RNA–Protein interactions for RNA: ENST00000397345.7

NEB-203, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-203ENST00000397345 SYCE1Q8N0S2 351 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 DTX3LQ8TDB6 740 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 SPZ1Q9BXG8 430 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 STIM2Q9P246 746 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 FAF1Q9UNN5 650 aaPredicted RBP2.84□□□□□ -1.95
NEB-203ENST00000397345 ELL2O00472 640 aaPredicted RBP2.84□□□□□ -1.95
NEB-203ENST00000397345 PPP4R3AQ6IN85 833 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 OSBPL3Q9H4L5 887 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 RIPOR2Q9Y4F9 1068 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 EBAG9O00559 213 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 GFPT2O94808 682 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 TSG101Q99816 390 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 WDR75Q8IWA0 830 aaKnown RBP2.84□□□□□ -1.95
NEB-203ENST00000397345 FAXDC2Q96IV6 333 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 PUF60Q9UHX1 559 aaKnown RBP2.84□□□□□ -1.95
NEB-203ENST00000397345 LIMCH1Q9UPQ0 1083 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 RASIP1Q5U651 963 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 VPS53Q5VIR6 699 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 BBOF1Q8ND07 529 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 TTC1Q99614 292 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 NYXQ9GZU5 481 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 MYBL1P10243 752 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 SPA17Q15506 151 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 TRIM74Q86UV6 250 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 TRIM73Q86UV7 250 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 TRIM11Q96F44 468 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 CCDC43Q96MW1 224 aaKnown RBP2.84□□□□□ -1.95
NEB-203ENST00000397345 UHRF1BP1LA0JNW5 1464 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 NOP9Q86U38 636 aaKnown RBP2.84□□□□□ -1.95
NEB-203ENST00000397345 MSL3Q8N5Y2 521 aaKnown RBP2.84□□□□□ -1.95
NEB-203ENST00000397345 AK8Q96MA6 479 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 SPATS2LQ9NUQ6 558 aaKnown RBP2.84□□□□□ -1.95
NEB-203ENST00000397345 ATP2A2P16615 1042 aaKnown RBP2.84□□□□□ -1.95
NEB-203ENST00000397345 GABPB1Q06547 395 aaPredicted RBP2.84□□□□□ -1.95
NEB-203ENST00000397345 AFAP1L2Q8N4X5 818 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 WHAMMQ8TF30 809 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 ATP2A3Q93084 1043 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 TMEM87BQ96K49 555 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 RRP7AQ9Y3A4 280 aaKnown RBP2.84□□□□□ -1.95
NEB-203ENST00000397345 KDRP35968 1356 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 NPHP3Q7Z494 1330 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 LSM1O15116 133 aaKnown RBP2.84□□□□□ -1.95
NEB-203ENST00000397345 SEC31AO94979 1220 aaKnown RBP2.84□□□□□ -1.95
NEB-203ENST00000397345 CCDC170Q8IYT3 715 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 MS4A14Q96JA4 679 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 CDHR1Q96JP9 859 aa2.84□□□□□ -1.95
NEB-203ENST00000397345 SASH1O94885 1247 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 CCDC144CPQ8IYA2 1237 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 CKAP2LQ8IYA6 745 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 EXOC5O00471 708 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 NLRP5P59047 1200 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 AKNAD1Q5T1N1 836 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 MAPK6Q16659 721 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 KIAA0753Q2KHM9 967 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 SAPCD2Q86UD0 394 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 STRN4Q9NRL3 753 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 TDRD9Q8NDG6 1382 aaKnown RBP2.84□□□□□ -1.96
NEB-203ENST00000397345 PTPN21Q16825 1174 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 KRI1Q8N9T8 703 aaKnown RBP2.84□□□□□ -1.96
NEB-203ENST00000397345 MLKLQ8NB16 471 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 TRIM63Q969Q1 353 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 KRT86O43790 486 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 RXRBP28702 533 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 FAM47EQ6ZV65 393 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 POTEDQ86YR6 584 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 HAUS1Q96CS2 278 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 MAML3Q96JK9 1138 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 EIF4G1Q04637 1599 aaKnown RBP2.84□□□□□ -1.96
NEB-203ENST00000397345 SKILP12757 684 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 SKOR1P84550 965 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 ODR4Q5SWX8 454 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 NBPF10Q6P3W6 841 aaKnown RBP2.84□□□□□ -1.96
NEB-203ENST00000397345 IFT74Q96LB3 600 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 NOP14P78316 857 aaKnown RBP2.84□□□□□ -1.96
NEB-203ENST00000397345 GUCY1B3Q02153 619 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 GLE1Q53GS7 698 aaKnown RBP2.84□□□□□ -1.96
NEB-203ENST00000397345 SPECC1Q5M775 1068 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 PPP4R3CPQ6ZMV5 832 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 MID2Q9UJV3 735 aa2.84□□□□□ -1.96
NEB-203ENST00000397345 BRD1O95696 1058 aa2.83□□□□□ -1.96
NEB-203ENST00000397345 IGHDP01880 384 aa2.83□□□□□ -1.96
NEB-203ENST00000397345 SMARCA1P28370 1054 aa2.83□□□□□ -1.96
NEB-203ENST00000397345 UBE4AQ14139 1066 aa2.83□□□□□ -1.96
NEB-203ENST00000397345 SNIP1Q8TAD8 396 aaKnown RBP2.83□□□□□ -1.96
NEB-203ENST00000397345 LRRC59Q96AG4 307 aaKnown RBP2.83□□□□□ -1.96
NEB-203ENST00000397345 CEP63Q96MT8 703 aa2.83□□□□□ -1.96
NEB-203ENST00000397345 SBNO2Q9Y2G9 1366 aa2.83□□□□□ -1.96
NEB-203ENST00000397345 H7C1D1 291 aa2.83□□□□□ -1.96
NEB-203ENST00000397345 CLCN2P51788 898 aa2.83□□□□□ -1.96
NEB-203ENST00000397345 LSM14AQ8ND56 463 aaKnown RBP2.83□□□□□ -1.96
NEB-203ENST00000397345 CRACR2AQ9BSW2 395 aa2.83□□□□□ -1.96
NEB-203ENST00000397345 MED4Q9NPJ6 270 aa2.83□□□□□ -1.96
NEB-203ENST00000397345 NEK4P51957 841 aa2.83□□□□□ -1.96
NEB-203ENST00000397345 PHC3Q8NDX5 983 aa2.83□□□□□ -1.96
NEB-203ENST00000397345 TBX22Q9Y458 520 aa2.83□□□□□ -1.96
NEB-203ENST00000397345 PPME1Q9Y570 386 aa2.83□□□□□ -1.96
NEB-203ENST00000397345 MAP3K9P80192 1104 aa2.83□□□□□ -1.96
NEB-203ENST00000397345 TMED1Q13445 227 aa2.83□□□□□ -1.96
NEB-203ENST00000397345 C1orf228Q6PIY5 440 aa2.83□□□□□ -1.96
NEB-203ENST00000397345 CATIPQ7Z7H3 387 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms