RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 TBC1D2Q9BYX2 928 aa24.31■■□□□ 1.48
VCPKMT-202ENST00000395860 UPF3BQ9BZI7 483 aaKnown RBP24.31■■□□□ 1.48
VCPKMT-202ENST00000395860 TM6SF1Q9BZW5 370 aa24.31■■□□□ 1.48
VCPKMT-202ENST00000395860 EPB41L4AQ9HCS5 686 aaPredicted RBP24.31■■□□□ 1.48
VCPKMT-202ENST00000395860 TAF6LQ9Y6J9 622 aa24.31■■□□□ 1.48
VCPKMT-202ENST00000395860 BAZ2AQ9UIF9 1905 aaKnown RBP24.31■■□□□ 1.48
VCPKMT-202ENST00000395860 PSMA5P28066 241 aa24.31■■□□□ 1.48
VCPKMT-202ENST00000395860 SDR42E1Q8WUS8 393 aa24.31■■□□□ 1.48
VCPKMT-202ENST00000395860 CRNKL1Q9BZJ0 848 aaKnown RBP24.31■■□□□ 1.48
VCPKMT-202ENST00000395860 LTBP3Q9NS15 1303 aa24.3■■□□□ 1.48
VCPKMT-202ENST00000395860 ZNF213O14771 459 aa24.3■■□□□ 1.48
VCPKMT-202ENST00000395860 TDO2P48775 406 aa24.3■■□□□ 1.48
VCPKMT-202ENST00000395860 FAM163AQ96GL9 167 aaPredicted RBP24.3■■□□□ 1.48
VCPKMT-202ENST00000395860 CDK5RAP2Q96SN8 1893 aa24.3■■□□□ 1.48
VCPKMT-202ENST00000395860 SYT17Q9BSW7 474 aa24.3■■□□□ 1.48
VCPKMT-202ENST00000395860 HAND2P61296 217 aa24.29■■□□□ 1.48
VCPKMT-202ENST00000395860 CERS3Q8IU89 383 aa24.29■■□□□ 1.48
VCPKMT-202ENST00000395860 IL27Q8NEV9 243 aa24.29■■□□□ 1.48
VCPKMT-202ENST00000395860 ZNRF3Q9ULT6 936 aa24.29■■□□□ 1.48
VCPKMT-202ENST00000395860 GAKO14976 1311 aa24.29■■□□□ 1.48
VCPKMT-202ENST00000395860 ADAMTSL1Q8N6G6 1762 aa24.29■■□□□ 1.48
VCPKMT-202ENST00000395860 GPR75-ASB3A0A0A6YYF3 556 aa24.29■■□□□ 1.48
VCPKMT-202ENST00000395860 CD2BP2O95400 341 aaKnown RBP24.29■■□□□ 1.48
VCPKMT-202ENST00000395860 BTDP43251 543 aa24.29■■□□□ 1.48
VCPKMT-202ENST00000395860 PPP4CP60510 307 aa24.29■■□□□ 1.48
VCPKMT-202ENST00000395860 JDP2Q8WYK2 163 aa24.29■■□□□ 1.48
VCPKMT-202ENST00000395860 CYP46A1Q9Y6A2 500 aa24.29■■□□□ 1.48
VCPKMT-202ENST00000395860 SLC4A3P48751 1232 aa24.28■■□□□ 1.48
VCPKMT-202ENST00000395860 KIAA0825Q8IV33 1275 aa24.28■■□□□ 1.48
VCPKMT-202ENST00000395860 ZSWIM6Q9HCJ5 1215 aa24.28■■□□□ 1.48
VCPKMT-202ENST00000395860 SCNN1DP51172 638 aa24.27■■□□□ 1.48
VCPKMT-202ENST00000395860 RASSF7Q02833 373 aa24.27■■□□□ 1.48
VCPKMT-202ENST00000395860 NEK1Q96PY6 1258 aa24.27■■□□□ 1.48
VCPKMT-202ENST00000395860 DAGLAQ9Y4D2 1042 aa24.27■■□□□ 1.48
VCPKMT-202ENST00000395860 E7EWF7 191 aa24.26■■□□□ 1.47
VCPKMT-202ENST00000395860 RAD17O75943 681 aa24.26■■□□□ 1.47
VCPKMT-202ENST00000395860 PLCG2P16885 1265 aa24.26■■□□□ 1.47
VCPKMT-202ENST00000395860 BLOC1S2Q6QNY1 142 aa24.26■■□□□ 1.47
VCPKMT-202ENST00000395860 RUFY3Q7L099 469 aa24.26■■□□□ 1.47
VCPKMT-202ENST00000395860 SH3RF3Q8TEJ3 882 aaPredicted RBP24.26■■□□□ 1.47
VCPKMT-202ENST00000395860 NAV1Q8NEY1 1877 aa24.26■■□□□ 1.47
VCPKMT-202ENST00000395860 CPA1P15085 419 aa24.26■■□□□ 1.47
VCPKMT-202ENST00000395860 GIMAP6Q6P9H5 292 aa24.26■■□□□ 1.47
VCPKMT-202ENST00000395860 STOX1Q6ZVD7 989 aa24.26■■□□□ 1.47
VCPKMT-202ENST00000395860 TEKT1Q969V4 418 aa24.26■■□□□ 1.47
VCPKMT-202ENST00000395860 ATP8A2Q9NTI2 1148 aa24.26■■□□□ 1.47
VCPKMT-202ENST00000395860 LAMB1P07942 1786 aa24.26■■□□□ 1.47
VCPKMT-202ENST00000395860 MYO3BQ8WXR4 1341 aa24.25■■□□□ 1.47
VCPKMT-202ENST00000395860 PSMD14O00487 310 aa24.25■■□□□ 1.47
VCPKMT-202ENST00000395860 HHIPL2Q6UWX4 724 aa24.25■■□□□ 1.47
VCPKMT-202ENST00000395860 FOCADQ5VW36 1801 aa24.25■■□□□ 1.47
VCPKMT-202ENST00000395860 GOLGB1Q14789 3259 aaKnown RBP24.25■■□□□ 1.47
VCPKMT-202ENST00000395860 ECM29Q5VYK3 1845 aa24.24■■□□□ 1.47
VCPKMT-202ENST00000395860 USP5P45974 858 aa24.24■■□□□ 1.47
VCPKMT-202ENST00000395860 RSBN1LQ6PCB5 846 aaPredicted RBP24.24■■□□□ 1.47
VCPKMT-202ENST00000395860 TIAM2Q8IVF5 1701 aa24.24■■□□□ 1.47
VCPKMT-202ENST00000395860 K7ELQ4 463 aaPredicted RBP24.24■■□□□ 1.47
VCPKMT-202ENST00000395860 VIL1P09327 827 aaKnown RBP24.24■■□□□ 1.47
VCPKMT-202ENST00000395860 CRKP46108 304 aa24.24■■□□□ 1.47
VCPKMT-202ENST00000395860 DCP1AQ9NPI6 582 aaPredicted RBP24.24■■□□□ 1.47
VCPKMT-202ENST00000395860 PDRG1Q9NUG6 133 aa24.24■■□□□ 1.47
VCPKMT-202ENST00000395860 HMGB1P09429 215 aaKnown RBP24.23■■□□□ 1.47
VCPKMT-202ENST00000395860 MCM2P49736 904 aa24.23■■□□□ 1.47
VCPKMT-202ENST00000395860 HDLBPQ00341 1268 aaKnown RBP24.23■■□□□ 1.47
VCPKMT-202ENST00000395860 ARHGAP27Q6ZUM4 889 aa24.23■■□□□ 1.47
VCPKMT-202ENST00000395860 TTC14Q96N46 770 aa24.23■■□□□ 1.47
VCPKMT-202ENST00000395860 MRIQ9BWK5 157 aa24.23■■□□□ 1.47
VCPKMT-202ENST00000395860 RPS6KB1P23443 525 aa24.22■■□□□ 1.47
VCPKMT-202ENST00000395860 TEX11Q8IYF3 940 aa24.22■■□□□ 1.47
VCPKMT-202ENST00000395860 NBPF3Q9H094 633 aa24.22■■□□□ 1.47
VCPKMT-202ENST00000395860 DICER1Q9UPY3 1922 aaKnown RBP24.22■■□□□ 1.47
VCPKMT-202ENST00000395860 MINDY4BA8MYZ0 360 aa24.21■■□□□ 1.47
VCPKMT-202ENST00000395860 CXCL9Q07325 125 aa24.21■■□□□ 1.47
VCPKMT-202ENST00000395860 PPARAQ07869 468 aa24.21■■□□□ 1.47
VCPKMT-202ENST00000395860 TBC1D10CQ8IV04 446 aa24.21■■□□□ 1.47
VCPKMT-202ENST00000395860 TGFBRAP1Q8WUH2 860 aa24.21■■□□□ 1.47
VCPKMT-202ENST00000395860 RBM5P52756 815 aaKnown RBP eCLIP24.21■■□□□ 1.47
VCPKMT-202ENST00000395860 RHBDL3P58872 404 aa24.21■■□□□ 1.47
VCPKMT-202ENST00000395860 CTDSPL2Q05D32 466 aa24.21■■□□□ 1.47
VCPKMT-202ENST00000395860 CIAPIN1Q6FI81 312 aa24.21■■□□□ 1.47
VCPKMT-202ENST00000395860 NCOA7Q8NI08 942 aa24.21■■□□□ 1.47
VCPKMT-202ENST00000395860 MYH1P12882 1939 aa24.2■■□□□ 1.46
VCPKMT-202ENST00000395860 PRELPP51888 382 aa24.2■■□□□ 1.46
VCPKMT-202ENST00000395860 AK2P54819 239 aa24.2■■□□□ 1.46
VCPKMT-202ENST00000395860 TRDNQ13061 729 aa24.2■■□□□ 1.46
VCPKMT-202ENST00000395860 COL9A3Q14050 684 aaPredicted RBP24.2■■□□□ 1.46
VCPKMT-202ENST00000395860 CTR9Q6PD62 1173 aa24.2■■□□□ 1.46
VCPKMT-202ENST00000395860 NOL8Q76FK4 1167 aaKnown RBP24.2■■□□□ 1.46
VCPKMT-202ENST00000395860 ZDHHC15Q96MV8 337 aa24.2■■□□□ 1.46
VCPKMT-202ENST00000395860 ARPP21Q9UBL0 812 aaPredicted RBP24.2■■□□□ 1.46
VCPKMT-202ENST00000395860 SERPINA10Q9UK55 444 aa24.2■■□□□ 1.46
VCPKMT-202ENST00000395860 SBF1O95248 1867 aa24.2■■□□□ 1.46
VCPKMT-202ENST00000395860 RALYLQ86SE5 291 aaKnown RBP24.19■■□□□ 1.46
VCPKMT-202ENST00000395860 MCM9Q9NXL9 1143 aa24.19■■□□□ 1.46
VCPKMT-202ENST00000395860 USP17L12C9JPN9 530 aa24.19■■□□□ 1.46
VCPKMT-202ENST00000395860 USP17L21D6R901 530 aa24.19■■□□□ 1.46
VCPKMT-202ENST00000395860 TNIP1Q15025 636 aa24.19■■□□□ 1.46
VCPKMT-202ENST00000395860 DHX32Q7L7V1 743 aaKnown RBP24.19■■□□□ 1.46
VCPKMT-202ENST00000395860 TCEANC2Q96MN5 208 aa24.19■■□□□ 1.46
VCPKMT-202ENST00000395860 HDAC9Q9UKV0 1011 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms