RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 IRX2Q9BZI1 471 aaPredicted RBP11.05□□□□□ -0.64
CDRT1-204ENST00000395906 VIPAS39Q9H9C1 493 aa11.05□□□□□ -0.64
CDRT1-204ENST00000395906 LMCD1Q9NZU5 365 aa11.05□□□□□ -0.64
CDRT1-204ENST00000395906 NWD1Q149M9 1564 aa11.05□□□□□ -0.64
CDRT1-204ENST00000395906 IL16Q14005 1332 aa11.05□□□□□ -0.64
CDRT1-204ENST00000395906 CDHR2Q9BYE9 1310 aa11.05□□□□□ -0.64
CDRT1-204ENST00000395906 NRKQ7Z2Y5 1582 aa11.05□□□□□ -0.64
CDRT1-204ENST00000395906 PYGLP06737 847 aa11.05□□□□□ -0.64
CDRT1-204ENST00000395906 IRAK1P51617 712 aa11.05□□□□□ -0.64
CDRT1-204ENST00000395906 ACTN3Q08043 901 aaPredicted RBP11.05□□□□□ -0.64
CDRT1-204ENST00000395906 CHRNA2Q15822 529 aa11.05□□□□□ -0.64
CDRT1-204ENST00000395906 CEP57Q86XR8 500 aa11.05□□□□□ -0.64
CDRT1-204ENST00000395906 LRRC59Q96AG4 307 aaKnown RBP11.05□□□□□ -0.64
CDRT1-204ENST00000395906 GOPCQ9HD26 462 aa11.05□□□□□ -0.64
CDRT1-204ENST00000395906 AXIN2Q9Y2T1 843 aa11.05□□□□□ -0.64
CDRT1-204ENST00000395906 RASSF9O75901 435 aa11.04□□□□□ -0.64
CDRT1-204ENST00000395906 TUBBP07437 444 aa11.04□□□□□ -0.64
CDRT1-204ENST00000395906 HOXC9P31274 260 aa11.04□□□□□ -0.64
CDRT1-204ENST00000395906 CHMP4BP1P59074 171 aa11.04□□□□□ -0.64
CDRT1-204ENST00000395906 SNCBQ16143 134 aa11.04□□□□□ -0.64
CDRT1-204ENST00000395906 KIF4BQ2VIQ3 1234 aa11.04□□□□□ -0.64
CDRT1-204ENST00000395906 AMOTQ4VCS5 1084 aa11.04□□□□□ -0.64
CDRT1-204ENST00000395906 OTUD7AQ8TE49 926 aaPredicted RBP11.04□□□□□ -0.64
CDRT1-204ENST00000395906 ARHGAP45Q92619 1136 aa11.04□□□□□ -0.64
CDRT1-204ENST00000395906 RSRC1Q96IZ7 334 aaKnown RBP11.04□□□□□ -0.64
CDRT1-204ENST00000395906 BLOC1S6Q9UL45 172 aa11.04□□□□□ -0.64
CDRT1-204ENST00000395906 ANKRD26Q9UPS8 1709 aa11.04□□□□□ -0.64
CDRT1-204ENST00000395906 GOLGA6L9A6NEM1 432 aa11.04□□□□□ -0.64
CDRT1-204ENST00000395906 CDR1P51861 262 aa11.04□□□□□ -0.64
CDRT1-204ENST00000395906 KCNB1Q14721 858 aa11.04□□□□□ -0.64
CDRT1-204ENST00000395906 TTLL7Q6ZT98 887 aa11.04□□□□□ -0.64
CDRT1-204ENST00000395906 TMC6Q7Z403 805 aa11.04□□□□□ -0.64
CDRT1-204ENST00000395906 SRGAP1Q7Z6B7 1085 aa11.04□□□□□ -0.64
CDRT1-204ENST00000395906 DHX40Q8IX18 779 aaKnown RBP11.04□□□□□ -0.64
CDRT1-204ENST00000395906 BCAS4Q8TDM0 211 aa11.04□□□□□ -0.64
CDRT1-204ENST00000395906 EYA1Q99502 592 aa11.04□□□□□ -0.64
CDRT1-204ENST00000395906 EP400Q96L91 3159 aa11.03□□□□□ -0.64
CDRT1-204ENST00000395906 GOLGB1Q14789 3259 aaKnown RBP11.03□□□□□ -0.64
CDRT1-204ENST00000395906 ENO4A6NNW6 628 aa11.03□□□□□ -0.64
CDRT1-204ENST00000395906 H7C1W4 665 aa11.03□□□□□ -0.64
CDRT1-204ENST00000395906 MEFVO15553 781 aaPredicted RBP11.03□□□□□ -0.64
CDRT1-204ENST00000395906 MYSM1Q5VVJ2 828 aa11.03□□□□□ -0.64
CDRT1-204ENST00000395906 EZH1Q92800 747 aaPredicted RBP11.03□□□□□ -0.64
CDRT1-204ENST00000395906 SCAND2PQ9GZW5 306 aaPredicted RBP11.03□□□□□ -0.64
CDRT1-204ENST00000395906 SUGCTQ9HAC7 445 aa11.03□□□□□ -0.64
CDRT1-204ENST00000395906 TRIM35Q9UPQ4 493 aa11.03□□□□□ -0.64
CDRT1-204ENST00000395906 USP31Q70CQ4 1352 aa11.03□□□□□ -0.64
CDRT1-204ENST00000395906 FCHSD2O94868 740 aa11.03□□□□□ -0.64
CDRT1-204ENST00000395906 SYF2O95926 243 aaKnown RBP11.03□□□□□ -0.64
CDRT1-204ENST00000395906 IBSPP21815 317 aaPredicted RBP11.03□□□□□ -0.64
CDRT1-204ENST00000395906 CCDC40Q4G0X9 1142 aa11.03□□□□□ -0.64
CDRT1-204ENST00000395906 SPATA21Q7Z572 469 aa11.03□□□□□ -0.64
CDRT1-204ENST00000395906 YTHDF3Q7Z739 585 aaKnown RBP11.03□□□□□ -0.64
CDRT1-204ENST00000395906 PNKPQ96T60 521 aa11.03□□□□□ -0.64
CDRT1-204ENST00000395906 KAT14Q9H8E8 782 aa11.03□□□□□ -0.64
CDRT1-204ENST00000395906 LIMCH1Q9UPQ0 1083 aa11.03□□□□□ -0.64
CDRT1-204ENST00000395906 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.03□□□□□ -0.64
CDRT1-204ENST00000395906 VWA3AA6NCI4 1184 aa11.02□□□□□ -0.65
CDRT1-204ENST00000395906 AHCYL1O43865 530 aa11.02□□□□□ -0.65
CDRT1-204ENST00000395906 NR1I2O75469 434 aa11.02□□□□□ -0.65
CDRT1-204ENST00000395906 SLC8A1P32418 973 aa11.02□□□□□ -0.65
CDRT1-204ENST00000395906 GNG11P61952 73 aa11.02□□□□□ -0.65
CDRT1-204ENST00000395906 PIP4K2BP78356 416 aa11.02□□□□□ -0.65
CDRT1-204ENST00000395906 KIRREL3Q8IZU9 778 aa11.02□□□□□ -0.65
CDRT1-204ENST00000395906 IGSF22Q8N9C0 903 aa11.02□□□□□ -0.65
CDRT1-204ENST00000395906 PLEKHG4BQ96PX9 1271 aa11.02□□□□□ -0.65
CDRT1-204ENST00000395906 VCPKMTQ9H867 229 aa11.02□□□□□ -0.65
CDRT1-204ENST00000395906 XIRP1Q702N8 1843 aaKnown RBP11.02□□□□□ -0.65
CDRT1-204ENST00000395906 PEAK1Q9H792 1746 aa11.02□□□□□ -0.65
CDRT1-204ENST00000395906 FESP07332 822 aa11.02□□□□□ -0.65
CDRT1-204ENST00000395906 PYGBP11216 843 aa11.02□□□□□ -0.65
CDRT1-204ENST00000395906 GJB2P29033 226 aa11.02□□□□□ -0.65
CDRT1-204ENST00000395906 LAMB3Q13751 1172 aa11.02□□□□□ -0.65
CDRT1-204ENST00000395906 ZRSR2Q15696 482 aaKnown RBP11.02□□□□□ -0.65
CDRT1-204ENST00000395906 MICALCLQ6ZW33 695 aa11.02□□□□□ -0.65
CDRT1-204ENST00000395906 BRAPQ7Z569 592 aa11.02□□□□□ -0.65
CDRT1-204ENST00000395906 MFN1Q8IWA4 741 aa11.02□□□□□ -0.65
CDRT1-204ENST00000395906 TMTC2Q8N394 836 aa11.02□□□□□ -0.65
CDRT1-204ENST00000395906 FAM76AQ8TAV0 307 aa11.02□□□□□ -0.65
CDRT1-204ENST00000395906 HOOK2Q96ED9 719 aa11.02□□□□□ -0.65
CDRT1-204ENST00000395906 WDR24Q96S15 920 aa11.02□□□□□ -0.65
CDRT1-204ENST00000395906 MAF1Q9H063 256 aa11.02□□□□□ -0.65
CDRT1-204ENST00000395906 VPS37CA5D8V6 355 aaPredicted RBP11.01□□□□□ -0.65
CDRT1-204ENST00000395906 LRRIQ3A6PVS8 624 aaPredicted RBP11.01□□□□□ -0.65
CDRT1-204ENST00000395906 EIF3HO15372 352 aaKnown RBP eCLIP11.01□□□□□ -0.65
CDRT1-204ENST00000395906 PPFIA1Q13136 1202 aa11.01□□□□□ -0.65
CDRT1-204ENST00000395906 CAPRIN2Q6IMN6 1127 aaKnown RBP11.01□□□□□ -0.65
CDRT1-204ENST00000395906 ARHGEF1Q92888 912 aaKnown RBP11.01□□□□□ -0.65
CDRT1-204ENST00000395906 KIFC2Q96AC6 838 aa11.01□□□□□ -0.65
CDRT1-204ENST00000395906 DHX58Q96C10 678 aa11.01□□□□□ -0.65
CDRT1-204ENST00000395906 CENPHQ9H3R5 247 aa11.01□□□□□ -0.65
CDRT1-204ENST00000395906 ANO2Q9NQ90 1003 aa11.01□□□□□ -0.65
CDRT1-204ENST00000395906 ELL2O00472 640 aaPredicted RBP11.01□□□□□ -0.65
CDRT1-204ENST00000395906 CUTAO60888 179 aa11.01□□□□□ -0.65
CDRT1-204ENST00000395906 WDHD1O75717 1129 aaPredicted RBP11.01□□□□□ -0.65
CDRT1-204ENST00000395906 MCM10Q7L590 875 aa11.01□□□□□ -0.65
CDRT1-204ENST00000395906 PARP9Q8IXQ6 854 aa11.01□□□□□ -0.65
CDRT1-204ENST00000395906 SPATA32Q96LK8 384 aa11.01□□□□□ -0.65
CDRT1-204ENST00000395906 ZNF396Q96N95 335 aaPredicted RBP11.01□□□□□ -0.65
CDRT1-204ENST00000395906 ANO10Q9NW15 660 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms