RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 HOOK1Q9UJC3 728 aaKnown RBP10□□□□□ -0.81
BDNF-204ENST00000395980 AXIN2Q9Y2T1 843 aa10□□□□□ -0.81
BDNF-204ENST00000395980 PKD1L3Q7Z443 1732 aa10□□□□□ -0.81
BDNF-204ENST00000395980 FANCGO15287 622 aa10□□□□□ -0.81
BDNF-204ENST00000395980 CASQ1P31415 396 aa10□□□□□ -0.81
BDNF-204ENST00000395980 SHC4Q6S5L8 630 aa10□□□□□ -0.81
BDNF-204ENST00000395980 MRFAP1Q9Y605 127 aa10□□□□□ -0.81
BDNF-204ENST00000395980 MYH7P12883 1935 aa10□□□□□ -0.81
BDNF-204ENST00000395980 A0A0U1RQG5 324 aaPredicted RBP10□□□□□ -0.81
BDNF-204ENST00000395980 PPFIA3O75145 1194 aa10□□□□□ -0.81
BDNF-204ENST00000395980 TBC1D8O95759 1140 aa10□□□□□ -0.81
BDNF-204ENST00000395980 CCDC102BQ68D86 513 aa10□□□□□ -0.81
BDNF-204ENST00000395980 CPLX2Q6PUV4 134 aaKnown RBP10□□□□□ -0.81
BDNF-204ENST00000395980 VPS37DQ86XT2 251 aa10□□□□□ -0.81
BDNF-204ENST00000395980 FGAP02671 866 aa9.99□□□□□ -0.81
BDNF-204ENST00000395980 KRBA2Q6ZNG9 492 aa9.99□□□□□ -0.81
BDNF-204ENST00000395980 SYTL4Q96C24 671 aaPredicted RBP9.99□□□□□ -0.81
BDNF-204ENST00000395980 MAP3K14Q99558 947 aa9.99□□□□□ -0.81
BDNF-204ENST00000395980 BAG1Q99933 345 aaPredicted RBP9.99□□□□□ -0.81
BDNF-204ENST00000395980 DACH1Q9UI36 760 aa9.99□□□□□ -0.81
BDNF-204ENST00000395980 ALG1Q9BT22 464 aa9.99□□□□□ -0.81
BDNF-204ENST00000395980 PSD3Q9NYI0 1048 aa9.99□□□□□ -0.81
BDNF-204ENST00000395980 AKAP2Q9Y2D5 859 aa9.99□□□□□ -0.81
BDNF-204ENST00000395980 TUBB4BP68371 445 aa9.99□□□□□ -0.81
BDNF-204ENST00000395980 PPP2R3AQ06190 1150 aa9.99□□□□□ -0.81
BDNF-204ENST00000395980 METTL16Q86W50 562 aaKnown RBP9.99□□□□□ -0.81
BDNF-204ENST00000395980 MSL3Q8N5Y2 521 aaKnown RBP9.99□□□□□ -0.81
BDNF-204ENST00000395980 ARFGAP3Q9NP61 516 aa9.99□□□□□ -0.81
BDNF-204ENST00000395980 MEGF6O75095 1541 aa9.99□□□□□ -0.81
BDNF-204ENST00000395980 MARCKSP29966 332 aaPredicted RBP9.98□□□□□ -0.81
BDNF-204ENST00000395980 HNRNPH2P55795 449 aaKnown RBP9.98□□□□□ -0.81
BDNF-204ENST00000395980 KRT40Q6A162 431 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 CCDC191Q8NCU4 936 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 INTS13Q9NVM9 706 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 FANCLQ9NW38 375 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 CEP126Q9P2H0 1117 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 ANGEL1Q9UNK9 670 aaKnown RBP9.98□□□□□ -0.81
BDNF-204ENST00000395980 ATRNO75882 1429 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 GTF2E1P29083 439 aaPredicted RBP9.98□□□□□ -0.81
BDNF-204ENST00000395980 PNOCQ13519 176 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 BRD3Q15059 726 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 TRIML1Q8N9V2 468 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 GOLGA1Q92805 767 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 KIFC2Q96AC6 838 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 ECM29Q5VYK3 1845 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 STK36Q9NRP7 1315 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 CCDC151A5D8V7 595 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 ZNF213O14771 459 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 ZNF18P17022 549 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 CDK11BP21127 795 aaKnown RBP9.98□□□□□ -0.81
BDNF-204ENST00000395980 GNG11P61952 73 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 TUBB2AQ13885 445 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 CT47A1Q5JQC4 288 aaPredicted RBP9.98□□□□□ -0.81
BDNF-204ENST00000395980 NT5DC1Q5TFE4 455 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 SPECC1LQ69YQ0 1117 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 MLKLQ8NB16 471 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 ENOX1Q8TC92 643 aaKnown RBP9.98□□□□□ -0.81
BDNF-204ENST00000395980 TUBB2BQ9BVA1 445 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 CCDC9Q9Y3X0 531 aaKnown RBP9.98□□□□□ -0.81
BDNF-204ENST00000395980 TMEM232C9JQI7 657 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 POTEB2H3BUK9 544 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 OAS2P29728 719 aaKnown RBP9.98□□□□□ -0.81
BDNF-204ENST00000395980 HAND2P61296 217 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 TRDNQ13061 729 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 WASHC4Q2M389 1173 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 LRRC24Q50LG9 513 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 TTC39AQ5SRH9 613 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 CNNM3Q8NE01 707 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 KCNH3Q9ULD8 1083 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 PCDHA5Q9Y5H7 936 aa9.98□□□□□ -0.81
BDNF-204ENST00000395980 ALS2Q96Q42 1657 aa9.97□□□□□ -0.81
BDNF-204ENST00000395980 SASH3O75995 380 aa9.97□□□□□ -0.81
BDNF-204ENST00000395980 METAP2P50579 478 aaKnown RBP eCLIP9.97□□□□□ -0.81
BDNF-204ENST00000395980 SMC1AQ14683 1233 aaKnown RBP9.97□□□□□ -0.81
BDNF-204ENST00000395980 TC2NQ8N9U0 490 aa9.97□□□□□ -0.81
BDNF-204ENST00000395980 BBXQ8WY36 941 aaPredicted RBP9.97□□□□□ -0.81
BDNF-204ENST00000395980 SH2B2O14492 632 aaPredicted RBP9.97□□□□□ -0.81
BDNF-204ENST00000395980 SEC31AO94979 1220 aaKnown RBP9.97□□□□□ -0.81
BDNF-204ENST00000395980 MDM2Q00987 491 aaPredicted RBP9.97□□□□□ -0.81
BDNF-204ENST00000395980 EXOC4Q96A65 974 aa9.97□□□□□ -0.81
BDNF-204ENST00000395980 WDR24Q96S15 920 aa9.97□□□□□ -0.81
BDNF-204ENST00000395980 GNL2Q13823 731 aaKnown RBP9.97□□□□□ -0.81
BDNF-204ENST00000395980 ISM2Q6H9L7 571 aa9.97□□□□□ -0.81
BDNF-204ENST00000395980 KRI1Q8N9T8 703 aaKnown RBP9.97□□□□□ -0.81
BDNF-204ENST00000395980 HNRNPLLQ8WVV9 542 aaKnown RBP9.97□□□□□ -0.81
BDNF-204ENST00000395980 TMEM87BQ96K49 555 aa9.97□□□□□ -0.81
BDNF-204ENST00000395980 AK7Q96M32 723 aa9.97□□□□□ -0.81
BDNF-204ENST00000395980 GJB4Q9NTQ9 266 aa9.97□□□□□ -0.81
BDNF-204ENST00000395980 TXLNAP40222 546 aa9.96□□□□□ -0.81
BDNF-204ENST00000395980 FKBP4Q02790 459 aaKnown RBP eCLIP9.96□□□□□ -0.81
BDNF-204ENST00000395980 TRIM29Q14134 588 aa9.96□□□□□ -0.81
BDNF-204ENST00000395980 NUTM2AQ8IVF1 878 aaPredicted RBP9.96□□□□□ -0.81
BDNF-204ENST00000395980 PANX2Q96RD6 677 aa9.96□□□□□ -0.81
BDNF-204ENST00000395980 NAA15Q9BXJ9 866 aaKnown RBP9.96□□□□□ -0.81
BDNF-204ENST00000395980 FUT8Q9BYC5 575 aa9.96□□□□□ -0.81
BDNF-204ENST00000395980 COL18A1P39060 1754 aa9.96□□□□□ -0.82
BDNF-204ENST00000395980 GPAA1O43292 621 aa9.96□□□□□ -0.82
BDNF-204ENST00000395980 LONRF3Q496Y0 759 aa9.96□□□□□ -0.82
BDNF-204ENST00000395980 ANKLE2Q86XL3 938 aa9.96□□□□□ -0.82
BDNF-204ENST00000395980 FOXP4Q8IVH2 680 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms