RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 PRKAB2O43741 272 aa17.52■□□□□ 0.4
CBX3-202ENST00000396386 NFIXQ14938 502 aa17.52■□□□□ 0.4
CBX3-202ENST00000396386 FBXO33Q7Z6M2 555 aa17.52■□□□□ 0.4
CBX3-202ENST00000396386 CNBD1Q8NA66 436 aa17.52■□□□□ 0.4
CBX3-202ENST00000396386 KRT23Q9C075 422 aa17.52■□□□□ 0.4
CBX3-202ENST00000396386 LRRC4BQ9NT99 713 aa17.52■□□□□ 0.4
CBX3-202ENST00000396386 MAGEB6P1A0A0J9YX57 407 aa17.52■□□□□ 0.39
CBX3-202ENST00000396386 CTDSPL2Q05D32 466 aa17.52■□□□□ 0.39
CBX3-202ENST00000396386 AKNAD1Q5T1N1 836 aa17.52■□□□□ 0.39
CBX3-202ENST00000396386 FAM43AQ8N2R8 423 aa17.52■□□□□ 0.39
CBX3-202ENST00000396386 PPP1R9BQ96SB3 815 aa17.52■□□□□ 0.39
CBX3-202ENST00000396386 CFAP45Q9UL16 551 aa17.52■□□□□ 0.39
CBX3-202ENST00000396386 ADGRA1Q86SQ6 560 aa17.51■□□□□ 0.39
CBX3-202ENST00000396386 STAG1Q8WVM7 1258 aa17.51■□□□□ 0.39
CBX3-202ENST00000396386 QTRT2Q9H974 415 aaKnown RBP17.51■□□□□ 0.39
CBX3-202ENST00000396386 TFIP11Q9UBB9 837 aaKnown RBP17.51■□□□□ 0.39
CBX3-202ENST00000396386 DUOX1Q9NRD9 1551 aa17.51■□□□□ 0.39
CBX3-202ENST00000396386 GOLGA6L4A6NEF3 574 aa17.5■□□□□ 0.39
CBX3-202ENST00000396386 FDPSP14324 419 aaKnown RBP17.5■□□□□ 0.39
CBX3-202ENST00000396386 KLRK1P26718 216 aa17.5■□□□□ 0.39
CBX3-202ENST00000396386 TM4SF1P30408 202 aa17.5■□□□□ 0.39
CBX3-202ENST00000396386 METAP2P50579 478 aaKnown RBP eCLIP17.5■□□□□ 0.39
CBX3-202ENST00000396386 SLC27A3Q5K4L6 730 aa17.5■□□□□ 0.39
CBX3-202ENST00000396386 MFSD6Q6ZSS7 791 aa17.5■□□□□ 0.39
CBX3-202ENST00000396386 BAZ2AQ9UIF9 1905 aaKnown RBP17.5■□□□□ 0.39
CBX3-202ENST00000396386 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.5■□□□□ 0.39
CBX3-202ENST00000396386 HIBADHP31937 336 aaKnown RBP17.5■□□□□ 0.39
CBX3-202ENST00000396386 TMEM67Q5HYA8 995 aa17.5■□□□□ 0.39
CBX3-202ENST00000396386 ATL3Q6DD88 541 aa17.5■□□□□ 0.39
CBX3-202ENST00000396386 APOA5Q6Q788 366 aa17.5■□□□□ 0.39
CBX3-202ENST00000396386 RAB11FIP4Q86YS3 637 aa17.5■□□□□ 0.39
CBX3-202ENST00000396386 NKX2-3Q8TAU0 364 aa17.5■□□□□ 0.39
CBX3-202ENST00000396386 ZNF396Q96N95 335 aaPredicted RBP17.5■□□□□ 0.39
CBX3-202ENST00000396386 RNF41Q9H4P4 317 aaPredicted RBP17.5■□□□□ 0.39
CBX3-202ENST00000396386 LY9Q9HBG7 655 aa17.5■□□□□ 0.39
CBX3-202ENST00000396386 ORC3Q9UBD5 711 aaPredicted RBP17.5■□□□□ 0.39
CBX3-202ENST00000396386 KDM4AO75164 1064 aa17.49■□□□□ 0.39
CBX3-202ENST00000396386 CDKL5O76039 1030 aa17.49■□□□□ 0.39
CBX3-202ENST00000396386 GRAPQ13588 217 aa17.49■□□□□ 0.39
CBX3-202ENST00000396386 NFXL1Q6ZNB6 911 aa17.49■□□□□ 0.39
CBX3-202ENST00000396386 SGMS1Q86VZ5 419 aa17.49■□□□□ 0.39
CBX3-202ENST00000396386 GRAPLQ8TC17 118 aaPredicted RBP17.49■□□□□ 0.39
CBX3-202ENST00000396386 TRIM44Q96DX7 344 aaPredicted RBP17.49■□□□□ 0.39
CBX3-202ENST00000396386 C8orf76Q96K31 380 aa17.49■□□□□ 0.39
CBX3-202ENST00000396386 RTN4Q9NQC3 1192 aaKnown RBP17.49■□□□□ 0.39
CBX3-202ENST00000396386 DLEC1Q9Y238 1755 aa17.49■□□□□ 0.39
CBX3-202ENST00000396386 NID2Q14112 1375 aa17.49■□□□□ 0.39
CBX3-202ENST00000396386 ZBTB22O15209 634 aa17.48■□□□□ 0.39
CBX3-202ENST00000396386 PPFIA3O75145 1194 aa17.48■□□□□ 0.39
CBX3-202ENST00000396386 CPLX2Q6PUV4 134 aaKnown RBP17.48■□□□□ 0.39
CBX3-202ENST00000396386 IGDCC4Q8TDY8 1250 aa17.48■□□□□ 0.39
CBX3-202ENST00000396386 RIOK1Q9BRS2 568 aaKnown RBP17.48■□□□□ 0.39
CBX3-202ENST00000396386 ZBTB43O43298 467 aa17.48■□□□□ 0.39
CBX3-202ENST00000396386 LIFRP42702 1097 aa17.48■□□□□ 0.39
CBX3-202ENST00000396386 GUCY1B3Q02153 619 aa17.48■□□□□ 0.39
CBX3-202ENST00000396386 PPARAQ07869 468 aa17.48■□□□□ 0.39
CBX3-202ENST00000396386 RGS22Q8NE09 1264 aa17.48■□□□□ 0.39
CBX3-202ENST00000396386 TFCP2L1Q9NZI6 479 aa17.48■□□□□ 0.39
CBX3-202ENST00000396386 TACC3Q9Y6A5 838 aa17.48■□□□□ 0.39
CBX3-202ENST00000396386 IRS2Q9Y4H2 1338 aa17.47■□□□□ 0.39
CBX3-202ENST00000396386 IFIT3O14879 490 aaKnown RBP17.47■□□□□ 0.39
CBX3-202ENST00000396386 SART3Q15020 963 aaKnown RBP17.47■□□□□ 0.39
CBX3-202ENST00000396386 PRR5LQ6MZQ0 368 aa17.47■□□□□ 0.39
CBX3-202ENST00000396386 KRT27Q7Z3Y8 459 aa17.47■□□□□ 0.39
CBX3-202ENST00000396386 MICU3Q86XE3 530 aa17.47■□□□□ 0.39
CBX3-202ENST00000396386 RNF214Q8ND24 703 aa17.47■□□□□ 0.39
CBX3-202ENST00000396386 SDR42E1Q8WUS8 393 aa17.47■□□□□ 0.39
CBX3-202ENST00000396386 MTA3Q9BTC8 594 aa17.47■□□□□ 0.39
CBX3-202ENST00000396386 TOMM22Q9NS69 142 aa17.47■□□□□ 0.39
CBX3-202ENST00000396386 ZSWIM5Q9P217 1185 aa17.47■□□□□ 0.39
CBX3-202ENST00000396386 CCDC69A6NI79 296 aa17.46■□□□□ 0.39
CBX3-202ENST00000396386 GOLGA8AA7E2F4 631 aa17.46■□□□□ 0.39
CBX3-202ENST00000396386 LIG1P18858 919 aa17.46■□□□□ 0.39
CBX3-202ENST00000396386 ADD1P35611 737 aaKnown RBP17.46■□□□□ 0.39
CBX3-202ENST00000396386 RBM6P78332 1123 aaKnown RBP17.46■□□□□ 0.39
CBX3-202ENST00000396386 ST5P78524 1137 aa17.46■□□□□ 0.39
CBX3-202ENST00000396386 RRP12Q5JTH9 1297 aaKnown RBP17.46■□□□□ 0.39
CBX3-202ENST00000396386 TMED8Q6PL24 325 aaPredicted RBP17.46■□□□□ 0.39
CBX3-202ENST00000396386 BICD2Q8TD16 824 aa17.46■□□□□ 0.39
CBX3-202ENST00000396386 BRIP1Q9BX63 1249 aa17.46■□□□□ 0.39
CBX3-202ENST00000396386 NUP62CLQ9H1M0 184 aa17.46■□□□□ 0.39
CBX3-202ENST00000396386 INCENPQ9NQS7 918 aa17.46■□□□□ 0.39
CBX3-202ENST00000396386 DDX19AQ9NUU7 478 aaKnown RBP17.46■□□□□ 0.39
CBX3-202ENST00000396386 ANAPC4Q9UJX5 808 aa17.46■□□□□ 0.39
CBX3-202ENST00000396386 LRRC37AA6NMS7 1700 aa17.46■□□□□ 0.39
CBX3-202ENST00000396386 GYS1P13807 737 aa17.46■□□□□ 0.38
CBX3-202ENST00000396386 NSUN4Q96CB9 384 aaKnown RBP17.46■□□□□ 0.38
CBX3-202ENST00000396386 SENP2Q9HC62 589 aa17.46■□□□□ 0.38
CBX3-202ENST00000396386 XDHP47989 1333 aa17.45■□□□□ 0.38
CBX3-202ENST00000396386 DYNLL1P63167 89 aaKnown RBP17.45■□□□□ 0.38
CBX3-202ENST00000396386 CHAF1AQ13111 956 aaPredicted RBP17.45■□□□□ 0.38
CBX3-202ENST00000396386 GIMAP6Q6P9H5 292 aa17.45■□□□□ 0.38
CBX3-202ENST00000396386 FBXO18Q8NFZ0 1043 aa17.45■□□□□ 0.38
CBX3-202ENST00000396386 ZNF384Q8TF68 577 aa17.45■□□□□ 0.38
CBX3-202ENST00000396386 RPGRQ92834 1020 aaKnown RBP17.45■□□□□ 0.38
CBX3-202ENST00000396386 PGBD1Q96JS3 809 aa17.45■□□□□ 0.38
CBX3-202ENST00000396386 LEMD3Q9Y2U8 911 aa17.45■□□□□ 0.38
CBX3-202ENST00000396386 SLC12A7Q9Y666 1083 aa17.45■□□□□ 0.38
CBX3-202ENST00000396386 ERICH2A1L162 156 aa17.44■□□□□ 0.38
CBX3-202ENST00000396386 RXRAP19793 462 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms