RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 WASHC4Q2M389 1173 aa11.34□□□□□ -0.59
TRIM39-203ENST00000396547 CREBRFQ8IUR6 639 aa11.34□□□□□ -0.59
TRIM39-203ENST00000396547 CCDC12Q8WUD4 166 aaPredicted RBP11.34□□□□□ -0.59
TRIM39-203ENST00000396547 LLPHQ9BRT6 129 aaKnown RBP11.34□□□□□ -0.59
TRIM39-203ENST00000396547 VPS18Q9P253 973 aa11.34□□□□□ -0.59
TRIM39-203ENST00000396547 PPP2R2CQ9Y2T4 447 aa11.34□□□□□ -0.59
TRIM39-203ENST00000396547 KLF18A0A0U1RQI7 1052 aa11.33□□□□□ -0.6
TRIM39-203ENST00000396547 ZNF609O15014 1411 aa11.33□□□□□ -0.6
TRIM39-203ENST00000396547 SYKP43405 635 aa11.33□□□□□ -0.6
TRIM39-203ENST00000396547 NCAPHQ15003 741 aa11.33□□□□□ -0.6
TRIM39-203ENST00000396547 COL24A1Q17RW2 1714 aa11.33□□□□□ -0.6
TRIM39-203ENST00000396547 TSGA10IPQ3SY00 556 aa11.33□□□□□ -0.6
TRIM39-203ENST00000396547 CC2D1AQ6P1N0 951 aaPredicted RBP11.33□□□□□ -0.6
TRIM39-203ENST00000396547 ALDH8A1Q9H2A2 487 aaPredicted RBP11.33□□□□□ -0.6
TRIM39-203ENST00000396547 PARP3Q9Y6F1 533 aa11.33□□□□□ -0.6
TRIM39-203ENST00000396547 OVOS2A0A0G2JMS6 1433 aa11.33□□□□□ -0.6
TRIM39-203ENST00000396547 GOLGA8BA8MQT2 603 aa11.33□□□□□ -0.6
TRIM39-203ENST00000396547 TULP2O00295 520 aa11.33□□□□□ -0.6
TRIM39-203ENST00000396547 USPL1Q5W0Q7 1092 aa11.33□□□□□ -0.6
TRIM39-203ENST00000396547 REXO1L1PQ8IX06 675 aa11.33□□□□□ -0.6
TRIM39-203ENST00000396547 AXIN2Q9Y2T1 843 aa11.33□□□□□ -0.6
TRIM39-203ENST00000396547 NUP188Q5SRE5 1749 aa11.33□□□□□ -0.6
TRIM39-203ENST00000396547 EFCAB8A8MWE9 144 aa11.32□□□□□ -0.6
TRIM39-203ENST00000396547 ATP5JP18859 108 aa11.32□□□□□ -0.6
TRIM39-203ENST00000396547 OLFM4Q6UX06 510 aa11.32□□□□□ -0.6
TRIM39-203ENST00000396547 TOGARAM2Q6ZUX3 1019 aa11.32□□□□□ -0.6
TRIM39-203ENST00000396547 TRMT44Q8IYL2 757 aaKnown RBP11.32□□□□□ -0.6
TRIM39-203ENST00000396547 RTEL1Q9NZ71 1219 aa11.32□□□□□ -0.6
TRIM39-203ENST00000396547 CARMIL3Q8ND23 1372 aa11.32□□□□□ -0.6
TRIM39-203ENST00000396547 ZSCAN12O43309 604 aa11.32□□□□□ -0.6
TRIM39-203ENST00000396547 WDHD1O75717 1129 aaPredicted RBP11.32□□□□□ -0.6
TRIM39-203ENST00000396547 ZNF827Q17R98 1081 aa11.32□□□□□ -0.6
TRIM39-203ENST00000396547 PLEKHO1Q53GL0 409 aaPredicted RBP11.32□□□□□ -0.6
TRIM39-203ENST00000396547 DHX58Q96C10 678 aa11.32□□□□□ -0.6
TRIM39-203ENST00000396547 PLEKHA4Q9H4M7 779 aa11.32□□□□□ -0.6
TRIM39-203ENST00000396547 ADAM21Q9UKJ8 722 aa11.32□□□□□ -0.6
TRIM39-203ENST00000396547 LY75O60449 1722 aa11.32□□□□□ -0.6
TRIM39-203ENST00000396547 KIF28PB7ZC32 967 aa11.32□□□□□ -0.6
TRIM39-203ENST00000396547 CCP110O43303 1012 aa11.32□□□□□ -0.6
TRIM39-203ENST00000396547 TFRCP02786 760 aaKnown RBP11.32□□□□□ -0.6
TRIM39-203ENST00000396547 MYSM1Q5VVJ2 828 aa11.32□□□□□ -0.6
TRIM39-203ENST00000396547 KCNG4Q8TDN1 519 aa11.32□□□□□ -0.6
TRIM39-203ENST00000396547 UPF1Q92900 1129 aaKnown RBP eCLIP11.32□□□□□ -0.6
TRIM39-203ENST00000396547 AK7Q96M32 723 aa11.32□□□□□ -0.6
TRIM39-203ENST00000396547 CCDC85AQ96PX6 553 aaPredicted RBP11.32□□□□□ -0.6
TRIM39-203ENST00000396547 BAG1Q99933 345 aaPredicted RBP11.32□□□□□ -0.6
TRIM39-203ENST00000396547 RASSF4Q9H2L5 321 aa11.32□□□□□ -0.6
TRIM39-203ENST00000396547 SUGCTQ9HAC7 445 aa11.32□□□□□ -0.6
TRIM39-203ENST00000396547 RNF216Q9NWF9 866 aaPredicted RBP11.32□□□□□ -0.6
TRIM39-203ENST00000396547 BABAM1Q9NWV8 329 aa11.32□□□□□ -0.6
TRIM39-203ENST00000396547 VWA3AA6NCI4 1184 aa11.31□□□□□ -0.6
TRIM39-203ENST00000396547 FOXN1O15353 648 aa11.31□□□□□ -0.6
TRIM39-203ENST00000396547 HMGB1P09429 215 aaKnown RBP11.31□□□□□ -0.6
TRIM39-203ENST00000396547 RHOXF2BP0C7M4 288 aa11.31□□□□□ -0.6
TRIM39-203ENST00000396547 MTF1Q14872 753 aa11.31□□□□□ -0.6
TRIM39-203ENST00000396547 ANO1Q5XXA6 986 aa11.31□□□□□ -0.6
TRIM39-203ENST00000396547 RHOXF2Q9BQY4 288 aa11.31□□□□□ -0.6
TRIM39-203ENST00000396547 PXDNLA1KZ92 1463 aa11.31□□□□□ -0.6
TRIM39-203ENST00000396547 MYO1CO00159 1063 aa11.31□□□□□ -0.6
TRIM39-203ENST00000396547 RNMTO43148 476 aaKnown RBP11.31□□□□□ -0.6
TRIM39-203ENST00000396547 HSPD1P10809 573 aaKnown RBP11.31□□□□□ -0.6
TRIM39-203ENST00000396547 MYL5Q02045 173 aa11.31□□□□□ -0.6
TRIM39-203ENST00000396547 CCDC158Q5M9N0 1113 aa11.31□□□□□ -0.6
TRIM39-203ENST00000396547 SEPT12Q8IYM1 358 aa11.31□□□□□ -0.6
TRIM39-203ENST00000396547 PDE11AQ9HCR9 933 aa11.31□□□□□ -0.6
TRIM39-203ENST00000396547 PAPPAQ13219 1627 aa11.31□□□□□ -0.6
TRIM39-203ENST00000396547 PHLPP2Q6ZVD8 1323 aa11.31□□□□□ -0.6
TRIM39-203ENST00000396547 A0A087WZG4 1122 aa11.3□□□□□ -0.6
TRIM39-203ENST00000396547 ZC3H6P61129 1189 aaKnown RBP11.3□□□□□ -0.6
TRIM39-203ENST00000396547 GCKRQ14397 625 aa11.3□□□□□ -0.6
TRIM39-203ENST00000396547 LMBR1LQ6UX01 489 aa11.3□□□□□ -0.6
TRIM39-203ENST00000396547 A0A0U1RQJ8 604 aa11.3□□□□□ -0.6
TRIM39-203ENST00000396547 NEURL1BA8MQ27 555 aa11.3□□□□□ -0.6
TRIM39-203ENST00000396547 H3BQF6 201 aa11.3□□□□□ -0.6
TRIM39-203ENST00000396547 CBFA2T2O43439 604 aa11.3□□□□□ -0.6
TRIM39-203ENST00000396547 N4BP1O75113 896 aaKnown RBP11.3□□□□□ -0.6
TRIM39-203ENST00000396547 PTPN12Q05209 780 aaKnown RBP11.3□□□□□ -0.6
TRIM39-203ENST00000396547 LONRF2Q1L5Z9 754 aa11.3□□□□□ -0.6
TRIM39-203ENST00000396547 NFATC2IPQ8NCF5 419 aa11.3□□□□□ -0.6
TRIM39-203ENST00000396547 CNNM3Q8NE01 707 aa11.3□□□□□ -0.6
TRIM39-203ENST00000396547 ATRIPQ8WXE1 791 aa11.3□□□□□ -0.6
TRIM39-203ENST00000396547 CCDC102AQ96A19 550 aa11.3□□□□□ -0.6
TRIM39-203ENST00000396547 PAG1Q9NWQ8 432 aa11.3□□□□□ -0.6
TRIM39-203ENST00000396547 CCDC82Q8N4S0 544 aa11.3□□□□□ -0.6
TRIM39-203ENST00000396547 KBTBD3Q8NAB2 608 aa11.3□□□□□ -0.6
TRIM39-203ENST00000396547 ZNF594Q96JF6 807 aaPredicted RBP11.3□□□□□ -0.6
TRIM39-203ENST00000396547 CACNA1FO60840 1977 aa11.3□□□□□ -0.6
TRIM39-203ENST00000396547 PRC1O43663 620 aa11.29□□□□□ -0.6
TRIM39-203ENST00000396547 TPM1P09493 284 aa11.29□□□□□ -0.6
TRIM39-203ENST00000396547 EXOSC10Q01780 885 aaKnown RBP11.29□□□□□ -0.6
TRIM39-203ENST00000396547 AKAP4Q5JQC9 854 aa11.29□□□□□ -0.6
TRIM39-203ENST00000396547 KLHL10Q6JEL2 608 aa11.29□□□□□ -0.6
TRIM39-203ENST00000396547 LEKR1Q6ZMV7 388 aa11.29□□□□□ -0.6
TRIM39-203ENST00000396547 PHKBQ93100 1093 aa11.29□□□□□ -0.6
TRIM39-203ENST00000396547 SRRTQ9BXP5 876 aaKnown RBP11.29□□□□□ -0.6
TRIM39-203ENST00000396547 TOMM22Q9NS69 142 aa11.29□□□□□ -0.6
TRIM39-203ENST00000396547 MROH7-TTC4A0A0A0MT08 1334 aa11.29□□□□□ -0.6
TRIM39-203ENST00000396547 A0A1W2PQ27 194 aa11.29□□□□□ -0.6
TRIM39-203ENST00000396547 A0A1W2PQ64 194 aa11.29□□□□□ -0.6
TRIM39-203ENST00000396547 A0A1W2PQD8 194 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms