RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 TMEM39BQ9GZU3 492 aa20.52■□□□□ 0.88
APTR-201ENST00000398043 MECOMQ03112 1051 aa20.51■□□□□ 0.87
APTR-201ENST00000398043 SUPT20HL1Q3ZLR7 823 aa20.51■□□□□ 0.87
APTR-201ENST00000398043 CCDC158Q5M9N0 1113 aa20.51■□□□□ 0.87
APTR-201ENST00000398043 SPTY2D1Q68D10 685 aaPredicted RBP20.51■□□□□ 0.87
APTR-201ENST00000398043 RFX7Q2KHR2 1363 aa20.5■□□□□ 0.87
APTR-201ENST00000398043 RPAP1Q9BWH6 1393 aaPredicted RBP20.5■□□□□ 0.87
APTR-201ENST00000398043 USP2O75604 605 aaPredicted RBP20.5■□□□□ 0.87
APTR-201ENST00000398043 TTC39AQ5SRH9 613 aa20.5■□□□□ 0.87
APTR-201ENST00000398043 ERICH6Q7L0X2 663 aa20.5■□□□□ 0.87
APTR-201ENST00000398043 ARMC9Q7Z3E5 817 aa20.5■□□□□ 0.87
APTR-201ENST00000398043 NSUN4Q96CB9 384 aaKnown RBP20.5■□□□□ 0.87
APTR-201ENST00000398043 KIF1BPQ96EK5 621 aa20.5■□□□□ 0.87
APTR-201ENST00000398043 IL1RAPL2Q9NP60 686 aa20.5■□□□□ 0.87
APTR-201ENST00000398043 ANGEL1Q9UNK9 670 aaKnown RBP20.5■□□□□ 0.87
APTR-201ENST00000398043 RAB11FIP3O75154 756 aa20.49■□□□□ 0.87
APTR-201ENST00000398043 CYP2E1P05181 493 aaPredicted RBP20.49■□□□□ 0.87
APTR-201ENST00000398043 TNNI2P48788 182 aa20.49■□□□□ 0.87
APTR-201ENST00000398043 PRKG1Q13976 671 aa20.49■□□□□ 0.87
APTR-201ENST00000398043 TTLL12Q14166 644 aaPredicted RBP20.49■□□□□ 0.87
APTR-201ENST00000398043 AACSQ86V21 672 aa20.49■□□□□ 0.87
APTR-201ENST00000398043 DZIP1Q86YF9 867 aaKnown RBP20.49■□□□□ 0.87
APTR-201ENST00000398043 SNRKQ9NRH2 765 aa20.49■□□□□ 0.87
APTR-201ENST00000398043 CASP8AP2Q9UKL3 1982 aa20.48■□□□□ 0.87
APTR-201ENST00000398043 KIF23Q02241 960 aaPredicted RBP20.48■□□□□ 0.87
APTR-201ENST00000398043 NFIAQ12857 509 aa20.48■□□□□ 0.87
APTR-201ENST00000398043 TMOD2Q9NZR1 351 aa20.48■□□□□ 0.87
APTR-201ENST00000398043 FAM198AQ9UFP1 575 aa20.48■□□□□ 0.87
APTR-201ENST00000398043 MYH7P12883 1935 aa20.48■□□□□ 0.87
APTR-201ENST00000398043 MROH7-TTC4A0A0A0MT08 1334 aa20.48■□□□□ 0.87
APTR-201ENST00000398043 GPR75-ASB3A0A0A6YYF3 556 aa20.47■□□□□ 0.87
APTR-201ENST00000398043 UNCXA6NJT0 531 aa20.47■□□□□ 0.87
APTR-201ENST00000398043 PPP1R12BO60237 982 aaPredicted RBP20.47■□□□□ 0.87
APTR-201ENST00000398043 ZAP70P43403 619 aa20.47■□□□□ 0.87
APTR-201ENST00000398043 USP40Q9NVE5 1235 aa20.47■□□□□ 0.87
APTR-201ENST00000398043 PCDHB15Q9Y5E8 787 aa20.47■□□□□ 0.87
APTR-201ENST00000398043 RHBDL3P58872 404 aa20.46■□□□□ 0.87
APTR-201ENST00000398043 SLF2Q8IX21 1173 aa20.46■□□□□ 0.87
APTR-201ENST00000398043 CLASRPQ8N2M8 674 aaKnown RBP20.46■□□□□ 0.87
APTR-201ENST00000398043 FAM151AQ8WW52 585 aa20.46■□□□□ 0.87
APTR-201ENST00000398043 CLMNQ96JQ2 1002 aa20.46■□□□□ 0.87
APTR-201ENST00000398043 CSRNP1Q96S65 589 aa20.46■□□□□ 0.87
APTR-201ENST00000398043 IDI2Q9BXS1 227 aa20.46■□□□□ 0.87
APTR-201ENST00000398043 APBB1O00213 710 aa20.45■□□□□ 0.86
APTR-201ENST00000398043 HSPA8P11142 646 aaKnown RBP20.45■□□□□ 0.86
APTR-201ENST00000398043 BTDP43251 543 aa20.45■□□□□ 0.86
APTR-201ENST00000398043 AIDAQ96BJ3 306 aa20.45■□□□□ 0.86
APTR-201ENST00000398043 DCTPP1Q9H773 170 aa20.45■□□□□ 0.86
APTR-201ENST00000398043 PIH1D3Q9NQM4 214 aaKnown RBP20.45■□□□□ 0.86
APTR-201ENST00000398043 IGSF3O75054 1194 aa20.44■□□□□ 0.86
APTR-201ENST00000398043 WDHD1O75717 1129 aaPredicted RBP20.44■□□□□ 0.86
APTR-201ENST00000398043 IREB2P48200 963 aaKnown RBP20.44■□□□□ 0.86
APTR-201ENST00000398043 CTCFP49711 727 aaPredicted RBP20.44■□□□□ 0.86
APTR-201ENST00000398043 COL13A1Q5TAT6 717 aaPredicted RBP20.44■□□□□ 0.86
APTR-201ENST00000398043 ZFPM1Q8IX07 1006 aa20.44■□□□□ 0.86
APTR-201ENST00000398043 CRBNQ96SW2 442 aa20.44■□□□□ 0.86
APTR-201ENST00000398043 RAI14Q9P0K7 980 aa20.44■□□□□ 0.86
APTR-201ENST00000398043 LRP2BPQ9P2M1 347 aa20.44■□□□□ 0.86
APTR-201ENST00000398043 SIPA1L1O43166 1804 aa20.43■□□□□ 0.86
APTR-201ENST00000398043 LDHCP07864 332 aa20.43■□□□□ 0.86
APTR-201ENST00000398043 GSTO1P78417 241 aa20.43■□□□□ 0.86
APTR-201ENST00000398043 SPRYD7Q5W111 196 aa20.43■□□□□ 0.86
APTR-201ENST00000398043 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.43■□□□□ 0.86
APTR-201ENST00000398043 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.43■□□□□ 0.86
APTR-201ENST00000398043 DDX4Q9NQI0 724 aaKnown RBP20.43■□□□□ 0.86
APTR-201ENST00000398043 NDUFB9Q9Y6M9 179 aa20.43■□□□□ 0.86
APTR-201ENST00000398043 ENTPD3O75355 529 aa20.42■□□□□ 0.86
APTR-201ENST00000398043 TCP10Q12799 353 aa20.42■□□□□ 0.86
APTR-201ENST00000398043 ADGRA1Q86SQ6 560 aa20.42■□□□□ 0.86
APTR-201ENST00000398043 ANKRD13AQ8IZ07 590 aa20.42■□□□□ 0.86
APTR-201ENST00000398043 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.42■□□□□ 0.86
APTR-201ENST00000398043 ANTXR1Q9H6X2 564 aa20.42■□□□□ 0.86
APTR-201ENST00000398043 PRDM10Q9NQV6 1147 aa20.42■□□□□ 0.86
APTR-201ENST00000398043 MYH1P12882 1939 aa20.42■□□□□ 0.86
APTR-201ENST00000398043 ATRNL1Q5VV63 1379 aa20.42■□□□□ 0.86
APTR-201ENST00000398043 CA12O43570 354 aa20.41■□□□□ 0.86
APTR-201ENST00000398043 NPM3O75607 178 aaKnown RBP20.41■□□□□ 0.86
APTR-201ENST00000398043 RGS3P49796 1198 aa20.41■□□□□ 0.86
APTR-201ENST00000398043 LBX1P52954 281 aa20.41■□□□□ 0.86
APTR-201ENST00000398043 SH3BP5LQ7L8J4 393 aa20.41■□□□□ 0.86
APTR-201ENST00000398043 REM2Q8IYK8 340 aaPredicted RBP20.41■□□□□ 0.86
APTR-201ENST00000398043 SLC10A4Q96EP9 437 aa20.41■□□□□ 0.86
APTR-201ENST00000398043 LRRCC1Q9C099 1032 aa20.41■□□□□ 0.86
APTR-201ENST00000398043 MAP4K4O95819 1239 aaPredicted RBP20.4■□□□□ 0.86
APTR-201ENST00000398043 GJA5P36382 358 aa20.4■□□□□ 0.86
APTR-201ENST00000398043 TM4SF4P48230 202 aa20.4■□□□□ 0.86
APTR-201ENST00000398043 PHIPQ8WWQ0 1821 aa20.4■□□□□ 0.86
APTR-201ENST00000398043 WNK4Q96J92 1243 aa20.4■□□□□ 0.86
APTR-201ENST00000398043 BEGAINQ9BUH8 593 aa20.4■□□□□ 0.86
APTR-201ENST00000398043 ATAD5Q96QE3 1844 aa20.39■□□□□ 0.86
APTR-201ENST00000398043 COL2A1P02458 1487 aaPredicted RBP20.39■□□□□ 0.85
APTR-201ENST00000398043 SMARCA5O60264 1052 aaPredicted RBP20.39■□□□□ 0.85
APTR-201ENST00000398043 IFIT2P09913 472 aaKnown RBP20.39■□□□□ 0.85
APTR-201ENST00000398043 ZBTB48P10074 688 aaPredicted RBP20.39■□□□□ 0.85
APTR-201ENST00000398043 PPP4CP60510 307 aa20.39■□□□□ 0.85
APTR-201ENST00000398043 MAP3K9P80192 1104 aa20.39■□□□□ 0.85
APTR-201ENST00000398043 NAA16Q6N069 864 aaPredicted RBP20.39■□□□□ 0.85
APTR-201ENST00000398043 HOOK2Q96ED9 719 aa20.39■□□□□ 0.85
APTR-201ENST00000398043 RNF186Q9NXI6 227 aa20.39■□□□□ 0.85
APTR-201ENST00000398043 SAGE1Q9NXZ1 904 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms