RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 BCAMP50895 628 aa21.34■■□□□ 1.01
CHRFAM7A-202ENST00000397827 NDUFA8P51970 172 aa21.34■■□□□ 1.01
CHRFAM7A-202ENST00000397827 APOA5Q6Q788 366 aa21.34■■□□□ 1.01
CHRFAM7A-202ENST00000397827 FMR1NBQ8N0W7 255 aaPredicted RBP21.34■■□□□ 1.01
CHRFAM7A-202ENST00000397827 SPTLC3Q9NUV7 552 aa21.34■■□□□ 1.01
CHRFAM7A-202ENST00000397827 LOC102724428A0A0B4J2F2 783 aa21.34■■□□□ 1.01
CHRFAM7A-202ENST00000397827 SIK1P57059 783 aa21.34■■□□□ 1.01
CHRFAM7A-202ENST00000397827 STX1AQ16623 288 aa21.34■■□□□ 1.01
CHRFAM7A-202ENST00000397827 IFNL3Q8IZI9 196 aa21.34■■□□□ 1.01
CHRFAM7A-202ENST00000397827 ZMYM6O95789 1325 aa21.34■■□□□ 1.01
CHRFAM7A-202ENST00000397827 PLCH1Q4KWH8 1693 aa21.33■■□□□ 1.01
CHRFAM7A-202ENST00000397827 CAMTA2O94983 1202 aa21.33■■□□□ 1.01
CHRFAM7A-202ENST00000397827 TPM3P06753 285 aa21.33■■□□□ 1.01
CHRFAM7A-202ENST00000397827 KIF23Q02241 960 aaPredicted RBP21.33■■□□□ 1.01
CHRFAM7A-202ENST00000397827 MAP3K12Q12852 859 aa21.33■■□□□ 1.01
CHRFAM7A-202ENST00000397827 NIP7Q9Y221 180 aaKnown RBP eCLIP21.33■■□□□ 1.01
CHRFAM7A-202ENST00000397827 ROBO1Q9Y6N7 1651 aa21.33■■□□□ 1.01
CHRFAM7A-202ENST00000397827 GOLGA6L19H0YKK7 550 aa21.33■■□□□ 1
CHRFAM7A-202ENST00000397827 LRMPQ12912 555 aa21.33■■□□□ 1
CHRFAM7A-202ENST00000397827 NAPBQ9H115 298 aa21.33■■□□□ 1
CHRFAM7A-202ENST00000397827 PATL2C9JE40 543 aaKnown RBP21.32■■□□□ 1
CHRFAM7A-202ENST00000397827 PRKAB2O43741 272 aa21.32■■□□□ 1
CHRFAM7A-202ENST00000397827 LRP5O75197 1615 aa21.32■■□□□ 1
CHRFAM7A-202ENST00000397827 SYNE3Q6ZMZ3 975 aa21.32■■□□□ 1
CHRFAM7A-202ENST00000397827 NFXL1Q6ZNB6 911 aa21.32■■□□□ 1
CHRFAM7A-202ENST00000397827 STK11IPQ8N1F8 1099 aa21.32■■□□□ 1
CHRFAM7A-202ENST00000397827 MARCH10Q8NA82 808 aaPredicted RBP21.32■■□□□ 1
CHRFAM7A-202ENST00000397827 IGDCC4Q8TDY8 1250 aa21.32■■□□□ 1
CHRFAM7A-202ENST00000397827 AK7Q96M32 723 aa21.32■■□□□ 1
CHRFAM7A-202ENST00000397827 SDF4Q9BRK5 362 aa21.32■■□□□ 1
CHRFAM7A-202ENST00000397827 ALG1Q9BT22 464 aa21.32■■□□□ 1
CHRFAM7A-202ENST00000397827 POLR3EQ9NVU0 708 aa21.32■■□□□ 1
CHRFAM7A-202ENST00000397827 TACC3Q9Y6A5 838 aa21.32■■□□□ 1
CHRFAM7A-202ENST00000397827 C4AP0C0L4 1744 aa21.32■■□□□ 1
CHRFAM7A-202ENST00000397827 C4BP0C0L5 1744 aa21.32■■□□□ 1
CHRFAM7A-202ENST00000397827 SPTLC2O15270 562 aa21.32■■□□□ 1
CHRFAM7A-202ENST00000397827 BRAPQ7Z569 592 aa21.32■■□□□ 1
CHRFAM7A-202ENST00000397827 SPATA31A1Q5TZJ5 1347 aa21.31■■□□□ 1
CHRFAM7A-202ENST00000397827 UBE2Q2LH0YL09 131 aa21.31■■□□□ 1
CHRFAM7A-202ENST00000397827 CAVIN2O95810 425 aa21.31■■□□□ 1
CHRFAM7A-202ENST00000397827 ZSWIM5Q9P217 1185 aa21.31■■□□□ 1
CHRFAM7A-202ENST00000397827 IQSEC3Q9UPP2 1182 aaPredicted RBP21.31■■□□□ 1
CHRFAM7A-202ENST00000397827 TMEM67Q5HYA8 995 aa21.31■■□□□ 1
CHRFAM7A-202ENST00000397827 KCNG4Q8TDN1 519 aa21.31■■□□□ 1
CHRFAM7A-202ENST00000397827 CCDC152Q4G0S7 254 aa21.31■■□□□ 1
CHRFAM7A-202ENST00000397827 LY9Q9HBG7 655 aa21.31■■□□□ 1
CHRFAM7A-202ENST00000397827 ZBTB43O43298 467 aa21.3■■□□□ 1
CHRFAM7A-202ENST00000397827 YEATS4O95619 227 aa21.3■■□□□ 1
CHRFAM7A-202ENST00000397827 IGHMBP2P38935 993 aaKnown RBP21.3■■□□□ 1
CHRFAM7A-202ENST00000397827 CLIP2Q9UDT6 1046 aa21.3■■□□□ 1
CHRFAM7A-202ENST00000397827 MYH14Q7Z406 1995 aaKnown RBP21.3■■□□□ 1
CHRFAM7A-202ENST00000397827 A0A1W2PQ27 194 aa21.3■■□□□ 1
CHRFAM7A-202ENST00000397827 A0A1W2PQ64 194 aa21.3■■□□□ 1
CHRFAM7A-202ENST00000397827 A0A1W2PQD8 194 aa21.3■■□□□ 1
CHRFAM7A-202ENST00000397827 GSG1L2A8MUP6 293 aa21.3■■□□□ 1
CHRFAM7A-202ENST00000397827 NTSR2O95665 410 aa21.3■■□□□ 1
CHRFAM7A-202ENST00000397827 ANO1Q5XXA6 986 aa21.3■■□□□ 1
CHRFAM7A-202ENST00000397827 LCORLQ8N3X6 602 aa21.3■■□□□ 1
CHRFAM7A-202ENST00000397827 MIGA1Q8NAN2 632 aa21.3■■□□□ 1
CHRFAM7A-202ENST00000397827 TMEM87BQ96K49 555 aa21.3■■□□□ 1
CHRFAM7A-202ENST00000397827 BECN2A8MW95 431 aa21.29■■□□□ 1
CHRFAM7A-202ENST00000397827 MARCKSP29966 332 aaPredicted RBP21.29■■□□□ 1
CHRFAM7A-202ENST00000397827 RRP12Q5JTH9 1297 aaKnown RBP21.29■■□□□ 1
CHRFAM7A-202ENST00000397827 KRT40Q6A162 431 aa21.29■■□□□ 1
CHRFAM7A-202ENST00000397827 ANO10Q9NW15 660 aa21.29■■□□□ 1
CHRFAM7A-202ENST00000397827 ALX1Q15699 326 aa21.29■■□□□ 1
CHRFAM7A-202ENST00000397827 VPS37DQ86XT2 251 aa21.29■■□□□ 1
CHRFAM7A-202ENST00000397827 DHX40Q8IX18 779 aaKnown RBP21.29■■□□□ 1
CHRFAM7A-202ENST00000397827 TSC1Q92574 1164 aa21.29■■□□□ 1
CHRFAM7A-202ENST00000397827 TOMM22Q9NS69 142 aa21.29■■□□□ 1
CHRFAM7A-202ENST00000397827 WNK3Q9BYP7 1800 aa21.29■■□□□ 1
CHRFAM7A-202ENST00000397827 GOLGA8AA7E2F4 631 aa21.28■■□□□ 1
CHRFAM7A-202ENST00000397827 IFIT3O14879 490 aaKnown RBP21.28■■□□□ 1
CHRFAM7A-202ENST00000397827 RANBP6O60518 1105 aaKnown RBP21.28■■□□□ 1
CHRFAM7A-202ENST00000397827 CHRNDQ07001 517 aa21.28■■□□□ 1
CHRFAM7A-202ENST00000397827 CCDC144BQ3MJ40 725 aa21.28■■□□□ 1
CHRFAM7A-202ENST00000397827 PARP10Q53GL7 1025 aa21.28■■□□□ 1
CHRFAM7A-202ENST00000397827 ZKSCAN3Q9BRR0 538 aa21.28■■□□□ 1
CHRFAM7A-202ENST00000397827 FAM217BQ9NTX9 383 aaPredicted RBP21.28■■□□□ 1
CHRFAM7A-202ENST00000397827 WTIPA6NIX2 430 aaPredicted RBP21.28■■□□□ 1
CHRFAM7A-202ENST00000397827 KCNQ2O43526 872 aa21.28■■□□□ 1
CHRFAM7A-202ENST00000397827 NTRK3Q16288 839 aa21.28■■□□□ 1
CHRFAM7A-202ENST00000397827 PLCD3Q8N3E9 789 aa21.28■■□□□ 1
CHRFAM7A-202ENST00000397827 ARAP2Q8WZ64 1704 aa21.28■■□□□ 1
CHRFAM7A-202ENST00000397827 CDKL5O76039 1030 aa21.27■■□□□ 1
CHRFAM7A-202ENST00000397827 AEBP2Q6ZN18 517 aaPredicted RBP21.27■■□□□ 1
CHRFAM7A-202ENST00000397827 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.27■■□□□ 1
CHRFAM7A-202ENST00000397827 CDCA7Q9BWT1 371 aaPredicted RBP21.27■■□□□ 1
CHRFAM7A-202ENST00000397827 SLC4A4Q9Y6R1 1079 aa21.27■■□□□ 1
CHRFAM7A-202ENST00000397827 NUTM2BA6NNL0 878 aaPredicted RBP21.27■■□□□ 1
CHRFAM7A-202ENST00000397827 NUTM2EB1AL46 878 aaPredicted RBP21.27■■□□□ 1
CHRFAM7A-202ENST00000397827 WDHD1O75717 1129 aaPredicted RBP21.27■■□□□ 1
CHRFAM7A-202ENST00000397827 IARSP41252 1262 aaKnown RBP21.27■■□□□ 1
CHRFAM7A-202ENST00000397827 TDO2P48775 406 aa21.27■■□□□ 1
CHRFAM7A-202ENST00000397827 CPLX2Q6PUV4 134 aaKnown RBP21.27■■□□□ 1
CHRFAM7A-202ENST00000397827 NUTM2AQ8IVF1 878 aaPredicted RBP21.27■■□□□ 1
CHRFAM7A-202ENST00000397827 LRP2BPQ9P2M1 347 aa21.27■■□□□ 1
CHRFAM7A-202ENST00000397827 GNL2Q13823 731 aaKnown RBP21.26■□□□□ 0.99
CHRFAM7A-202ENST00000397827 AXDND1Q5T1B0 1012 aaPredicted RBP21.26■□□□□ 0.99
CHRFAM7A-202ENST00000397827 AKNAD1Q5T1N1 836 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms