RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 ZKSCAN3Q9BRR0 538 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 CARD10Q9BWT7 1032 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 GREM2Q9H772 168 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 TMOD3Q9NYL9 352 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 PCDHA7Q9UN72 937 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 CRYBG1Q9Y4K1 1723 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 ZNF213O14771 459 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 GPAA1O43292 621 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 ATP8B1O43520 1251 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 KIF1CO43896 1103 aaKnown RBP5.79□□□□□ -1.48
SSR1-202ENST00000397511 IVLP07476 585 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 MAGEA9P43362 315 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 SNW1Q13573 536 aaKnown RBP5.79□□□□□ -1.48
SSR1-202ENST00000397511 ZRSR1Q15695 479 aaKnown RBP5.79□□□□□ -1.48
SSR1-202ENST00000397511 IMMTQ16891 758 aaKnown RBP5.79□□□□□ -1.48
SSR1-202ENST00000397511 TSGA10IPQ3SY00 556 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 NYAP1Q6ZVC0 841 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 C8orf76Q96K31 380 aa5.79□□□□□ -1.48
SSR1-202ENST00000397511 ZSCAN16Q9H4T2 348 aaPredicted RBP5.79□□□□□ -1.48
SSR1-202ENST00000397511 ORC3Q9UBD5 711 aaPredicted RBP5.79□□□□□ -1.48
SSR1-202ENST00000397511 CARMIL3Q8ND23 1372 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 PLEKHG2Q9H7P9 1386 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 FOXP2O15409 715 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 ITGA6P23229 1130 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 MCAMP43121 646 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 EXOSC10Q01780 885 aaKnown RBP5.78□□□□□ -1.48
SSR1-202ENST00000397511 HELLSQ9NRZ9 838 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 DONSONQ9NYP3 566 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 SLIT3O75094 1523 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 B4E1Z4 1266 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 KIF28PB7ZC32 967 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 SMC2O95347 1197 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 IL2RBP14784 551 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 ST5P78524 1137 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 ERCC6LQ2NKX8 1250 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 DPCR1Q3MIW9 517 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 ARHGAP29Q52LW3 1261 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 LEKR1Q6ZMV7 388 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 EP400NLQ6ZTU2 488 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 CADPS2Q86UW7 1296 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 PLA2G4DQ86XP0 818 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 FAM177A1Q8N128 213 aaPredicted RBP5.78□□□□□ -1.48
SSR1-202ENST00000397511 SMARCC2Q8TAQ2 1214 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 PPM1EQ8WY54 764 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 TRMT112Q9UI30 125 aaKnown RBP5.78□□□□□ -1.48
SSR1-202ENST00000397511 SH3TC1Q8TE82 1336 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 PCDH11XQ9BZA7 1347 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 PCDH11YQ9BZA8 1340 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 PALLDQ8WX93 1383 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 OAS2P29728 719 aaKnown RBP5.78□□□□□ -1.48
SSR1-202ENST00000397511 CDC25BP30305 580 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 SATB1Q01826 763 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 KIF6Q6ZMV9 814 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 SYNE3Q6ZMZ3 975 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 NFXL1Q6ZNB6 911 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 BRINP3Q76B58 766 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 IQUBQ8NA54 791 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 PIGBQ92521 554 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 DSCC1Q9BVC3 393 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.78□□□□□ -1.485e-11■■■□□ 15
SSR1-202ENST00000397511 PSD3Q9NYI0 1048 aa5.78□□□□□ -1.48
SSR1-202ENST00000397511 SPATA31A3Q5VYP0 1347 aa5.77□□□□□ -1.48
SSR1-202ENST00000397511 SCN11AQ9UI33 1791 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 EP400Q96L91 3159 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 ZRANB2O95218 330 aaKnown RBP eCLIP5.77□□□□□ -1.49
SSR1-202ENST00000397511 TPM1P09493 284 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 LMOD1P29536 600 aaPredicted RBP5.77□□□□□ -1.49
SSR1-202ENST00000397511 PHKA1P46020 1223 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 CTDSPL2Q05D32 466 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 GOLGA8FQ08AF8 430 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 GOLGA8DPQ0D2H9 430 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 SLC4A8Q2Y0W8 1093 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 LRRC8AQ8IWT6 810 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 EXOC4Q96A65 974 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 CLIC6Q96NY7 704 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 CXorf56Q9H5V9 222 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 SIPA1L3O60292 1781 aaPredicted RBP5.77□□□□□ -1.49
SSR1-202ENST00000397511 hCG_1642624A0A1W2PR95 340 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 WTIPA6NIX2 430 aaPredicted RBP5.77□□□□□ -1.49
SSR1-202ENST00000397511 SMIM22K7EJ46 135 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 SKILP12757 684 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 ACTN2P35609 894 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 LMAN1P49257 510 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 ANTXR2P58335 489 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 TRDNQ13061 729 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 TCIRG1Q13488 830 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 SART3Q15020 963 aaKnown RBP5.77□□□□□ -1.49
SSR1-202ENST00000397511 IQCB1Q15051 598 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 SMIM5Q71RC9 77 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 PACS2Q86VP3 889 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 KCTD17Q8N5Z5 321 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 MIGA1Q8NAN2 632 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 UBXN4Q92575 508 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 ZNF396Q96N95 335 aaPredicted RBP5.77□□□□□ -1.49
SSR1-202ENST00000397511 RCOR1Q9UKL0 485 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 WWC3Q9ULE0 1092 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 MTMR7Q9Y216 660 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 ARFGEF2Q9Y6D5 1785 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 WDR17Q8IZU2 1322 aa5.77□□□□□ -1.49
SSR1-202ENST00000397511 MST1RQ04912 1400 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms