12
CCBE1-201ENST00000398179 DHX58Q96C10 678 aa14.3□□□□□ -0.12
CCBE1-201ENST00000398179 MRPL40Q9NQ50 206 aaKnown RBP14.3□□□□□ -0.12
CCBE1-201ENST00000398179 TLK1Q9UKI8 766 aa14.3□□□□□ -0.12
CCBE1-201ENST00000398179 VIL1P09327 827 aaKnown RBP14.3□□□□□ -0.12
CCBE1-201ENST00000398179 PHEXP78562 749 aa14.3□□□□□ -0.12
CCBE1-201ENST00000398179 UBL4BQ8N7F7 174 aa14.3□□□□□ -0.12
CCBE1-201ENST00000398179 TSC1Q92574 1164 aa14.3□□□□□ -0.12
CCBE1-201ENST00000398179 DNAJC17Q9NVM6 304 aaKnown RBP14.3□□□□□ -0.12
CCBE1-201ENST00000398179 GCC1Q96CN9 775 aa14.3□□□□□ -0.12
CCBE1-201ENST00000398179 VCPKMTQ9H867 229 aa14.3□□□□□ -0.12
CCBE1-201ENST00000398179 OPHN1O60890 802 aa14.29□□□□□ -0.12
CCBE1-201ENST00000398179 KRT17Q04695 432 aa14.29□□□□□ -0.12
CCBE1-201ENST00000398179 CEP85Q6P2H3 762 aa14.29□□□□□ -0.12
CCBE1-201ENST00000398179 CCDC129Q6ZRS4 1044 aa14.29□□□□□ -0.12
CCBE1-201ENST00000398179 FGD4Q96M96 766 aa14.29□□□□□ -0.12
CCBE1-201ENST00000398179 ATP6V1HQ9UI12 483 aa14.29□□□□□ -0.12
CCBE1-201ENST00000398179 DDX41Q9UJV9 622 aaKnown RBP14.29□□□□□ -0.12
CCBE1-201ENST00000398179 ATP8A1Q9Y2Q0 1164 aa14.29□□□□□ -0.12
CCBE1-201ENST00000398179 S100A1P23297 94 aa14.29□□□□□ -0.12
CCBE1-201ENST00000398179 SYCP3Q8IZU3 236 aa14.29□□□□□ -0.12
CCBE1-201ENST00000398179 ARHGAP24Q8N264 748 aa14.29□□□□□ -0.12
CCBE1-201ENST00000398179 RPAP3Q9H6T3 665 aaPredicted RBP14.29□□□□□ -0.12
CCBE1-201ENST00000398179 TADA3O75528 432 aa14.29□□□□□ -0.12
CCBE1-201ENST00000398179 EIF2S1P05198 315 aaKnown RBP14.29□□□□□ -0.12
CCBE1-201ENST00000398179 PIP4K2AP48426 406 aaPredicted RBP14.29□□□□□ -0.12
CCBE1-201ENST00000398179 SAFBQ15424 915 aaKnown RBP eCLIP14.29□□□□□ -0.12
CCBE1-201ENST00000398179 OLFM3Q96PB7 478 aa14.29□□□□□ -0.12
CCBE1-201ENST00000398179 RHBDL2Q9NX52 303 aa14.29□□□□□ -0.12
CCBE1-201ENST00000398179 PDZRN3Q9UPQ7 1066 aa14.29□□□□□ -0.12
CCBE1-201ENST00000398179 GOLGA8RI6L899 631 aa14.29□□□□□ -0.12
CCBE1-201ENST00000398179 MGARPQ8TDB4 240 aa14.29□□□□□ -0.12
CCBE1-201ENST00000398179 STAM2O75886 525 aa14.29□□□□□ -0.12
CCBE1-201ENST00000398179 TMC6Q7Z403 805 aa14.29□□□□□ -0.12
CCBE1-201ENST00000398179 TMEM110Q86TL2 294 aa14.29□□□□□ -0.12
CCBE1-201ENST00000398179 TEX9Q8N6V9 391 aa14.29□□□□□ -0.12
CCBE1-201ENST00000398179 SYNPO2Q9UMS6 1093 aa14.29□□□□□ -0.12
CCBE1-201ENST00000398179 CPLX4Q7Z7G2 160 aa14.28□□□□□ -0.12
CCBE1-201ENST00000398179 SPAG5Q96R06 1193 aa14.28□□□□□ -0.12
CCBE1-201ENST00000398179 SESN1Q9Y6P5 492 aa14.28□□□□□ -0.12
CCBE1-201ENST00000398179 LIG3P49916 1009 aa14.28□□□□□ -0.12
CCBE1-201ENST00000398179 NDUFA5Q16718 116 aa14.28□□□□□ -0.12
CCBE1-201ENST00000398179 SYT10Q6XYQ8 523 aa14.28□□□□□ -0.12
CCBE1-201ENST00000398179 HAUS7Q99871 368 aa14.28□□□□□ -0.12
CCBE1-201ENST00000398179 EFHD1Q9BUP0 239 aa14.28□□□□□ -0.12
CCBE1-201ENST00000398179 ABCC8Q09428 1581 aa14.28□□□□□ -0.12
CCBE1-201ENST00000398179 HOXA2O43364 376 aa14.28□□□□□ -0.12
CCBE1-201ENST00000398179 OAS2P29728 719 aaKnown RBP14.28□□□□□ -0.12
CCBE1-201ENST00000398179 GNB5O14775 395 aa14.28□□□□□ -0.12
CCBE1-201ENST00000398179 CASTP20810 708 aaKnown RBP14.28□□□□□ -0.12
CCBE1-201ENST00000398179 CUL1Q13616 776 aa14.28□□□□□ -0.12
CCBE1-201ENST00000398179 NDUFAF2Q8N183 169 aa14.28□□□□□ -0.12
CCBE1-201ENST00000398179 RAD50Q92878 1312 aa14.28□□□□□ -0.12
CCBE1-201ENST00000398179 PPFIA4O75335 1185 aa14.28□□□□□ -0.12
CCBE1-201ENST00000398179 ESRRBO95718 433 aa14.28□□□□□ -0.12
CCBE1-201ENST00000398179 TADA2BQ86TJ2 420 aa14.28□□□□□ -0.12
CCBE1-201ENST00000398179 PLVAPQ9BX97 442 aa14.28□□□□□ -0.12
CCBE1-201ENST00000398179 PDRG1Q9NUG6 133 aa14.28□□□□□ -0.12
CCBE1-201ENST00000398179 C9orf78Q9NZ63 289 aaPredicted RBP14.28□□□□□ -0.12
CCBE1-201ENST00000398179 PUF60Q9UHX1 559 aaKnown RBP14.28□□□□□ -0.12
CCBE1-201ENST00000398179 STK24Q9Y6E0 443 aa14.28□□□□□ -0.12
CCBE1-201ENST00000398179 PDS5BQ9NTI5 1447 aa14.28□□□□□ -0.12
CCBE1-201ENST00000398179 GOLGA8IPA6NC78 632 aa14.27□□□□□ -0.12
CCBE1-201ENST00000398179 HNRNPH2P55795 449 aaKnown RBP14.27□□□□□ -0.12
CCBE1-201ENST00000398179 AP2B1P63010 937 aa14.27□□□□□ -0.12
CCBE1-201ENST00000398179 KIFAP3Q92845 792 aa14.27□□□□□ -0.12
CCBE1-201ENST00000398179 TRPC3Q13507 836 aa14.27□□□□□ -0.12
CCBE1-201ENST00000398179 TOMM20Q15388 145 aa14.27□□□□□ -0.12
CCBE1-201ENST00000398179 GNPTABQ3T906 1256 aa14.27□□□□□ -0.12
CCBE1-201ENST00000398179 NUTM2DQ5VT03 806 aaPredicted RBP14.27□□□□□ -0.12
CCBE1-201ENST00000398179 ACTR5Q9H9F9 607 aaPredicted RBP14.27□□□□□ -0.12
CCBE1-201ENST00000398179 EIF4G1Q04637 1599 aaKnown RBP14.27□□□□□ -0.13
CCBE1-201ENST00000398179 LMNAP02545 664 aaKnown RBP14.27□□□□□ -0.13
CCBE1-201ENST00000398179 OATP04181 439 aa14.27□□□□□ -0.13
CCBE1-201ENST00000398179 ACTN2P35609 894 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms