RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 OGFOD1Q8N543 542 aa10.55□□□□□ -0.72
CCR9-203ENST00000395963 C22orf23Q9BZE7 217 aa10.55□□□□□ -0.72
CCR9-203ENST00000395963 NDUFB9Q9Y6M9 179 aa10.55□□□□□ -0.72
CCR9-203ENST00000395963 ECM29Q5VYK3 1845 aa10.54□□□□□ -0.72
CCR9-203ENST00000395963 DCAF8L1A6NGE4 600 aa10.54□□□□□ -0.72
CCR9-203ENST00000395963 FKBP1CQ5VVH2 108 aa10.54□□□□□ -0.72
CCR9-203ENST00000395963 TTF2Q9UNY4 1162 aaKnown RBP10.54□□□□□ -0.72
CCR9-203ENST00000395963 DDX60LQ5H9U9 1706 aaKnown RBP10.54□□□□□ -0.72
CCR9-203ENST00000395963 ZKSCAN1P17029 563 aaPredicted RBP10.54□□□□□ -0.72
CCR9-203ENST00000395963 ZNF280AP59817 542 aaPredicted RBP10.54□□□□□ -0.72
CCR9-203ENST00000395963 CXCL9Q07325 125 aa10.54□□□□□ -0.72
CCR9-203ENST00000395963 CERS5Q8N5B7 392 aa10.54□□□□□ -0.72
CCR9-203ENST00000395963 TM6SF1Q9BZW5 370 aa10.54□□□□□ -0.72
CCR9-203ENST00000395963 PUS7LQ9H0K6 701 aaKnown RBP10.54□□□□□ -0.72
CCR9-203ENST00000395963 ARPP21Q9UBL0 812 aaPredicted RBP10.54□□□□□ -0.72
CCR9-203ENST00000395963 LAMB1P07942 1786 aa10.54□□□□□ -0.72
CCR9-203ENST00000395963 M0R2C6 588 aa10.53□□□□□ -0.72
CCR9-203ENST00000395963 HSPD1P10809 573 aaKnown RBP10.53□□□□□ -0.72
CCR9-203ENST00000395963 SBK1Q52WX2 424 aa10.53□□□□□ -0.72
CCR9-203ENST00000395963 AMOTL1Q8IY63 956 aa10.53□□□□□ -0.72
CCR9-203ENST00000395963 PSMD14O00487 310 aa10.53□□□□□ -0.72
CCR9-203ENST00000395963 MBD4O95243 580 aa10.53□□□□□ -0.72
CCR9-203ENST00000395963 YBX3P16989 372 aaKnown RBP eCLIP10.53□□□□□ -0.72
CCR9-203ENST00000395963 RASSF7Q02833 373 aa10.53□□□□□ -0.72
CCR9-203ENST00000395963 NECTIN1Q15223 517 aa10.53□□□□□ -0.72
CCR9-203ENST00000395963 ZNF589Q86UQ0 364 aaPredicted RBP10.53□□□□□ -0.72
CCR9-203ENST00000395963 ZNF384Q8TF68 577 aa10.53□□□□□ -0.72
CCR9-203ENST00000395963 MTA3Q9BTC8 594 aa10.53□□□□□ -0.72
CCR9-203ENST00000395963 ANAPC4Q9UJX5 808 aa10.53□□□□□ -0.72
CCR9-203ENST00000395963 DAGLAQ9Y4D2 1042 aa10.53□□□□□ -0.72
CCR9-203ENST00000395963 NAV1Q8NEY1 1877 aa10.52□□□□□ -0.72
CCR9-203ENST00000395963 HMGB1P09429 215 aaKnown RBP10.52□□□□□ -0.72
CCR9-203ENST00000395963 USP17L8P0C7I0 530 aa10.52□□□□□ -0.72
CCR9-203ENST00000395963 CRKP46108 304 aa10.52□□□□□ -0.72
CCR9-203ENST00000395963 GPR162Q16538 588 aa10.52□□□□□ -0.72
CCR9-203ENST00000395963 IMMTQ16891 758 aaKnown RBP10.52□□□□□ -0.72
CCR9-203ENST00000395963 ROBO3Q96MS0 1386 aa10.52□□□□□ -0.73
CCR9-203ENST00000395963 WDR19Q8NEZ3 1342 aa10.52□□□□□ -0.73
CCR9-203ENST00000395963 PSMA5P28066 241 aa10.52□□□□□ -0.73
CCR9-203ENST00000395963 FBXW7Q969H0 707 aa10.52□□□□□ -0.73
CCR9-203ENST00000395963 IDI2Q9BXS1 227 aa10.52□□□□□ -0.73
CCR9-203ENST00000395963 ZMYND15Q9H091 742 aa10.52□□□□□ -0.73
CCR9-203ENST00000395963 RBM8AQ9Y5S9 174 aaKnown RBP10.52□□□□□ -0.73
CCR9-203ENST00000395963 ENTPD3O75355 529 aa10.51□□□□□ -0.73
CCR9-203ENST00000395963 BTDP43251 543 aa10.51□□□□□ -0.73
CCR9-203ENST00000395963 RABEP1Q15276 862 aa10.51□□□□□ -0.73
CCR9-203ENST00000395963 ZBED3Q96IU2 234 aaPredicted RBP10.51□□□□□ -0.73
CCR9-203ENST00000395963 L3MBTL3Q96JM7 780 aaPredicted RBP10.51□□□□□ -0.73
CCR9-203ENST00000395963 RNF41Q9H4P4 317 aaPredicted RBP10.51□□□□□ -0.73
CCR9-203ENST00000395963 SLC4A4Q9Y6R1 1079 aa10.51□□□□□ -0.73
CCR9-203ENST00000395963 MYO1BO43795 1136 aa10.51□□□□□ -0.73
CCR9-203ENST00000395963 SLC3A2P08195 630 aaKnown RBP10.51□□□□□ -0.73
CCR9-203ENST00000395963 LCORLQ8N3X6 602 aa10.51□□□□□ -0.73
CCR9-203ENST00000395963 SEC62Q99442 399 aaKnown RBP10.51□□□□□ -0.73
CCR9-203ENST00000395963 NAPBQ9H115 298 aa10.51□□□□□ -0.73
CCR9-203ENST00000395963 CNNM2Q9H8M5 875 aa10.51□□□□□ -0.73
CCR9-203ENST00000395963 ZNF287Q9HBT7 754 aa10.51□□□□□ -0.73
CCR9-203ENST00000395963 TMOD2Q9NZR1 351 aa10.51□□□□□ -0.73
CCR9-203ENST00000395963 WDR90Q96KV7 1748 aa10.51□□□□□ -0.73
CCR9-203ENST00000395963 GSG1L2A8MUP6 293 aa10.5□□□□□ -0.73
CCR9-203ENST00000395963 RHBDL3P58872 404 aa10.5□□□□□ -0.73
CCR9-203ENST00000395963 GSE1Q14687 1217 aa10.5□□□□□ -0.73
CCR9-203ENST00000395963 DPY19L2Q6NUT2 758 aa10.5□□□□□ -0.73
CCR9-203ENST00000395963 ADGRA1Q86SQ6 560 aa10.5□□□□□ -0.73
CCR9-203ENST00000395963 IFNL3Q8IZI9 196 aa10.5□□□□□ -0.73
CCR9-203ENST00000395963 IL25Q9H293 177 aa10.5□□□□□ -0.73
CCR9-203ENST00000395963 DHX36Q9H2U1 1008 aaKnown RBP10.5□□□□□ -0.73
CCR9-203ENST00000395963 RNF181Q9P0P0 153 aa10.5□□□□□ -0.73
CCR9-203ENST00000395963 SCN4AP35499 1836 aa10.5□□□□□ -0.73
CCR9-203ENST00000395963 CDK5RAP2Q96SN8 1893 aa10.5□□□□□ -0.73
CCR9-203ENST00000395963 RAD17O75943 681 aa10.5□□□□□ -0.73
CCR9-203ENST00000395963 SEC24BO95487 1268 aa10.5□□□□□ -0.73
CCR9-203ENST00000395963 MCM2P49736 904 aa10.5□□□□□ -0.73
CCR9-203ENST00000395963 DLGAP5Q15398 846 aa10.5□□□□□ -0.73
CCR9-203ENST00000395963 CREB3L3Q68CJ9 461 aa10.5□□□□□ -0.73
CCR9-203ENST00000395963 ALDH8A1Q9H2A2 487 aaPredicted RBP10.5□□□□□ -0.73
CCR9-203ENST00000395963 ARMT1Q9H993 441 aa10.5□□□□□ -0.73
CCR9-203ENST00000395963 AATFQ9NY61 560 aaKnown RBP eCLIP10.5□□□□□ -0.73
CCR9-203ENST00000395963 MKRN1Q9UHC7 482 aaKnown RBP10.5□□□□□ -0.73
CCR9-203ENST00000395963 ATRNL1Q5VV63 1379 aa10.5□□□□□ -0.73
CCR9-203ENST00000395963 PITPNM2Q9BZ72 1349 aa10.5□□□□□ -0.73
CCR9-203ENST00000395963 SPDYE2BA6NHP3 402 aa10.49□□□□□ -0.73
CCR9-203ENST00000395963 ZNF213O14771 459 aa10.49□□□□□ -0.73
CCR9-203ENST00000395963 SPDYE6P0CI01 402 aa10.49□□□□□ -0.73
CCR9-203ENST00000395963 PRELPP51888 382 aa10.49□□□□□ -0.73
CCR9-203ENST00000395963 PTH1RQ03431 593 aa10.49□□□□□ -0.73
CCR9-203ENST00000395963 TNFAIP1Q13829 316 aa10.49□□□□□ -0.73
CCR9-203ENST00000395963 APOBEC3HQ6NTF7 200 aaKnown RBP10.49□□□□□ -0.73
CCR9-203ENST00000395963 FAM83AQ86UY5 434 aa10.49□□□□□ -0.73
CCR9-203ENST00000395963 KIAA0825Q8IV33 1275 aa10.49□□□□□ -0.73
CCR9-203ENST00000395963 TEX11Q8IYF3 940 aa10.49□□□□□ -0.73
CCR9-203ENST00000395963 FBXL16Q8N461 479 aa10.49□□□□□ -0.73
CCR9-203ENST00000395963 EHD4Q9H223 541 aa10.49□□□□□ -0.73
CCR9-203ENST00000395963 PPP2R3BQ9Y5P8 575 aa10.49□□□□□ -0.73
CCR9-203ENST00000395963 H7C1D1 291 aa10.49□□□□□ -0.73
CCR9-203ENST00000395963 SLC27A2O14975 620 aa10.49□□□□□ -0.73
CCR9-203ENST00000395963 FGAP02671 866 aa10.49□□□□□ -0.73
CCR9-203ENST00000395963 USP5P45974 858 aa10.49□□□□□ -0.73
CCR9-203ENST00000395963 TDO2P48775 406 aa10.49□□□□□ -0.73
CCR9-203ENST00000395963 DIXDC1Q155Q3 683 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms