RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 RASA3Q14644 834 aa25.79■■□□□ 1.72
TSPAN4-206ENST00000397408 TTF1Q15361 905 aaPredicted RBP25.79■■□□□ 1.72
TSPAN4-206ENST00000397408 B4GALNT3Q6L9W6 998 aa25.79■■□□□ 1.72
TSPAN4-206ENST00000397408 HAUS7Q99871 368 aa25.79■■□□□ 1.72
TSPAN4-206ENST00000397408 EDC3Q96F86 508 aaKnown RBP25.78■■□□□ 1.72
TSPAN4-206ENST00000397408 USP40Q9NVE5 1235 aa25.78■■□□□ 1.72
TSPAN4-206ENST00000397408 IGSF3O75054 1194 aa25.77■■□□□ 1.72
TSPAN4-206ENST00000397408 TNNI2P48788 182 aa25.77■■□□□ 1.72
TSPAN4-206ENST00000397408 GBA2Q9HCG7 927 aaPredicted RBP25.77■■□□□ 1.72
TSPAN4-206ENST00000397408 PAG1Q9NWQ8 432 aa25.77■■□□□ 1.72
TSPAN4-206ENST00000397408 GPR75-ASB3A0A0A6YYF3 556 aa25.76■■□□□ 1.71
TSPAN4-206ENST00000397408 NF2P35240 595 aa25.76■■□□□ 1.71
TSPAN4-206ENST00000397408 MAP3K12Q12852 859 aa25.76■■□□□ 1.71
TSPAN4-206ENST00000397408 LNPKQ9C0E8 428 aa25.76■■□□□ 1.71
TSPAN4-206ENST00000397408 CNTNAP1P78357 1384 aa25.75■■□□□ 1.71
TSPAN4-206ENST00000397408 TTC41PQ6P2S7 1318 aa25.75■■□□□ 1.71
TSPAN4-206ENST00000397408 MX1P20591 662 aa25.75■■□□□ 1.71
TSPAN4-206ENST00000397408 FKBP1CQ5VVH2 108 aa25.75■■□□□ 1.71
TSPAN4-206ENST00000397408 TLL2Q9Y6L7 1015 aa25.75■■□□□ 1.71
TSPAN4-206ENST00000397408 SALL3Q9BXA9 1300 aa25.74■■□□□ 1.71
TSPAN4-206ENST00000397408 MAGEB6Q8N7X4 407 aa25.74■■□□□ 1.71
TSPAN4-206ENST00000397408 C2orf69Q8N8R5 385 aa25.74■■□□□ 1.71
TSPAN4-206ENST00000397408 TMEM39BQ9GZU3 492 aa25.74■■□□□ 1.71
TSPAN4-206ENST00000397408 PAPPA2Q9BXP8 1791 aa25.74■■□□□ 1.71
TSPAN4-206ENST00000397408 SSC5DA1L4H1 1573 aa25.73■■□□□ 1.71
TSPAN4-206ENST00000397408 CYP7A1P22680 504 aa25.73■■□□□ 1.71
TSPAN4-206ENST00000397408 NUCB1Q02818 461 aa25.73■■□□□ 1.71
TSPAN4-206ENST00000397408 NFIAQ12857 509 aa25.73■■□□□ 1.71
TSPAN4-206ENST00000397408 ADGRA1Q86SQ6 560 aa25.73■■□□□ 1.71
TSPAN4-206ENST00000397408 SAPCD2Q86UD0 394 aa25.73■■□□□ 1.71
TSPAN4-206ENST00000397408 FAM83AQ86UY5 434 aa25.73■■□□□ 1.71
TSPAN4-206ENST00000397408 NOL10Q9BSC4 688 aaKnown RBP25.73■■□□□ 1.71
TSPAN4-206ENST00000397408 MKRN1Q9UHC7 482 aaKnown RBP25.73■■□□□ 1.71
TSPAN4-206ENST00000397408 RFX7Q2KHR2 1363 aa25.73■■□□□ 1.71
TSPAN4-206ENST00000397408 RHBDL3P58872 404 aa25.72■■□□□ 1.71
TSPAN4-206ENST00000397408 NBPF12Q5TAG4 269 aaPredicted RBP25.72■■□□□ 1.71
TSPAN4-206ENST00000397408 CHD1LQ86WJ1 897 aa25.72■■□□□ 1.71
TSPAN4-206ENST00000397408 CDAN1Q8IWY9 1227 aa25.72■■□□□ 1.71
TSPAN4-206ENST00000397408 ERC2O15083 957 aa25.71■■□□□ 1.71
TSPAN4-206ENST00000397408 PI4K2BQ8TCG2 481 aa25.71■■□□□ 1.71
TSPAN4-206ENST00000397408 TEPSINQ96N21 525 aa25.71■■□□□ 1.71
TSPAN4-206ENST00000397408 AATFQ9NY61 560 aaKnown RBP eCLIP25.71■■□□□ 1.71
TSPAN4-206ENST00000397408 RASSF10A6NK89 507 aa25.71■■□□□ 1.71
TSPAN4-206ENST00000397408 GLRX3O76003 335 aaKnown RBP25.71■■□□□ 1.71
TSPAN4-206ENST00000397408 PDE6AP16499 860 aa25.71■■□□□ 1.71
TSPAN4-206ENST00000397408 HUNKP57058 714 aa25.71■■□□□ 1.71
TSPAN4-206ENST00000397408 TCP10Q12799 353 aa25.71■■□□□ 1.71
TSPAN4-206ENST00000397408 TTLL12Q14166 644 aaPredicted RBP25.71■■□□□ 1.71
TSPAN4-206ENST00000397408 SUPT20HL1Q3ZLR7 823 aa25.71■■□□□ 1.71
TSPAN4-206ENST00000397408 FAM198AQ9UFP1 575 aa25.71■■□□□ 1.71
TSPAN4-206ENST00000397408 WDHD1O75717 1129 aaPredicted RBP25.7■■□□□ 1.7
TSPAN4-206ENST00000397408 BAG3O95817 575 aa25.7■■□□□ 1.7
TSPAN4-206ENST00000397408 NEFLP07196 543 aa25.7■■□□□ 1.7
TSPAN4-206ENST00000397408 RGS3P49796 1198 aa25.7■■□□□ 1.7
TSPAN4-206ENST00000397408 FKBP1BP68106 108 aa25.7■■□□□ 1.7
TSPAN4-206ENST00000397408 PRKG1Q13976 671 aa25.7■■□□□ 1.7
TSPAN4-206ENST00000397408 DEFB115Q30KQ5 88 aa25.7■■□□□ 1.7
TSPAN4-206ENST00000397408 SLC9C2Q5TAH2 1124 aa25.7■■□□□ 1.7
TSPAN4-206ENST00000397408 TMED8Q6PL24 325 aaPredicted RBP25.7■■□□□ 1.7
TSPAN4-206ENST00000397408 MOB2Q70IA6 237 aa25.7■■□□□ 1.7
TSPAN4-206ENST00000397408 DNAJC5GQ8N7S2 189 aa25.7■■□□□ 1.7
TSPAN4-206ENST00000397408 IDI2Q9BXS1 227 aa25.7■■□□□ 1.7
TSPAN4-206ENST00000397408 RPAP1Q9BWH6 1393 aaPredicted RBP25.69■■□□□ 1.7
TSPAN4-206ENST00000397408 PAXIP1Q6ZW49 1069 aaPredicted RBP25.69■■□□□ 1.7
TSPAN4-206ENST00000397408 SH3RF3Q8TEJ3 882 aaPredicted RBP25.69■■□□□ 1.7
TSPAN4-206ENST00000397408 FAM151AQ8WW52 585 aa25.69■■□□□ 1.7
TSPAN4-206ENST00000397408 KLRG1Q96E93 195 aa25.69■■□□□ 1.7
TSPAN4-206ENST00000397408 MAP4K4O95819 1239 aaPredicted RBP25.68■■□□□ 1.7
TSPAN4-206ENST00000397408 PICALMQ13492 652 aa25.68■■□□□ 1.7
TSPAN4-206ENST00000397408 TEX11Q8IYF3 940 aa25.68■■□□□ 1.7
TSPAN4-206ENST00000397408 MIGA1Q8NAN2 632 aa25.68■■□□□ 1.7
TSPAN4-206ENST00000397408 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.68■■□□□ 1.7
TSPAN4-206ENST00000397408 DDX4Q9NQI0 724 aaKnown RBP25.68■■□□□ 1.7
TSPAN4-206ENST00000397408 STAP2Q9UGK3 403 aa25.68■■□□□ 1.7
TSPAN4-206ENST00000397408 FZD1Q9UP38 647 aa25.68■■□□□ 1.7
TSPAN4-206ENST00000397408 PLCG2P16885 1265 aa25.67■■□□□ 1.7
TSPAN4-206ENST00000397408 PDE1AP54750 535 aa25.67■■□□□ 1.7
TSPAN4-206ENST00000397408 PPP4CP60510 307 aa25.67■■□□□ 1.7
TSPAN4-206ENST00000397408 MYH7P12883 1935 aa25.67■■□□□ 1.7
TSPAN4-206ENST00000397408 ZNF532Q9HCE3 1301 aa25.67■■□□□ 1.7
TSPAN4-206ENST00000397408 ENTPD3O75355 529 aa25.66■■□□□ 1.7
TSPAN4-206ENST00000397408 DYNLL1P63167 89 aaKnown RBP25.66■■□□□ 1.7
TSPAN4-206ENST00000397408 ARMC9Q7Z3E5 817 aa25.66■■□□□ 1.7
TSPAN4-206ENST00000397408 HHIPL1Q96JK4 782 aa25.66■■□□□ 1.7
TSPAN4-206ENST00000397408 ANGEL1Q9UNK9 670 aaKnown RBP25.66■■□□□ 1.7
TSPAN4-206ENST00000397408 TCRBV5S4A2TA0A5A2 114 aa25.65■■□□□ 1.7
TSPAN4-206ENST00000397408 UBE2Q2LH0YL09 131 aa25.65■■□□□ 1.7
TSPAN4-206ENST00000397408 PPP1R12BO60237 982 aaPredicted RBP25.65■■□□□ 1.7
TSPAN4-206ENST00000397408 ADD2P35612 726 aa25.65■■□□□ 1.7
TSPAN4-206ENST00000397408 CYP4F22Q6NT55 531 aa25.65■■□□□ 1.7
TSPAN4-206ENST00000397408 ZFPM1Q8IX07 1006 aa25.65■■□□□ 1.7
TSPAN4-206ENST00000397408 GRM1Q13255 1194 aa25.64■■□□□ 1.7
TSPAN4-206ENST00000397408 KBTBD3Q8NAB2 608 aa25.64■■□□□ 1.7
TSPAN4-206ENST00000397408 AK9Q5TCS8 1911 aa25.64■■□□□ 1.7
TSPAN4-206ENST00000397408 VEGFBP49765 207 aa25.63■■□□□ 1.69
TSPAN4-206ENST00000397408 SLFNL1Q499Z3 407 aa25.63■■□□□ 1.69
TSPAN4-206ENST00000397408 CERS3Q8IU89 383 aa25.63■■□□□ 1.69
TSPAN4-206ENST00000397408 CAPNS2Q96L46 248 aa25.63■■□□□ 1.69
TSPAN4-206ENST00000397408 MAGEB6P1A0A0J9YX57 407 aa25.63■■□□□ 1.69
TSPAN4-206ENST00000397408 NPM3O75607 178 aaKnown RBP25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms