RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 ZSCAN16Q9H4T2 348 aaPredicted RBP14.24□□□□□ -0.13
ITGB1-202ENST00000396033 INCENPQ9NQS7 918 aa14.24□□□□□ -0.13
ITGB1-202ENST00000396033 ANKIB1Q9P2G1 1089 aa14.24□□□□□ -0.13
ITGB1-202ENST00000396033 CHD4Q14839 1912 aa14.24□□□□□ -0.13
ITGB1-202ENST00000396033 MYH13Q9UKX3 1938 aa14.24□□□□□ -0.13
ITGB1-202ENST00000396033 CACNA1SQ13698 1873 aa14.24□□□□□ -0.13
ITGB1-202ENST00000396033 ST5P78524 1137 aa14.24□□□□□ -0.13
ITGB1-202ENST00000396033 CHAF1AQ13111 956 aaPredicted RBP14.24□□□□□ -0.13
ITGB1-202ENST00000396033 AKNAD1Q5T1N1 836 aa14.24□□□□□ -0.13
ITGB1-202ENST00000396033 TTC6Q86TZ1 520 aa14.24□□□□□ -0.13
ITGB1-202ENST00000396033 CNNM2Q9H8M5 875 aa14.24□□□□□ -0.13
ITGB1-202ENST00000396033 CPLX1O14810 134 aa14.23□□□□□ -0.13
ITGB1-202ENST00000396033 CCDC183Q5T5S1 534 aa14.23□□□□□ -0.13
ITGB1-202ENST00000396033 MFSD6Q6ZSS7 791 aa14.23□□□□□ -0.13
ITGB1-202ENST00000396033 RPGRQ92834 1020 aaKnown RBP14.23□□□□□ -0.13
ITGB1-202ENST00000396033 TMEM87BQ96K49 555 aa14.23□□□□□ -0.13
ITGB1-202ENST00000396033 SCAND2PQ9GZW5 306 aaPredicted RBP14.23□□□□□ -0.13
ITGB1-202ENST00000396033 RRP9O43818 475 aaKnown RBP14.23□□□□□ -0.13
ITGB1-202ENST00000396033 SDR42E1Q8WUS8 393 aa14.23□□□□□ -0.13
ITGB1-202ENST00000396033 PDS5AQ29RF7 1337 aaKnown RBP14.23□□□□□ -0.13
ITGB1-202ENST00000396033 SPATA32Q96LK8 384 aa14.23□□□□□ -0.13
ITGB1-202ENST00000396033 KRT23Q9C075 422 aa14.23□□□□□ -0.13
ITGB1-202ENST00000396033 TOMM22Q9NS69 142 aa14.23□□□□□ -0.13
ITGB1-202ENST00000396033 TFIP11Q9UBB9 837 aaKnown RBP14.23□□□□□ -0.13
ITGB1-202ENST00000396033 ELP1O95163 1332 aa14.23□□□□□ -0.13
ITGB1-202ENST00000396033 KDM4AO75164 1064 aa14.22□□□□□ -0.13
ITGB1-202ENST00000396033 SERPINB2P05120 415 aa14.22□□□□□ -0.13
ITGB1-202ENST00000396033 TMEM67Q5HYA8 995 aa14.22□□□□□ -0.13
ITGB1-202ENST00000396033 RRP12Q5JTH9 1297 aaKnown RBP14.22□□□□□ -0.13
ITGB1-202ENST00000396033 NFXL1Q6ZNB6 911 aa14.22□□□□□ -0.13
ITGB1-202ENST00000396033 SLC51AQ86UW1 340 aa14.22□□□□□ -0.13
ITGB1-202ENST00000396033 STAG1Q8WVM7 1258 aa14.22□□□□□ -0.13
ITGB1-202ENST00000396033 RIOK1Q9BRS2 568 aaKnown RBP14.22□□□□□ -0.13
ITGB1-202ENST00000396033 RBSNQ9H1K0 784 aa14.22□□□□□ -0.13
ITGB1-202ENST00000396033 FDPSP14324 419 aaKnown RBP14.22□□□□□ -0.13
ITGB1-202ENST00000396033 METAP2P50579 478 aaKnown RBP eCLIP14.22□□□□□ -0.136e-7■□□□□ 11
ITGB1-202ENST00000396033 GUCY1B3Q02153 619 aa14.22□□□□□ -0.13
ITGB1-202ENST00000396033 TXNRD3Q86VQ6 643 aa14.22□□□□□ -0.13
ITGB1-202ENST00000396033 STK11IPQ8N1F8 1099 aa14.22□□□□□ -0.13
ITGB1-202ENST00000396033 DYNLL1P63167 89 aaKnown RBP14.21□□□□□ -0.13
ITGB1-202ENST00000396033 TXNRD1Q16881 649 aa14.21□□□□□ -0.13
ITGB1-202ENST00000396033 TACC3Q9Y6A5 838 aa14.21□□□□□ -0.13
ITGB1-202ENST00000396033 PPARAQ07869 468 aa14.21□□□□□ -0.13
ITGB1-202ENST00000396033 ZNF384Q8TF68 577 aa14.21□□□□□ -0.13
ITGB1-202ENST00000396033 LEO1Q8WVC0 666 aaPredicted RBP14.21□□□□□ -0.13
ITGB1-202ENST00000396033 XDHP47989 1333 aa14.21□□□□□ -0.14
ITGB1-202ENST00000396033 IFIT3O14879 490 aaKnown RBP14.21□□□□□ -0.14
ITGB1-202ENST00000396033 APOA5Q6Q788 366 aa14.21□□□□□ -0.14
ITGB1-202ENST00000396033 IGDCC4Q8TDY8 1250 aa14.21□□□□□ -0.14
ITGB1-202ENST00000396033 NSUN4Q96CB9 384 aaKnown RBP14.21□□□□□ -0.14
ITGB1-202ENST00000396033 RNF41Q9H4P4 317 aaPredicted RBP14.21□□□□□ -0.14
ITGB1-202ENST00000396033 LY9Q9HBG7 655 aa14.21□□□□□ -0.14
ITGB1-202ENST00000396033 SENP2Q9HC62 589 aa14.21□□□□□ -0.14
ITGB1-202ENST00000396033 ZSWIM5Q9P217 1185 aa14.21□□□□□ -0.14
ITGB1-202ENST00000396033 ORC3Q9UBD5 711 aaPredicted RBP14.21□□□□□ -0.14
ITGB1-202ENST00000396033 JAG2Q9Y219 1238 aa14.21□□□□□ -0.14
ITGB1-202ENST00000396033 IRS2Q9Y4H2 1338 aa14.2□□□□□ -0.14
ITGB1-202ENST00000396033 MINDY4BA8MYZ0 360 aa14.2□□□□□ -0.14
ITGB1-202ENST00000396033 RXRAP19793 462 aa14.2□□□□□ -0.14
ITGB1-202ENST00000396033 MECOMQ03112 1051 aa14.2□□□□□ -0.14
ITGB1-202ENST00000396033 MICU3Q86XE3 530 aa14.2□□□□□ -0.14
ITGB1-202ENST00000396033 TSPY26PQ9H489 355 aa14.2□□□□□ -0.14
ITGB1-202ENST00000396033 LEMD3Q9Y2U8 911 aa14.2□□□□□ -0.14
ITGB1-202ENST00000396033 ANP32BQ92688 251 aaKnown RBP14.2□□□□□ -0.14
ITGB1-202ENST00000396033 PRDM4Q9UKN5 801 aa14.2□□□□□ -0.14
ITGB1-202ENST00000396033 GOLGA6L4A6NEF3 574 aa14.2□□□□□ -0.14
ITGB1-202ENST00000396033 PRDX5P30044 214 aa14.2□□□□□ -0.14
ITGB1-202ENST00000396033 ZBTB43O43298 467 aa14.19□□□□□ -0.14
ITGB1-202ENST00000396033 SGMS1Q86VZ5 419 aa14.19□□□□□ -0.14
ITGB1-202ENST00000396033 C8orf76Q96K31 380 aa14.19□□□□□ -0.14
ITGB1-202ENST00000396033 CFAP45Q9UL16 551 aa14.19□□□□□ -0.14
ITGB1-202ENST00000396033 RBM6P78332 1123 aaKnown RBP14.19□□□□□ -0.14
ITGB1-202ENST00000396033 DDR1Q08345 913 aa14.19□□□□□ -0.14
ITGB1-202ENST00000396033 SART3Q15020 963 aaKnown RBP14.19□□□□□ -0.14
ITGB1-202ENST00000396033 CRY2Q49AN0 593 aa14.19□□□□□ -0.14
ITGB1-202ENST00000396033 PROM2Q8N271 834 aa14.19□□□□□ -0.14
ITGB1-202ENST00000396033 RBM17Q96I25 401 aaKnown RBP14.19□□□□□ -0.14
ITGB1-202ENST00000396033 MAST2Q6P0Q8 1798 aa14.19□□□□□ -0.14
ITGB1-202ENST00000396033 CCDC69A6NI79 296 aa14.19□□□□□ -0.14
ITGB1-202ENST00000396033 GOLGA8AA7E2F4 631 aa14.19□□□□□ -0.14
ITGB1-202ENST00000396033 CDKL5O76039 1030 aa14.19□□□□□ -0.14
ITGB1-202ENST00000396033 LETM1O95202 739 aaPredicted RBP14.19□□□□□ -0.14
ITGB1-202ENST00000396033 LIFRP42702 1097 aa14.19□□□□□ -0.14
ITGB1-202ENST00000396033 CCDC144CPQ8IYA2 1237 aa14.19□□□□□ -0.14
ITGB1-202ENST00000396033 CPLX2Q6PUV4 134 aaKnown RBP14.18□□□□□ -0.14
ITGB1-202ENST00000396033 BRIP1Q9BX63 1249 aa14.18□□□□□ -0.14
ITGB1-202ENST00000396033 SLC12A7Q9Y666 1083 aa14.18□□□□□ -0.14
ITGB1-202ENST00000396033 ADD1P35611 737 aaKnown RBP14.18□□□□□ -0.14
ITGB1-202ENST00000396033 ZNF772Q68DY9 489 aaPredicted RBP14.18□□□□□ -0.14
ITGB1-202ENST00000396033 ZKSCAN3Q9BRR0 538 aa14.18□□□□□ -0.14
ITGB1-202ENST00000396033 MYL10Q9BUA6 226 aa14.18□□□□□ -0.14
ITGB1-202ENST00000396033 AATFQ9NY61 560 aaKnown RBP eCLIP14.18□□□□□ -0.14
ITGB1-202ENST00000396033 MYH15Q9Y2K3 1946 aa14.18□□□□□ -0.14
ITGB1-202ENST00000396033 POLRMTO00411 1230 aaKnown RBP14.18□□□□□ -0.14
ITGB1-202ENST00000396033 HMGB2P26583 209 aaKnown RBP14.18□□□□□ -0.14
ITGB1-202ENST00000396033 CEBPZQ03701 1054 aaKnown RBP14.18□□□□□ -0.14
ITGB1-202ENST00000396033 OTUD7BQ6GQQ9 843 aa14.18□□□□□ -0.14
ITGB1-202ENST00000396033 ZNF804AQ7Z570 1209 aa14.18□□□□□ -0.14
ITGB1-202ENST00000396033 DZIP1Q86YF9 867 aaKnown RBP14.18□□□□□ -0.14
ITGB1-202ENST00000396033 GPR101Q96P66 508 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms