RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 PRKAB2O43741 272 aa23.21■■□□□ 1.31
PDLIM2-205ENST00000397761 DYNLL1P63167 89 aaKnown RBP23.21■■□□□ 1.31
PDLIM2-205ENST00000397761 DIXDC1Q155Q3 683 aa23.21■■□□□ 1.31
PDLIM2-205ENST00000397761 GIMAP6Q6P9H5 292 aa23.21■■□□□ 1.31
PDLIM2-205ENST00000397761 USP17L1Q7RTZ2 530 aa23.21■■□□□ 1.31
PDLIM2-205ENST00000397761 JAKMIP1Q96N16 626 aaKnown RBP23.21■■□□□ 1.31
PDLIM2-205ENST00000397761 TTC14Q96N46 770 aa23.21■■□□□ 1.31
PDLIM2-205ENST00000397761 TAOK3Q9H2K8 898 aa23.21■■□□□ 1.31
PDLIM2-205ENST00000397761 ZNF277Q9NRM2 450 aaPredicted RBP23.21■■□□□ 1.31
PDLIM2-205ENST00000397761 MYH1P12882 1939 aa23.2■■□□□ 1.31
PDLIM2-205ENST00000397761 GPR75-ASB3A0A0A6YYF3 556 aa23.2■■□□□ 1.3
PDLIM2-205ENST00000397761 NFKBIEO00221 500 aa23.2■■□□□ 1.3
PDLIM2-205ENST00000397761 PSMA5P28066 241 aa23.2■■□□□ 1.3
PDLIM2-205ENST00000397761 IARSP41252 1262 aaKnown RBP23.2■■□□□ 1.3
PDLIM2-205ENST00000397761 IMMTQ16891 758 aaKnown RBP23.2■■□□□ 1.3
PDLIM2-205ENST00000397761 HSCBQ8IWL3 235 aa23.2■■□□□ 1.3
PDLIM2-205ENST00000397761 BCS1LQ9Y276 419 aa23.2■■□□□ 1.3
PDLIM2-205ENST00000397761 CASTP20810 708 aaKnown RBP23.19■■□□□ 1.3
PDLIM2-205ENST00000397761 STOX1Q6ZVD7 989 aa23.19■■□□□ 1.3
PDLIM2-205ENST00000397761 LARGE2Q8N3Y3 721 aa23.19■■□□□ 1.3
PDLIM2-205ENST00000397761 MRIQ9BWK5 157 aa23.19■■□□□ 1.3
PDLIM2-205ENST00000397761 UPF3BQ9BZI7 483 aaKnown RBP23.19■■□□□ 1.3
PDLIM2-205ENST00000397761 NACAP1Q9BZK3 213 aa23.19■■□□□ 1.3
PDLIM2-205ENST00000397761 AATFQ9NY61 560 aaKnown RBP eCLIP23.19■■□□□ 1.3
PDLIM2-205ENST00000397761 APPP05067 770 aa23.18■■□□□ 1.3
PDLIM2-205ENST00000397761 RUFY3Q7L099 469 aa23.18■■□□□ 1.3
PDLIM2-205ENST00000397761 BAG3O95817 575 aa23.17■■□□□ 1.3
PDLIM2-205ENST00000397761 MCM2P49736 904 aa23.17■■□□□ 1.3
PDLIM2-205ENST00000397761 FBXW7Q969H0 707 aa23.17■■□□□ 1.3
PDLIM2-205ENST00000397761 MXD3Q9BW11 206 aa23.17■■□□□ 1.3
PDLIM2-205ENST00000397761 CRNKL1Q9BZJ0 848 aaKnown RBP23.17■■□□□ 1.3
PDLIM2-205ENST00000397761 NBPF3Q9H094 633 aa23.17■■□□□ 1.3
PDLIM2-205ENST00000397761 NAPBQ9H115 298 aa23.17■■□□□ 1.3
PDLIM2-205ENST00000397761 ALDH8A1Q9H2A2 487 aaPredicted RBP23.17■■□□□ 1.3
PDLIM2-205ENST00000397761 CYP46A1Q9Y6A2 500 aa23.17■■□□□ 1.3
PDLIM2-205ENST00000397761 GOLGB1Q14789 3259 aaKnown RBP23.17■■□□□ 1.3
PDLIM2-205ENST00000397761 UTRNP46939 3433 aa23.17■■□□□ 1.3
PDLIM2-205ENST00000397761 DCAF8L1A6NGE4 600 aa23.17■■□□□ 1.3
PDLIM2-205ENST00000397761 E7EWF7 191 aa23.17■■□□□ 1.3
PDLIM2-205ENST00000397761 ZNF213O14771 459 aa23.17■■□□□ 1.3
PDLIM2-205ENST00000397761 HDLBPQ00341 1268 aaKnown RBP23.17■■□□□ 1.3
PDLIM2-205ENST00000397761 HHIPL2Q6UWX4 724 aa23.17■■□□□ 1.3
PDLIM2-205ENST00000397761 ATP8A2Q9NTI2 1148 aa23.17■■□□□ 1.3
PDLIM2-205ENST00000397761 ZNRF3Q9ULT6 936 aa23.17■■□□□ 1.3
PDLIM2-205ENST00000397761 TTF2Q9UNY4 1162 aaKnown RBP23.17■■□□□ 1.3
PDLIM2-205ENST00000397761 DAGLAQ9Y4D2 1042 aa23.17■■□□□ 1.3
PDLIM2-205ENST00000397761 K7ELQ4 463 aaPredicted RBP23.16■■□□□ 1.3
PDLIM2-205ENST00000397761 SDR42E1Q8WUS8 393 aa23.16■■□□□ 1.3
PDLIM2-205ENST00000397761 NEK1Q96PY6 1258 aa23.16■■□□□ 1.3
PDLIM2-205ENST00000397761 MKRN1Q9UHC7 482 aaKnown RBP23.16■■□□□ 1.3
PDLIM2-205ENST00000397761 HMGB1P09429 215 aaKnown RBP23.15■■□□□ 1.3
PDLIM2-205ENST00000397761 PLCG2P16885 1265 aa23.15■■□□□ 1.3
PDLIM2-205ENST00000397761 RPS6KB1P23443 525 aa23.15■■□□□ 1.3
PDLIM2-205ENST00000397761 COL9A3Q14050 684 aaPredicted RBP23.15■■□□□ 1.3
PDLIM2-205ENST00000397761 BLOC1S2Q6QNY1 142 aa23.15■■□□□ 1.3
PDLIM2-205ENST00000397761 NOL10Q9BSC4 688 aaKnown RBP23.15■■□□□ 1.3
PDLIM2-205ENST00000397761 MYO3BQ8WXR4 1341 aa23.14■■□□□ 1.29
PDLIM2-205ENST00000397761 VIL1P09327 827 aaKnown RBP23.14■■□□□ 1.29
PDLIM2-205ENST00000397761 BTDP43251 543 aa23.14■■□□□ 1.29
PDLIM2-205ENST00000397761 SLC4A3P48751 1232 aa23.14■■□□□ 1.29
PDLIM2-205ENST00000397761 TDO2P48775 406 aa23.14■■□□□ 1.29
PDLIM2-205ENST00000397761 HAND2P61296 217 aa23.14■■□□□ 1.29
PDLIM2-205ENST00000397761 NIM1KQ8IY84 436 aa23.14■■□□□ 1.29
PDLIM2-205ENST00000397761 DCP1AQ9NPI6 582 aaPredicted RBP23.14■■□□□ 1.29
PDLIM2-205ENST00000397761 DAXXQ9UER7 740 aaPredicted RBP23.14■■□□□ 1.29
PDLIM2-205ENST00000397761 ANAPC4Q9UJX5 808 aa23.14■■□□□ 1.29
PDLIM2-205ENST00000397761 CPA1P15085 419 aa23.13■■□□□ 1.29
PDLIM2-205ENST00000397761 RHBDL3P58872 404 aa23.13■■□□□ 1.29
PDLIM2-205ENST00000397761 SH3RF3Q8TEJ3 882 aaPredicted RBP23.13■■□□□ 1.29
PDLIM2-205ENST00000397761 TBC1D10CQ8IV04 446 aa23.12■■□□□ 1.29
PDLIM2-205ENST00000397761 GMLQ99445 158 aa23.12■■□□□ 1.29
PDLIM2-205ENST00000397761 PDRG1Q9NUG6 133 aa23.12■■□□□ 1.29
PDLIM2-205ENST00000397761 AK2P54819 239 aa23.11■■□□□ 1.29
PDLIM2-205ENST00000397761 EXOSC10Q01780 885 aaKnown RBP23.11■■□□□ 1.29
PDLIM2-205ENST00000397761 SBK1Q52WX2 424 aa23.11■■□□□ 1.29
PDLIM2-205ENST00000397761 TEKT1Q969V4 418 aa23.11■■□□□ 1.29
PDLIM2-205ENST00000397761 ZDHHC15Q96MV8 337 aa23.11■■□□□ 1.29
PDLIM2-205ENST00000397761 F8W031 263 aaPredicted RBP23.11■■□□□ 1.29
PDLIM2-205ENST00000397761 RSBN1LQ6PCB5 846 aaPredicted RBP23.11■■□□□ 1.29
PDLIM2-205ENST00000397761 DHX32Q7L7V1 743 aaKnown RBP23.11■■□□□ 1.29
PDLIM2-205ENST00000397761 SERPINA10Q9UK55 444 aa23.11■■□□□ 1.29
PDLIM2-205ENST00000397761 WDR19Q8NEZ3 1342 aa23.1■■□□□ 1.29
PDLIM2-205ENST00000397761 PSMD14O00487 310 aa23.1■■□□□ 1.29
PDLIM2-205ENST00000397761 PRELPP51888 382 aa23.1■■□□□ 1.29
PDLIM2-205ENST00000397761 PPARAQ07869 468 aa23.1■■□□□ 1.29
PDLIM2-205ENST00000397761 CTR9Q6PD62 1173 aa23.1■■□□□ 1.29
PDLIM2-205ENST00000397761 KIAA0825Q8IV33 1275 aa23.1■■□□□ 1.29
PDLIM2-205ENST00000397761 MB21D2Q8IYB1 491 aaPredicted RBP23.1■■□□□ 1.29
PDLIM2-205ENST00000397761 FBXL16Q8N461 479 aa23.1■■□□□ 1.29
PDLIM2-205ENST00000397761 STAG1Q8WVM7 1258 aa23.1■■□□□ 1.29
PDLIM2-205ENST00000397761 JDP2Q8WYK2 163 aa23.1■■□□□ 1.29
PDLIM2-205ENST00000397761 CRKP46108 304 aa23.09■■□□□ 1.29
PDLIM2-205ENST00000397761 SCNN1DP51172 638 aa23.09■■□□□ 1.29
PDLIM2-205ENST00000397761 AKNAD1Q5T1N1 836 aa23.09■■□□□ 1.29
PDLIM2-205ENST00000397761 APOBEC3HQ6NTF7 200 aaKnown RBP23.09■■□□□ 1.29
PDLIM2-205ENST00000397761 NCOA7Q8NI08 942 aa23.09■■□□□ 1.29
PDLIM2-205ENST00000397761 AGXT2Q9BYV1 514 aa23.09■■□□□ 1.29
PDLIM2-205ENST00000397761 ARPP21Q9UBL0 812 aaPredicted RBP23.09■■□□□ 1.29
PDLIM2-205ENST00000397761 MYH8P13535 1937 aa23.08■■□□□ 1.29
PDLIM2-205ENST00000397761 RAD17O75943 681 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms