RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 ARL1P40616 181 aaPredicted RBP6.13□□□□□ -1.43
VPS13C-204ENST00000395898 ARID5AQ03989 594 aa6.13□□□□□ -1.43
VPS13C-204ENST00000395898 TRAPPC3LQ5T215 181 aa6.13□□□□□ -1.43
VPS13C-204ENST00000395898 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.13□□□□□ -1.43
VPS13C-204ENST00000395898 CCDC63Q8NA47 563 aa6.13□□□□□ -1.43
VPS13C-204ENST00000395898 EEF2P13639 858 aaKnown RBP6.13□□□□□ -1.43
VPS13C-204ENST00000395898 MYL5Q02045 173 aa6.13□□□□□ -1.43
VPS13C-204ENST00000395898 WDR44Q5JSH3 913 aa6.13□□□□□ -1.43
VPS13C-204ENST00000395898 ANGEL1Q9UNK9 670 aaKnown RBP6.13□□□□□ -1.43
VPS13C-204ENST00000395898 IQSEC3Q9UPP2 1182 aaPredicted RBP6.13□□□□□ -1.43
VPS13C-204ENST00000395898 SBNO1A3KN83 1393 aa6.13□□□□□ -1.43
VPS13C-204ENST00000395898 RPS6KB1P23443 525 aa6.13□□□□□ -1.43
VPS13C-204ENST00000395898 ALDH3A1P30838 453 aa6.13□□□□□ -1.43
VPS13C-204ENST00000395898 MXRA7P84157 204 aa6.13□□□□□ -1.43
VPS13C-204ENST00000395898 IMPACTQ9P2X3 320 aa6.13□□□□□ -1.43
VPS13C-204ENST00000395898 AKR1B15C9JRZ8 316 aaPredicted RBP6.13□□□□□ -1.43
VPS13C-204ENST00000395898 CALUO43852 315 aaPredicted RBP6.13□□□□□ -1.43
VPS13C-204ENST00000395898 PDE8AO60658 829 aa6.13□□□□□ -1.43
VPS13C-204ENST00000395898 PPP1R7Q15435 360 aa6.13□□□□□ -1.43
VPS13C-204ENST00000395898 CFAP58Q5T655 872 aa6.13□□□□□ -1.43
VPS13C-204ENST00000395898 CHST3Q7LGC8 479 aa6.13□□□□□ -1.43
VPS13C-204ENST00000395898 MIGA1Q8NAN2 632 aa6.13□□□□□ -1.43
VPS13C-204ENST00000395898 LZTS2Q9BRK4 669 aa6.13□□□□□ -1.43
VPS13C-204ENST00000395898 SWAP70Q9UH65 585 aa6.13□□□□□ -1.43
VPS13C-204ENST00000395898 PA2G4Q9UQ80 394 aaKnown RBP6.13□□□□□ -1.43
VPS13C-204ENST00000395898 ZBTB16Q05516 673 aa6.13□□□□□ -1.43
VPS13C-204ENST00000395898 CALCOCO2Q13137 446 aa6.13□□□□□ -1.43
VPS13C-204ENST00000395898 HSP90AA4PQ58FG1 418 aa6.13□□□□□ -1.43
VPS13C-204ENST00000395898 BAG1Q99933 345 aaPredicted RBP6.13□□□□□ -1.43
VPS13C-204ENST00000395898 METTL22Q9BUU2 404 aaPredicted RBP6.13□□□□□ -1.43
VPS13C-204ENST00000395898 NPC1L1Q9UHC9 1359 aa6.13□□□□□ -1.43
VPS13C-204ENST00000395898 ATP7AQ04656 1500 aa6.13□□□□□ -1.43
VPS13C-204ENST00000395898 FBLN1P23142 703 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 ARID4AP29374 1257 aaPredicted RBP6.12□□□□□ -1.43
VPS13C-204ENST00000395898 PRIM1P49642 420 aaKnown RBP6.12□□□□□ -1.43
VPS13C-204ENST00000395898 CWF19L2Q2TBE0 894 aaKnown RBP6.12□□□□□ -1.43
VPS13C-204ENST00000395898 FAM212AQ96EL1 285 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 PICK1Q9NRD5 415 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 KCNG1Q9UIX4 513 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 UBAP1LF5GYI3 381 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 SKAP1Q86WV1 359 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 RGS22Q8NE09 1264 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 PSMD1Q99460 953 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 AGTPBP1Q9UPW5 1226 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 ZMYM3Q14202 1370 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 STX10O60499 249 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 CA8P35219 290 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 BRDTQ58F21 947 aaPredicted RBP6.12□□□□□ -1.43
VPS13C-204ENST00000395898 APPBP2Q92624 585 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 TRIM7Q9C029 511 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 A0A1B0GUL7 405 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 TICAM2Q86XR7 235 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 OTUD6BQ8N6M0 293 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 TCEANC2Q96MN5 208 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 COL17A1Q9UMD9 1497 aaPredicted RBP6.12□□□□□ -1.43
VPS13C-204ENST00000395898 GUCA1BQ9UMX6 200 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 TRAPPC8Q9Y2L5 1435 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 VWA3AA6NCI4 1184 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 ACTN4O43707 911 aaKnown RBP6.12□□□□□ -1.43
VPS13C-204ENST00000395898 HOXC9P31274 260 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 UTP11Q9Y3A2 253 aaKnown RBP6.12□□□□□ -1.43
VPS13C-204ENST00000395898 DCAF17Q5H9S7 520 aaPredicted RBP6.12□□□□□ -1.43
VPS13C-204ENST00000395898 SEL1L2Q5TEA6 688 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 EYA1Q99502 592 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 SHROOM2Q13796 1616 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 PPFIA3O75145 1194 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 MNAT1P51948 309 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 C8orf34Q49A92 452 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 IFT74Q96LB3 600 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 CLEC11AQ9Y240 323 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 EBAG9O00559 213 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 BACH1O14867 736 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 ZBTB7BO15156 539 aaPredicted RBP6.12□□□□□ -1.43
VPS13C-204ENST00000395898 ITGA6P23229 1130 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 CCDC117Q8IWD4 279 aaPredicted RBP6.12□□□□□ -1.43
VPS13C-204ENST00000395898 FAM169AQ9Y6X4 670 aa6.12□□□□□ -1.43
VPS13C-204ENST00000395898 MROH5Q6ZUA9 1318 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 MSL1Q68DK7 614 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 HDXQ7Z353 690 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 NOC4LQ9BVI4 516 aaKnown RBP6.11□□□□□ -1.43
VPS13C-204ENST00000395898 USP26Q9BXU7 913 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 EXOC7Q9UPT5 735 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 HIBADHP31937 336 aaKnown RBP6.11□□□□□ -1.43
VPS13C-204ENST00000395898 INF2Q27J81 1249 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 CYP26C1Q6V0L0 522 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 TEX11Q8IYF3 940 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 CNBD1Q8NA66 436 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 SMC1BQ8NDV3 1235 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 IFNKQ9P0W0 207 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 CPLX4Q7Z7G2 160 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 CCDC110Q8TBZ0 833 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 ATRIPQ8WXE1 791 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 BCRP11274 1271 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 CAPN2P17655 700 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 FAM160A1Q05DH4 1040 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 LETM2Q2VYF4 491 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 MCTP2Q6DN12 878 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 UBL4BQ8N7F7 174 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 STRN3Q13033 797 aa6.11□□□□□ -1.43
VPS13C-204ENST00000395898 TAF12Q16514 161 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms